You are here

Home

KYF_005292-T1, KYF_005292-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005292-T1
Unique NameKYF_005292-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3239079..3240363+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005292-T1 ID=KYF_005292-T1|Name=KYF_005292-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1285bp|location=Sequence derived from alignment at ch4:3239079..3240363+ (Aspergillus niger KYF3)
ATGGCCAGCATCGCCGATCTACAAGCCCGCTTGAAAGAGCTCTCAACAGC
TCTGTCCCACATCCAGCCGCTGGTCTCTCGGTTAAAGGGCTTTACGACTG
CAGTTGGACAGGGCGATCAGCCGCGATTGGAACTAGGGACGGAGATCCAT
ACTCGACTGAAAGAGGCGGAGGAGCAATTGGAGTTGCTGAAGGTCGAGGT
TGAGGCCCTGGAGGCTGCAGCGGATACGCGGCGCAAGGGTGTGGATAATG
AGAAGGAGTCGGAGAGGGAACGGGTTATTGCCTTGGCTGGACGGTTGGCG
GATGATTTGAAGAGGTAGGTGGAATCGACTGATTGCTCTTCCTGGATTGT
TTACTAATGGGTATGTTACGGCTTTGGCAGAACGAGAGGAGACTTCCGGA
ACGCACAATTACAAGCGAAGCGGAACGCTGAAGTTGCCCGACGGAAAGAG
CGAGAGCTACTGTTTACGAGGTCACAAAGTGCGGAGAGGAAGAAGCAGTC
GAGTGAGAAGCTGACGCAGGATGATATTGTCATGAATGCTTCGAATGATG
TTACGGCTGCGCTGAGACGGACGCATCAGTTGATGCAGGCGGAGCTGTCG
CGGAGTCAGTTTGCGCAGGAGACGTTAGGTTTGTGCTGGTTTATCTTGAG
TGCAGGTCAGGGTAATGGCTAACATTGGTGGTTTAGATCAATCGACTGCT
GCGCTTTCCTCGCTGTCAGAATCCTATACAGATCTCGATTCTTTGATCTC
GTCGTCGCGCAATCTCATCGGATCTTTGCTACGCTCGCAAAAGTCGGATA
CTTGGTACCTTGAGACGGCTTTCTACATATTGGTTGGCACCATTATTTGG
CTTGTCTTCCGGCGGATATTATATGGTCCCCTGTGGTGGCTCGTCTGGCT
GCCTCTCAGGCTGTTCGCGAGGTTCACGTTTGCTATTTTGGGCGCCGTCG
GGATTACCAGTAAGGCTGTTCAGTCTTCTGAACCTAGTACGATGCTCGAA
TATGTGCCGCAAGAGACCCCAATGGTTGAGCAGAAGGTGGAGCCGAACAT
CCAAAGTGCTGAGGGCGAAGCGGTCTGGGATCAAGTTCCAGTTACGGATG
AGGCAGAGGAGGACCGCTTAATTGATGAGATCGGCAAAATGGTGGAAGAA
AGCGAGGAGCAAGAGGAGACCAACATTGACGACATCTCAGAAGAGGAAAG
GCAAAGGCAGGCGGAGTTGCCCCGGAACCCTAAGAAGAGGATGTTCGAGG
CTACGGATGTACCACAGCAGAAGGATGAACTATAG
back to top

Coding sequence (CDS) from alignment at ch4:3239079..3240363+

>KYF_005292-T1 ID=KYF_005292-T1|Name=KYF_005292-T1|organism=Aspergillus niger KYF3|type=CDS|length=3483bp|location=Sequence derived from alignment at ch4:3239079..3240363+ (Aspergillus niger KYF3)
ATGGCCAGCATCGCCGATCTACAAGCCCGCTTGAAAGAGCTCTCAACAGC
TCTGTCCCACATCCAGCCGCTGGTCTCTCGGTTAAAGGGCTTTACGACTG
