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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3214613..3215983+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005282-T1 ID=KYF_005282-T1|Name=KYF_005282-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1371bp|location=Sequence derived from alignment at ch4:3214613..3215983+ (Aspergillus niger KYF3)
ATGGGTGGAAAGAAATCCGCAAGCTGTTTTGTCAGCTTGGGGCGCTCTAG
CCAAAAGCTCTCTCCGCCGCTGCAGAGGGGACCGGCGGGTAGCCAGGAGT
CTTCGGACTACAGTAGCCCGGACGGCAAAATTGGCCAGGTGGGGTGGGTT
GGATGGAGGAGCCCCAAAGGTCTCAATCGATGATGATCTATCTCGGATTT
CTGGAGAAGCTATTAATCCGGTGCAGACCCCAAGACGGTTTAGTGTCCCG
TAGGCGGTCTGCAACTCTTCCCCATCACGGGACTTCGGCTTGCCCTGGGG
TGGTCCGGCTCGCTAAGCGTCCCGTTTGGGGTTAGGGCGAGCCGCACCGA
ACACACCTCGCAATTTGTGAGCCTTGTGCGTTGTCCCGTTACCCTATCGA
AGCGACGACAACCACGACAACCCGGACGACTTTTGCGGGTCATACCTCCC
TTCCTTCGACTTGTTTGCGTTGCCCGCTGCTGCTCAGAGAAACGCCGTCA
GAATGCCTTCGGAACAAGGTCACAGACGTGAGTGCCATCATTTTCCGGAT
ATCAGACATGTGTGCGCGATGGTTGGAATATGGGGATGCCGGAGGATAGA
TGGGAATTTGCGGGCGCAACCTGGGCGAAGTGCTGAATGAAATGCTAACT
CGAGATTTTTGCGAAATATAGTCTATGTCAAGTAAGTTTACCACAAACCG
TCCGCCGTCGAATCCGCGCACATTCCGGATATGAATATCAAAAATATCAA
AATACATGTCGGGACATCAGAGATACGGGCCAAGCGAAGGAATGCAACGA
GAACAGACCGGTTAATACGAATTCTTTCTACAGGGGTCGCCACGTGAGCT
ACCAGCGCTCCAAGCGTACCGTCAACCCCAACACCAGGTACTTGCGATCC
GCACCGATATCGATATAGAGGAACAAGGGAATCTGACACATGGGTTATCT
AGTCTGATCAAGATCGACGGTGTTGAGAGCACCGAGGCCGCAAAGTGAGT
AGCGAACGGGTTCGGAATGGGAATATCAGAACACACAGCTAAGACGACAT
TTTTTTACAGCTTCTACCTGGGCAAGAAGGTTGCTTTCGTCTACCGGGCC
AAGCGTGAGGTCCGGGGCTCCAACATCCGGGTCATCTGGGGCAAGGTTAC
CCGTCCCCACGGTATGTGATGCTCAGCTCCAATGCGCGATGATTACGATG
GAATATTTCAATACTATCGGTGATTGTTGGAACCGAGAACGGCGGGAAAC
TAACGATATTTCCTCATGAACAGGTAACTCCGGTGTTGTCCGTGCTCAGT
TCCGCCACAACCTCCCCCCCAAGACCTTCGGTGCTACCGTCCGTGTTATG
CTGTACCCCTCCAACATCTAA back to topCoding sequence (CDS) from alignment at ch4:3214613..3215983+ >KYF_005282-T1 ID=KYF_005282-T1|Name=KYF_005282-T1|organism=Aspergillus niger KYF3|type=CDS|length=2190bp|location=Sequence derived from alignment at ch4:3214613..3215983+ (Aspergillus niger KYF3)
ATGGGTGGAAAGAAATCCGCAAGCTGTTTTGTCAGCTTGGGGCGCTCTAG
CCAAAAGCTCTCTCCGCCGCTGCAGAGGGGACCGGCGGGTAGCCAGGAGT
CTTCGGACTACAGTAGCCCGGACGGCAAAATTGGCCAGGTGGGGGGTCGC
CACGTGAGCTACCAGCGCTCCAAGCGTACCGTCAACCCCAACACCAGTCT
GATCAAGATCGACGGTGTTGAGAGCACCGAGGCCGCAAACTTCTACCTGG
