|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3197327..3199358- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005278-T1 ID=KYF_005278-T1|Name=KYF_005278-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2032bp|location=Sequence derived from alignment at ch4:3197327..3199358- (Aspergillus niger KYF3)
ATGGGTCGCAGAAAGATCGAGATCAAGGCGATCAAGGATGATCGCAACCG
CTCAGTGTAAGTGCTAAAGCTGGTGGATCTCTTCACCTCTCCCCATTAAA
CCCTAGTTCGTCAAGCTAACGCTCTGGTGCGCGACTAGGACCTTTCTGAA
ACGGAAGGGTGGTCTGTTCAAGAAGGCACATGAGCTTGCGGTCCTGTGTT
CGGTTGATGTCGCTGTTATTATCTTTGGTCACAACAAGAAGCTCTACGAA
TTCTCGTCATGTGATATGCGAGAGGCCCTCACTCGATATCAATACGTGCG
TTGTCCACCTAACCCGCTCGTCTGGAAAGATTGTCGTTGATCTGACATTG
CCGCTTTCCTATGCTTTTAGTTTGGTCCCCCACATGAACACAAAGGCCCT
GAAGACTTTAACGGCAAACGCGACGATGATGATGACGAAGATGAGACGAC
GCCTGCCCCCGAAGATGTGCATCCTACGCCTCCAAATCCTCCCATGATTC
CCGCCCACCTGCCAGGTCATCCCGGCTTCCAGCACGTCACTCATGCGCCG
TCTGCTTCCCCGCCCATAGGGAATGGGATGGCATTTGCTCCGCGTCACGG
TACCCCTCAACCGCAGGGAGTTTCTCGGCCTTCGTCTCGGAATCATCTTC
GTCGGGTGAGCTCCAATATGGGACCTCAACAGCATCACCATGCGACCCCT
CCGCCGCCTCCGCCGCCGCCGCAAAATGGCTTCACGTACATTCCTAATCC
TTCGGTATATAACCCCAACGCTGCTCACGCCATGGCTCAACCTCCCCGCC
CACCTCAGTTCACTCATTACGGACCCCCCGGGCCGCATCACCAACCCCCT
CCGCCTCCACAGCATCATCCAGCGATGCCGCCACACTCCATGCCCCCACA
GTCTATACCTCCACATACAATGGCACCGCAAGCCATGCCGCCGCACCACC
AGGCTCCTCCACACATGCCACACCCGCCTCATGCACTTTCACAGCAACCG
CCTCCAATGGCCATGACCCAGCCGCCCCATGCCGCCATCCCGCAGGTCGC
GCAAGCGTTTCTCCCAGAGCAAGGACGAAATTCCATGCCTCCGACGTTTA
CAACAGAACAGCAACCACCGCCGCCACGAACAGTGTCGCTTCCTGAAGGA
ACCGCTCCGACAGACGCAATGCCAGGTCCCATGAAGACGGAAGGAACCCC
ATCCCCGCCGCACCAGCGATCTCTCTCTTCCAAGTCTCGCAGTATCTTCA
CACCCATTGACGACCGAGGCTCCGTATTGGCGCGCCATTTTGGCGTAGGT
CCTCCGACGGAGGCGGGAGAGAATGCGCAAACGAAGGCTGAAGGAGCAAC
ACTCGGACCAAACGAAGGGAAGCCTGCTGGGCTAACTGCAAAGCCCCCTC
CTCCACCTCCCCGAGCGGCCACGGAAGCCCCGCGTCCCCAGCCGGTAGTT
GACCTGAAGCCGCCTGTGCGTACAAACAGCGGCCAGTTCCCGCCTAAGCG
CCCGCAGTTGAAGGTACAGATACCGAGTGAGAATTCGGACCGGGGCAGCG
CAACGGCAGATTCATCGTCACGTGATTCTGCGGGGAACAAAACGCTCACG
CCTGCCAAAGCGAATCCAGACACCGGTCACTCGAGCGTGGTATTGCCCCC
GCCCTCGCCGTCTGCGGGTGCGATATTAAGTGCAGGGGCTCAAGGGCCGC
CAAATCCTTTTGCCCGGCCACCGCCTCCGGGAGCAGCACCACAGAACAAC
AGTGCATACAACAATAATAGCAATATAGATACGCCAATCTCTGCTCTTCC
TAGTCGGTTCGTCTCGGATGCGCTTCTCCCGTCACCGTCCAGTTTCTTTC
