|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3233446..3234810- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005289-T1 ID=KYF_005289-T1|Name=KYF_005289-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1365bp|location=Sequence derived from alignment at ch4:3233446..3234810- (Aspergillus niger KYF3)
ATGCTAAGATTCCTCCGCACCGCAATGGCCTCTCTAACTACTCCTCCCCG
CGTCCCCATCCCCGCCAACGGGGTCGACTACCGTGGCAAAGTAGTCCTGG
CCCCTATGGTGCGCTCCGGCGAATTGCCCTCCCGCCTCATTGCCCTCAAG
TATGGCGCCGATCTAGTTTGGGGCCCTGAAACTATCGACCGGGCTATGGC
AGGCGCCATCCGCCGTGTGAACCCCCGCAACGGCACCATCGAATTCACCC
GCATGCCCTCCAACGGCGGCCGCACCGAAAAGGCAGGCCAAGAATCCGTG
ATCTACCGTCTCGACCCCGTCCGCGAGAAAGGCAAACTCATTTATCAAAT
TGGCACTGCGACGCCTGAAATCGCCGTCCAAGCAGCCAAACTCGTCGCGG
GCGATGTCGCCGGTATCGACGTGAACTCGGGATGTCCGAAACCCTTTAGC
ACGAGCGGTGGTATGGGTGCGGCGCTTCTCAAGACACCGGATAAGTTGGT
TGCGATTCTGGAAGCCCTGGTGAAGGAGGTCGGGACGCCATTCCAGATCG
GTATCTCGGTCAAGATCCGCATTTTGAAAGATCCCGAGGAGACGAGAGCT
CTGGTGTCGCGGCTCGTGAAGACAGGCATTACGGGCTTGACAGTGCATTG
TCGGACGCCGCCCATGAGGCCGCGTGAACGCGCTATCCGTGATCAGGTGC
GCATGATTGCCGACATCTGTCATGAGGCTGGTGTCGCATGCGTTATAAAC
GGTGATGTAACCTCCAAAGATGAGGGACACGCCTTGATGAAAGAGTTCGG
CGTCGACGGCGCGATGATCGCCACAGCCGCAGAAGCAAACCCATCCTGCT
TCCGTACCGAAGCCGAGGGCGGCCTTCTCCCCTGGAAGGAGGTAGTCCAC
GAATATATCAAGTTCTGCCTCGAGTCTGAGAACCGCTTCGGCAACTCCAA
ATATCTCCTCAACATCCTCGTCCCCGGCAAGCTCCAGGAAGGCAAGCTTG
CAAAGGCAGCCAGGTCCTATGCCGATACATGCCACGCCCTCGGATTCGAG
GATCTCCTTCCCCTCGCCATGCAAGTGGACGACATCCTCAACCTCACCGA
CAAGTCAGTCACTACCAAAGACCTCCAGTCCGAACACACCCGCAGCAAGG
CCGTTCAGAACGCCATGGAGAACAACGAATCCGCGCGGGCTGCTGGCGGT
GCTTCTCGCGTCAAGTCCACCTCCCCCGCAGTCAGCGCAGGCGGCCCCAT
TCGCACGAACTCCATCCCAGCTCCTACGAAGACCAAGGCTGAGGCGGAGA
CCCAGGCCGATGTCTCTGTTCCGGCTCCCGAAGCTGCGCCTCAGAAGCAG
GAGCTGACAGCTTAA back to topCoding sequence (CDS) from alignment at ch4:3233446..3234810- >KYF_005289-T1 ID=KYF_005289-T1|Name=KYF_005289-T1|organism=Aspergillus niger KYF3|type=CDS|length=1365bp|location=Sequence derived from alignment at ch4:3233446..3234810- (Aspergillus niger KYF3)
ATGCTAAGATTCCTCCGCACCGCAATGGCCTCTCTAACTACTCCTCCCCG
CGTCCCCATCCCCGCCAACGGGGTCGACTACCGTGGCAAAGTAGTCCTGG
CCCCTATGGTGCGCTCCGGCGAATTGCCCTCCCGCCTCATTGCCCTCAAG
TATGGCGCCGATCTAGTTTGGGGCCCTGAAACTATCGACCGGGCTATGGC
AGGCGCCATCCGCCGTGTGAACCCCCGCAACGGCACCATCGAATTCACCC
GCATGCCCTCCAACGGCGGCCGCACCGAAAAGGCAGGCCAAGAATCCGTG
ATCTACCGTCTCGACCCCGTCCGCGAGAAAGGCAAACTCATTTATCAAAT
TGGCACTGCGACGCCTGAAATCGCCGTCCAAGCAGCCAAACTCGTCGCGG
GCGATGTCGCCGGTATCGACGTGAACTCGGGATGTCCGAAACCCTTTAGC
ACGAGCGGTGGTATGGGTGCGGCGCTTCTCAAGACACCGGATAAGTTGGT
TGCGATTCTGGAAGCCCTGGTGAAGGAGGTCGGGACGCCATTCCAGATCG
GTATCTCGGTCAAGATCCGCATTTTGAAAGATCCCGAGGAGACGAGAGCT
CTGGTGTCGCGGCTCGTGAAGACAGGCATTACGGGCTTGACAGTGCATTG
TCGGACGCCGCCCATGAGGCCGCGTGAACGCGCTATCCGTGATCAGGTGC
GCATGATTGCCGACATCTGTCATGAGGCTGGTGTCGCATGCGTTATAAAC
GGTGATGTAACCTCCAAAGATGAGGGACACGCCTTGATGAAAGAGTTCGG
CGTCGACGGCGCGATGATCGCCACAGCCGCAGAAGCAAACCCATCCTGCT
TCCGTACCGAAGCCGAGGGCGGCCTTCTCCCCTGGAAGGAGGTAGTCCAC
GAATATATCAAGTTCTGCCTCGAGTCTGAGAACCGCTTCGGCAACTCCAA
ATATCTCCTCAACATCCTCGTCCCCGGCAAGCTCCAGGAAGGCAAGCTTG
CAAAGGCAGCCAGGTCCTATGCCGATACATGCCACGCCCTCGGATTCGAG
GATCTCCTTCCCCTCGCCATGCAAGTGGACGACATCCTCAACCTCACCGA
CAAGTCAGTCACTACCAAAGACCTCCAGTCCGAACACACCCGCAGCAAGG
CCGTTCAGAACGCCATGGAGAACAACGAATCCGCGCGGGCTGCTGGCGGT
GCTTCTCGCGTCAAGTCCACCTCCCCCGCAGTCAGCGCAGGCGGCCCCAT
TCGCACGAACTCCATCCCAGCTCCTACGAAGACCAAGGCTGAGGCGGAGA
CCCAGGCCGATGTCTCTGTTCCGGCTCCCGAAGCTGCGCCTCAGAAGCAG
GAGCTGACAGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0017150 | tRNA dihydrouridine synthase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
| GO:0008033 | tRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092628FW |
| DBxref | InterPro:IPR035587 |
| DBxref | InterPro:IPR018517 |
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR001269 |
| DBxref | PFAM:PF01207 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3233446..3234810 - |
|