GCAAGAAGGTTGCTTTCGTCTACCGGGCCAAGCGTGAGGTCCGGGGCTCC
AACATCCGGGTCATCTGGGGCAAGGTTACCCGTCCCCACGGTAACTCCGG
TGTTGTCCGTGCTCAGTTCCGCCACAACCTCCCCCCCAAGACCTTCGGTG
CTACCGTCCGTGTTATGCTGTACCCCTCCAACATCTAAATGGGTGGAAAG
AAATCCGCAAGCTGTTTTGTCAGCTTGGGGCGCTCTAGCCAAAAGCTCTC
TCCGCCGCTGCAGAGGGGACCGGCGGGTAGCCAGGAGTCTTCGGACTACA
GTAGCCCGGACGGCAAAATTGGCCAGGTGGGGGGTCGCCACGTGAGCTAC
CAGCGCTCCAAGCGTACCGTCAACCCCAACACCAGTCTGATCAAGATCGA
CGGTGTTGAGAGCACCGAGGCCGCAAACTTCTACCTGGGCAAGAAGGTTG
CTTTCGTCTACCGGGCCAAGCGTGAGGTCCGGGGCTCCAACATCCGGGTC
ATCTGGGGCAAGGTTACCCGTCCCCACGGTAACTCCGGTGTTGTCCGTGC
TCAGTTCCGCCACAACCTCCCCCCCAAGACCTTCGGTGCTACCGTCCGTG
TTATGCTGTACCCCTCCAACATCTAAATGGGTGGAAAGAAATCCGCAAGC
TGTTTTGTCAGCTTGGGGCGCTCTAGCCAAAAGCTCTCTCCGCCGCTGCA
GAGGGGACCGGCGGGTAGCCAGGAGTCTTCGGACTACAGTAGCCCGGACG
GCAAAATTGGCCAGGTGGGGGGTCGCCACGTGAGCTACCAGCGCTCCAAG
CGTACCGTCAACCCCAACACCAGTCTGATCAAGATCGACGGTGTTGAGAG
CACCGAGGCCGCAAACTTCTACCTGGGCAAGAAGGTTGCTTTCGTCTACC
GGGCCAAGCGTGAGGTCCGGGGCTCCAACATCCGGGTCATCTGGGGCAAG
GTTACCCGTCCCCACGGTAACTCCGGTGTTGTCCGTGCTCAGTTCCGCCA
CAACCTCCCCCCCAAGACCTTCGGTGCTACCGTCCGTGTTATGCTGTACC
CCTCCAACATCTAAATGGGTGGAAAGAAATCCGCAAGCTGTTTTGTCAGC
TTGGGGCGCTCTAGCCAAAAGCTCTCTCCGCCGCTGCAGAGGGGACCGGC
GGGTAGCCAGGAGTCTTCGGACTACAGTAGCCCGGACGGCAAAATTGGCC
AGGTGGGGGGTCGCCACGTGAGCTACCAGCGCTCCAAGCGTACCGTCAAC
CCCAACACCAGTCTGATCAAGATCGACGGTGTTGAGAGCACCGAGGCCGC
AAACTTCTACCTGGGCAAGAAGGTTGCTTTCGTCTACCGGGCCAAGCGTG
AGGTCCGGGGCTCCAACATCCGGGTCATCTGGGGCAAGGTTACCCGTCCC
CACGGTAACTCCGGTGTTGTCCGTGCTCAGTTCCGCCACAACCTCCCCCC
CAAGACCTTCGGTGCTACCGTCCGTGTTATGCTGTACCCCTCCAACATCT
AAATGGGTGGAAAGAAATCCGCAAGCTGTTTTGTCAGCTTGGGGCGCTCT
AGCCAAAAGCTCTCTCCGCCGCTGCAGAGGGGACCGGCGGGTAGCCAGGA
GTCTTCGGACTACAGTAGCCCGGACGGCAAAATTGGCCAGGTGGGGGGTC
GCCACGTGAGCTACCAGCGCTCCAAGCGTACCGTCAACCCCAACACCAGT
CTGATCAAGATCGACGGTGTTGAGAGCACCGAGGCCGCAAACTTCTACCT
GGGCAAGAAGGTTGCTTTCGTCTACCGGGCCAAGCGTGAGGTCCGGGGCT
CCAACATCCGGGTCATCTGGGGCAAGGTTACCCGTCCCCACGGTAACTCC
GGTGTTGTCCGTGCTCAGTTCCGCCACAACCTCCCCCCCAAGACCTTCGG
TGCTACCGTCCGTGTTATGCTGTACCCCTCCAACATCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009000 |
| DBxref | InterPro:IPR018266 |
| DBxref | InterPro:IPR038661 |
| DBxref | InterPro:IPR001780 |
| DBxref | PFAM:PF01247 |
| Product | 60S ribosomal protein L33B |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3214613..3215983 + |
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