CGGAATGGGGCTTTGGGCGGTCTGGACCAGACAGCAACATGTTGCCCAGT
CCCTTGACGTTCCCTACGCCGGCGGTACAAAGTGGCCCCGGGTTTGGGCG
CGAGGATGAGCAAGACAAAAAGCGCAAAAGCCCTGATAGTGGACCCAATG
CGGAAGGGGTAGTGAAGAAACCAAAGACGTAA back to topCoding sequence (CDS) from alignment at ch4:3197327..3199358- >KYF_005278-T1 ID=KYF_005278-T1|Name=KYF_005278-T1|organism=Aspergillus niger KYF3|type=CDS|length=5625bp|location=Sequence derived from alignment at ch4:3197327..3199358- (Aspergillus niger KYF3)
TTTGGTCCCCCACATGAACACAAAGGCCCTGAAGACTTTAACGGCAAACG
CGACGATGATGATGACGAAGATGAGACGACGCCTGCCCCCGAAGATGTGC
ATCCTACGCCTCCAAATCCTCCCATGATTCCCGCCCACCTGCCAGGTCAT
CCCGGCTTCCAGCACGTCACTCATGCGCCGTCTGCTTCCCCGCCCATAGG
GAATGGGATGGCATTTGCTCCGCGTCACGGTACCCCTCAACCGCAGGGAG
TTTCTCGGCCTTCGTCTCGGAATCATCTTCGTCGGGTGAGCTCCAATATG
GGACCTCAACAGCATCACCATGCGACCCCTCCGCCGCCTCCGCCGCCGCC
GCAAAATGGCTTCACGTACATTCCTAATCCTTCGGTATATAACCCCAACG
CTGCTCACGCCATGGCTCAACCTCCCCGCCCACCTCAGTTCACTCATTAC
GGACCCCCCGGGCCGCATCACCAACCCCCTCCGCCTCCACAGCATCATCC
AGCGATGCCGCCACACTCCATGCCCCCACAGTCTATACCTCCACATACAA
TGGCACCGCAAGCCATGCCGCCGCACCACCAGGCTCCTCCACACATGCCA
CACCCGCCTCATGCACTTTCACAGCAACCGCCTCCAATGGCCATGACCCA
GCCGCCCCATGCCGCCATCCCGCAGGTCGCGCAAGCGTTTCTCCCAGAGC
AAGGACGAAATTCCATGCCTCCGACGTTTACAACAGAACAGCAACCACCG
CCGCCACGAACAGTGTCGCTTCCTGAAGGAACCGCTCCGACAGACGCAAT
GCCAGGTCCCATGAAGACGGAAGGAACCCCATCCCCGCCGCACCAGCGAT
CTCTCTCTTCCAAGTCTCGCAGTATCTTCACACCCATTGACGACCGAGGC
TCCGTATTGGCGCGCCATTTTGGCGTAGGTCCTCCGACGGAGGCGGGAGA
GAATGCGCAAACGAAGGCTGAAGGAGCAACACTCGGACCAAACGAAGGGA
AGCCTGCTGGGCTAACTGCAAAGCCCCCTCCTCCACCTCCCCGAGCGGCC
ACGGAAGCCCCGCGTCCCCAGCCGGTAGTTGACCTGAAGCCGCCTGTGCG
TACAAACAGCGGCCAGTTCCCGCCTAAGCGCCCGCAGTTGAAGGTACAGA
TACCGAGTGAGAATTCGGACCGGGGCAGCGCAACGGCAGATTCATCGTCA
CGTGATTCTGCGGGGAACAAAACGCTCACGCCTGCCAAAGCGAATCCAGA
CACCGGTCACTCGAGCGTGGTATTGCCCCCGCCCTCGCCGTCTGCGGGTG
CGATATTAAGTGCAGGGGCTCAAGGGCCGCCAAATCCTTTTGCCCGGCCA
CCGCCTCCGGGAGCAGCACCACAGAACAACAGTGCATACAACAATAATAG
CAATATAGATACGCCAATCTCTGCTCTTCCTAGTCGGTTCGTCTCGGATG
CGCTTCTCCCGTCACCGTCCAGTTTCTTTCCGGAATGGGGCTTTGGGCGG
TCTGGACCAGACAGCAACATGTTGCCCAGTCCCTTGACGTTCCCTACGCC
GGCGGTACAAAGTGGCCCCGGGTTTGGGCGCGAGGATGAGCAAGACAAAA
AGCGCAAAAGCCCTGATAGTGGACCCAATGCGGAAGGGGTAGTGAAGAAA
CCAAAGACGTAAGACCTTTCTGAAACGGAAGGGTGGTCTGTTCAAGAAGG