CAGTTGGACAGGGCGATCAGCCGCGATTGGAACTAGGGACGGAGATCCAT
ACTCGACTGAAAGAGGCGGAGGAGCAATTGGAGTTGCTGAAGGTCGAGGT
TGAGGCCCTGGAGGCTGCAGCGGATACGCGGCGCAAGGGTGTGGATAATG
AGAAGGAGTCGGAGAGGGAACGGGTTATTGCCTTGGCTGGACGGTTGGCG
GATGATTTGAAGAGAACGAGAGGAGACTTCCGGAACGCACAATTACAAGC
GAAGCGGAACGCTGAAGTTGCCCGACGGAAAGAGCGAGAGCTACTGTTTA
CGAGGTCACAAAGTGCGGAGAGGAAGAAGCAGTCGAGTGAGAAGCTGACG
CAGGATGATATTGTCATGAATGCTTCGAATGATGTTACGGCTGCGCTGAG
ACGGACGCATCAGTTGATGCAGGCGGAGCTGTCGCGGAGTCAGTTTGCGC
AGGAGACGTTAGATCAATCGACTGCTGCGCTTTCCTCGCTGTCAGAATCC
TATACAGATCTCGATTCTTTGATCTCGTCGTCGCGCAATCTCATCGGATC
TTTGCTACGCTCGCAAAAGTCGGATACTTGGTACCTTGAGACGGCTTTCT
ACATATTGGTTGGCACCATTATTTGGCTTGTCTTCCGGCGGATATTATAT
GGTCCCCTGTGGTGGCTCGTCTGGCTGCCTCTCAGGCTGTTCGCGAGGTT
CACGTTTGCTATTTTGGGCGCCGTCGGGATTACCAGTAAGGCTGTTCAGT
CTTCTGAACCTAGTACGATGCTCGAATATGTGCCGCAAGAGACCCCAATG
GTTGAGCAGAAGGTGGAGCCGAACATCCAAAGTGCTGAGGGCGAAGCGGT
CTGGGATCAAGTTCCAGTTACGGATGAGGCAGAGGAGGACCGCTTAATTG
ATGAGATCGGCAAAATGGTGGAAGAAAGCGAGGAGCAAGAGGAGACCAAC
ATTGACGACATCTCAGAAGAGGAAAGGCAAAGGCAGGCGGAGTTGCCCCG
GAACCCTAAGAAGAGGATGTTCGAGGCTACGGATGTACCACAGCAGAAGG
ATGAACTATAGATGGCCAGCATCGCCGATCTACAAGCCCGCTTGAAAGAG
CTCTCAACAGCTCTGTCCCACATCCAGCCGCTGGTCTCTCGGTTAAAGGG
CTTTACGACTGCAGTTGGACAGGGCGATCAGCCGCGATTGGAACTAGGGA
CGGAGATCCATACTCGACTGAAAGAGGCGGAGGAGCAATTGGAGTTGCTG
AAGGTCGAGGTTGAGGCCCTGGAGGCTGCAGCGGATACGCGGCGCAAGGG
TGTGGATAATGAGAAGGAGTCGGAGAGGGAACGGGTTATTGCCTTGGCTG
GACGGTTGGCGGATGATTTGAAGAGAACGAGAGGAGACTTCCGGAACGCA
CAATTACAAGCGAAGCGGAACGCTGAAGTTGCCCGACGGAAAGAGCGAGA
GCTACTGTTTACGAGGTCACAAAGTGCGGAGAGGAAGAAGCAGTCGAGTG
AGAAGCTGACGCAGGATGATATTGTCATGAATGCTTCGAATGATGTTACG
GCTGCGCTGAGACGGACGCATCAGTTGATGCAGGCGGAGCTGTCGCGGAG
TCAGTTTGCGCAGGAGACGTTAGATCAATCGACTGCTGCGCTTTCCTCGC
TGTCAGAATCCTATACAGATCTCGATTCTTTGATCTCGTCGTCGCGCAAT
CTCATCGGATCTTTGCTACGCTCGCAAAAGTCGGATACTTGGTACCTTGA
GACGGCTTTCTACATATTGGTTGGCACCATTATTTGGCTTGTCTTCCGGC
GGATATTATATGGTCCCCTGTGGTGGCTCGTCTGGCTGCCTCTCAGGCTG
TTCGCGAGGTTCACGTTTGCTATTTTGGGCGCCGTCGGGATTACCAGTAA
GGCTGTTCAGTCTTCTGAACCTAGTACGATGCTCGAATATGTGCCGCAAG
AGACCCCAATGGTTGAGCAGAAGGTGGAGCCGAACATCCAAAGTGCTGAG
GGCGAAGCGGTCTGGGATCAAGTTCCAGTTACGGATGAGGCAGAGGAGGA
