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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3148050..3149372+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005258-T1 ID=KYF_005258-T1|Name=KYF_005258-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1323bp|location=Sequence derived from alignment at ch4:3148050..3149372+ (Aspergillus niger KYF3)
ATGTCTGTCTTCAAGGCATCATTCCTATTTCTTCTTTCCTCCTCACTAGT
CCACGGGGTTCCACACTCCAGCAGAGCATCTCGGAGCCAACAATGCGTGG
TTCCGTCCAAATACCAGGCATCGAATGGGATGGCTGATGACTCGGCTGCT
GTCTCCCAGGCCTTTGCACAATGCGCGACTGACTCGGTTATTATTTTCGA
GGAGGGTGTCAACTATAACATCTTTCAGCCGATCACCGCCACCAACCTCA
GCAATGTGGAAATCCGGATGCACGGCAACCTGCATCTGCCACAGAATATC
ACTGCGGTGCAGAATATAGTCAGTGACGGTACTTCTACATGGTTTACCCT
AGAAGGACCAAAAGTGGACTGGATTGGTCCTGAAGACGTGAACAATGGTT
GGATTGACTCGTACGGACAACCGTGGTGGGATGCGAACCCTGCAGGTAGT
TCAGGCATCGATAACCGTCCGCATCTCATGAGCTTCAAGTCTAGCCAAGC
CACTATGAAATACTTCAGGTCTAGGAAGCCCATCGCCTGGAATGTCAAAC
TGCATGGACAAGACATTACAGTCAGCCACGCTATTATCGACGCTACCTCG
ACAGGTAGCTTCCCATTCAACACTGACGGTTTCGATGTTGAGGGTACCAA
TATCCAGATCACCGACAGTATCATGTACAACGGCGACGATGCGATTGCAG
TAGGCGCGGACTCGCACGACATACTTTTCACAAGAAACACCATCGGCTAC
CAGACTCACGGCATGAGCATTGGATCGCTGGGAAAGGATCCCACAGACTT
CGCCAATATCAGCAACATCCGCTTTGACGATGTGACTGTTGTCGATGGGC
TCTACGCAGCACGCTTCAAGTCATGGAGCGGAGGGACCGGACTCGTCAAG
AATGTGACCTGGAACAATATTAGAGTCTTCAACGTGACGTTCCCGATCTT
TGTGACTCAGAGTTATAGCGACCAAGGCGCCTCCCGGTCTGGAACTGTCA
ATGCTAGTTCGGCTGTGATGATGGAGGATTTTACCTGGTCTGACTTTGCT
GGCTCGATCAATACGTACCAGCCTGGTGACGGTTCTTGCGTTTCCGACCC
TTGCTGGTACAACGTTGGGCTGCCAAATTTGAAGCATACGGAGGCCCTCA
TTATCGAATGCCATACTGCTCAATCTTGTAAGAACTTTGTGACGGACAAC
ATCCAGCTATACCCGCAGGTTCTGGAACCAGCGAGTGTGATCTGCATGAA
CGCAACGGCAGCCCTCAATCCTGATCTTGGATTTACATGTAAAAACGGGA
CCTACAGCCCATTATCTAATTAA back to topCoding sequence (CDS) from alignment at ch4:3148050..3149372+ >KYF_005258-T1 ID=KYF_005258-T1|Name=KYF_005258-T1|organism=Aspergillus niger KYF3|type=CDS|length=1323bp|location=Sequence derived from alignment at ch4:3148050..3149372+ (Aspergillus niger KYF3)
ATGTCTGTCTTCAAGGCATCATTCCTATTTCTTCTTTCCTCCTCACTAGT
CCACGGGGTTCCACACTCCAGCAGAGCATCTCGGAGCCAACAATGCGTGG
TTCCGTCCAAATACCAGGCATCGAATGGGATGGCTGATGACTCGGCTGCT
GTCTCCCAGGCCTTTGCACAATGCGCGACTGACTCGGTTATTATTTTCGA
GGAGGGTGTCAACTATAACATCTTTCAGCCGATCACCGCCACCAACCTCA
GCAATGTGGAAATCCGGATGCACGGCAACCTGCATCTGCCACAGAATATC
ACTGCGGTGCAGAATATAGTCAGTGACGGTACTTCTACATGGTTTACCCT
AGAAGGACCAAAAGTGGACTGGATTGGTCCTGAAGACGTGAACAATGGTT
GGATTGACTCGTACGGACAACCGTGGTGGGATGCGAACCCTGCAGGTAGT
TCAGGCATCGATAACCGTCCGCATCTCATGAGCTTCAAGTCTAGCCAAGC
CACTATGAAATACTTCAGGTCTAGGAAGCCCATCGCCTGGAATGTCAAAC
TGCATGGACAAGACATTACAGTCAGCCACGCTATTATCGACGCTACCTCG
ACAGGTAGCTTCCCATTCAACACTGACGGTTTCGATGTTGAGGGTACCAA
TATCCAGATCACCGACAGTATCATGTACAACGGCGACGATGCGATTGCAG
TAGGCGCGGACTCGCACGACATACTTTTCACAAGAAACACCATCGGCTAC
CAGACTCACGGCATGAGCATTGGATCGCTGGGAAAGGATCCCACAGACTT
CGCCAATATCAGCAACATCCGCTTTGACGATGTGACTGTTGTCGATGGGC
TCTACGCAGCACGCTTCAAGTCATGGAGCGGAGGGACCGGACTCGTCAAG
AATGTGACCTGGAACAATATTAGAGTCTTCAACGTGACGTTCCCGATCTT
TGTGACTCAGAGTTATAGCGACCAAGGCGCCTCCCGGTCTGGAACTGTCA
ATGCTAGTTCGGCTGTGATGATGGAGGATTTTACCTGGTCTGACTTTGCT
GGCTCGATCAATACGTACCAGCCTGGTGACGGTTCTTGCGTTTCCGACCC
TTGCTGGTACAACGTTGGGCTGCCAAATTTGAAGCATACGGAGGCCCTCA
TTATCGAATGCCATACTGCTCAATCTTGTAAGAACTTTGTGACGGACAAC
ATCCAGCTATACCCGCAGGTTCTGGAACCAGCGAGTGTGATCTGCATGAA
CGCAACGGCAGCCCTCAATCCTGATCTTGGATTTACATGTAAAAACGGGA
CCTACAGCCCATTATCTAATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Note | CAZy:GH28 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR000743 |
| DBxref | PFAM:PF00295 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3148050..3149372 + |
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