CACATGAGCTTGCGGTCCTGTGTTCGGTTGATGTCGCTGTTATTATCTTT
GGTCACAACAAGAAGCTCTACGAATTCTCGTCATGTGATATGCGAGAGGC
CCTCACTCGATATCAATACATGGGTCGCAGAAAGATCGAGATCAAGGCGA
TCAAGGATGATCGCAACCGCTCAGTTTTGGTCCCCCACATGAACACAAAG
GCCCTGAAGACTTTAACGGCAAACGCGACGATGATGATGACGAAGATGAG
ACGACGCCTGCCCCCGAAGATGTGCATCCTACGCCTCCAAATCCTCCCAT
GATTCCCGCCCACCTGCCAGGTCATCCCGGCTTCCAGCACGTCACTCATG
CGCCGTCTGCTTCCCCGCCCATAGGGAATGGGATGGCATTTGCTCCGCGT
CACGGTACCCCTCAACCGCAGGGAGTTTCTCGGCCTTCGTCTCGGAATCA
TCTTCGTCGGGTGAGCTCCAATATGGGACCTCAACAGCATCACCATGCGA
CCCCTCCGCCGCCTCCGCCGCCGCCGCAAAATGGCTTCACGTACATTCCT
AATCCTTCGGTATATAACCCCAACGCTGCTCACGCCATGGCTCAACCTCC
CCGCCCACCTCAGTTCACTCATTACGGACCCCCCGGGCCGCATCACCAAC
CCCCTCCGCCTCCACAGCATCATCCAGCGATGCCGCCACACTCCATGCCC
CCACAGTCTATACCTCCACATACAATGGCACCGCAAGCCATGCCGCCGCA
CCACCAGGCTCCTCCACACATGCCACACCCGCCTCATGCACTTTCACAGC
AACCGCCTCCAATGGCCATGACCCAGCCGCCCCATGCCGCCATCCCGCAG
GTCGCGCAAGCGTTTCTCCCAGAGCAAGGACGAAATTCCATGCCTCCGAC
GTTTACAACAGAACAGCAACCACCGCCGCCACGAACAGTGTCGCTTCCTG
AAGGAACCGCTCCGACAGACGCAATGCCAGGTCCCATGAAGACGGAAGGA
ACCCCATCCCCGCCGCACCAGCGATCTCTCTCTTCCAAGTCTCGCAGTAT
CTTCACACCCATTGACGACCGAGGCTCCGTATTGGCGCGCCATTTTGGCG
TAGGTCCTCCGACGGAGGCGGGAGAGAATGCGCAAACGAAGGCTGAAGGA
GCAACACTCGGACCAAACGAAGGGAAGCCTGCTGGGCTAACTGCAAAGCC
CCCTCCTCCACCTCCCCGAGCGGCCACGGAAGCCCCGCGTCCCCAGCCGG
TAGTTGACCTGAAGCCGCCTGTGCGTACAAACAGCGGCCAGTTCCCGCCT
AAGCGCCCGCAGTTGAAGGTACAGATACCGAGTGAGAATTCGGACCGGGG
CAGCGCAACGGCAGATTCATCGTCACGTGATTCTGCGGGGAACAAAACGC
TCACGCCTGCCAAAGCGAATCCAGACACCGGTCACTCGAGCGTGGTATTG
CCCCCGCCCTCGCCGTCTGCGGGTGCGATATTAAGTGCAGGGGCTCAAGG
GCCGCCAAATCCTTTTGCCCGGCCACCGCCTCCGGGAGCAGCACCACAGA
ACAACAGTGCATACAACAATAATAGCAATATAGATACGCCAATCTCTGCT
CTTCCTAGTCGGTTCGTCTCGGATGCGCTTCTCCCGTCACCGTCCAGTTT
CTTTCCGGAATGGGGCTTTGGGCGGTCTGGACCAGACAGCAACATGTTGC
CCAGTCCCTTGACGTTCCCTACGCCGGCGGTACAAAGTGGCCCCGGGTTT
GGGCGCGAGGATGAGCAAGACAAAAAGCGCAAAAGCCCTGATAGTGGACC
CAATGCGGAAGGGGTAGTGAAGAAACCAAAGACGTAAGACCTTTCTGAAA
CGGAAGGGTGGTCTGTTCAAGAAGGCACATGAGCTTGCGGTCCTGTGTTC
GGTTGATGTCGCTGTTATTATCTTTGGTCACAACAAGAAGCTCTACGAAT
TCTCGTCATGTGATATGCGAGAGGCCCTCACTCGATATCAATACATGGGT
CGCAGAAAGATCGAGATCAAGGCGATCAAGGATGATCGCAACCGCTCAGT
TTTGGTCCCCCACATGAACACAAAGGCCCTGAAGACTTTAACGGCAAACG
CGACGATGATGATGACGAAGATGAGACGACGCCTGCCCCCGAAGATGTGC
ATCCTACGCCTCCAAATCCTCCCATGATTCCCGCCCACCTGCCAGGTCAT