CCGCTTAATTGATGAGATCGGCAAAATGGTGGAAGAAAGCGAGGAGCAAG
AGGAGACCAACATTGACGACATCTCAGAAGAGGAAAGGCAAAGGCAGGCG
GAGTTGCCCCGGAACCCTAAGAAGAGGATGTTCGAGGCTACGGATGTACC
ACAGCAGAAGGATGAACTATAGATGGCCAGCATCGCCGATCTACAAGCCC
GCTTGAAAGAGCTCTCAACAGCTCTGTCCCACATCCAGCCGCTGGTCTCT
CGGTTAAAGGGCTTTACGACTGCAGTTGGACAGGGCGATCAGCCGCGATT
GGAACTAGGGACGGAGATCCATACTCGACTGAAAGAGGCGGAGGAGCAAT
TGGAGTTGCTGAAGGTCGAGGTTGAGGCCCTGGAGGCTGCAGCGGATACG
CGGCGCAAGGGTGTGGATAATGAGAAGGAGTCGGAGAGGGAACGGGTTAT
TGCCTTGGCTGGACGGTTGGCGGATGATTTGAAGAGAACGAGAGGAGACT
TCCGGAACGCACAATTACAAGCGAAGCGGAACGCTGAAGTTGCCCGACGG
AAAGAGCGAGAGCTACTGTTTACGAGGTCACAAAGTGCGGAGAGGAAGAA
GCAGTCGAGTGAGAAGCTGACGCAGGATGATATTGTCATGAATGCTTCGA
ATGATGTTACGGCTGCGCTGAGACGGACGCATCAGTTGATGCAGGCGGAG
CTGTCGCGGAGTCAGTTTGCGCAGGAGACGTTAGATCAATCGACTGCTGC
GCTTTCCTCGCTGTCAGAATCCTATACAGATCTCGATTCTTTGATCTCGT
CGTCGCGCAATCTCATCGGATCTTTGCTACGCTCGCAAAAGTCGGATACT
TGGTACCTTGAGACGGCTTTCTACATATTGGTTGGCACCATTATTTGGCT
TGTCTTCCGGCGGATATTATATGGTCCCCTGTGGTGGCTCGTCTGGCTGC
CTCTCAGGCTGTTCGCGAGGTTCACGTTTGCTATTTTGGGCGCCGTCGGG
ATTACCAGTAAGGCTGTTCAGTCTTCTGAACCTAGTACGATGCTCGAATA
TGTGCCGCAAGAGACCCCAATGGTTGAGCAGAAGGTGGAGCCGAACATCC
AAAGTGCTGAGGGCGAAGCGGTCTGGGATCAAGTTCCAGTTACGGATGAG
GCAGAGGAGGACCGCTTAATTGATGAGATCGGCAAAATGGTGGAAGAAAG
CGAGGAGCAAGAGGAGACCAACATTGACGACATCTCAGAAGAGGAAAGGC
AAAGGCAGGCGGAGTTGCCCCGGAACCCTAAGAAGAGGATGTTCGAGGCT
ACGGATGTACCACAGCAGAAGGATGAACTATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006890retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
Vocabulary: Molecular Function
TermDefinition
GO:0005484SNAP receptor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_005292KYF_005292Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005292-T1.exon1KYF_005292-T1.exon1Aspergillus niger KYF3exon
KYF_005292-T1.exon2KYF_005292-T1.exon2Aspergillus niger KYF3exon
KYF_005292-T1.exon3KYF_005292-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005292-T1.cdsKYF_005292-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005292-T1KYF_005292-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR005606
DBxrefPFAM:PF03908
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3239079..3240363 +
Powered by Drupal