CCCGGCTTCCAGCACGTCACTCATGCGCCGTCTGCTTCCCCGCCCATAGG
GAATGGGATGGCATTTGCTCCGCGTCACGGTACCCCTCAACCGCAGGGAG
TTTCTCGGCCTTCGTCTCGGAATCATCTTCGTCGGGTGAGCTCCAATATG
GGACCTCAACAGCATCACCATGCGACCCCTCCGCCGCCTCCGCCGCCGCC
GCAAAATGGCTTCACGTACATTCCTAATCCTTCGGTATATAACCCCAACG
CTGCTCACGCCATGGCTCAACCTCCCCGCCCACCTCAGTTCACTCATTAC
GGACCCCCCGGGCCGCATCACCAACCCCCTCCGCCTCCACAGCATCATCC
AGCGATGCCGCCACACTCCATGCCCCCACAGTCTATACCTCCACATACAA
TGGCACCGCAAGCCATGCCGCCGCACCACCAGGCTCCTCCACACATGCCA
CACCCGCCTCATGCACTTTCACAGCAACCGCCTCCAATGGCCATGACCCA
GCCGCCCCATGCCGCCATCCCGCAGGTCGCGCAAGCGTTTCTCCCAGAGC
AAGGACGAAATTCCATGCCTCCGACGTTTACAACAGAACAGCAACCACCG
CCGCCACGAACAGTGTCGCTTCCTGAAGGAACCGCTCCGACAGACGCAAT
GCCAGGTCCCATGAAGACGGAAGGAACCCCATCCCCGCCGCACCAGCGAT
CTCTCTCTTCCAAGTCTCGCAGTATCTTCACACCCATTGACGACCGAGGC
TCCGTATTGGCGCGCCATTTTGGCGTAGGTCCTCCGACGGAGGCGGGAGA
GAATGCGCAAACGAAGGCTGAAGGAGCAACACTCGGACCAAACGAAGGGA
AGCCTGCTGGGCTAACTGCAAAGCCCCCTCCTCCACCTCCCCGAGCGGCC
ACGGAAGCCCCGCGTCCCCAGCCGGTAGTTGACCTGAAGCCGCCTGTGCG
TACAAACAGCGGCCAGTTCCCGCCTAAGCGCCCGCAGTTGAAGGTACAGA
TACCGAGTGAGAATTCGGACCGGGGCAGCGCAACGGCAGATTCATCGTCA
CGTGATTCTGCGGGGAACAAAACGCTCACGCCTGCCAAAGCGAATCCAGA
CACCGGTCACTCGAGCGTGGTATTGCCCCCGCCCTCGCCGTCTGCGGGTG
CGATATTAAGTGCAGGGGCTCAAGGGCCGCCAAATCCTTTTGCCCGGCCA
CCGCCTCCGGGAGCAGCACCACAGAACAACAGTGCATACAACAATAATAG
CAATATAGATACGCCAATCTCTGCTCTTCCTAGTCGGTTCGTCTCGGATG
CGCTTCTCCCGTCACCGTCCAGTTTCTTTCCGGAATGGGGCTTTGGGCGG
TCTGGACCAGACAGCAACATGTTGCCCAGTCCCTTGACGTTCCCTACGCC
GGCGGTACAAAGTGGCCCCGGGTTTGGGCGCGAGGATGAGCAAGACAAAA
AGCGCAAAAGCCCTGATAGTGGACCCAATGCGGAAGGGGTAGTGAAGAAA
CCAAAGACGTAAGACCTTTCTGAAACGGAAGGGTGGTCTGTTCAAGAAGG
CACATGAGCTTGCGGTCCTGTGTTCGGTTGATGTCGCTGTTATTATCTTT
GGTCACAACAAGAAGCTCTACGAATTCTCGTCATGTGATATGCGAGAGGC
CCTCACTCGATATCAATACATGGGTCGCAGAAAGATCGAGATCAAGGCGA
TCAAGGATGATCGCAACCGCTCAGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0045944 | positive regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
| GO:0003677 | DNA binding |
| GO:0046983 | protein dimerization activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033896 |
| DBxref | InterPro:IPR036879 |
| DBxref | InterPro:IPR002100 |
| DBxref | PFAM:PF00319 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3197327..3199358 - |
|
