|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3455067..3456149- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005365-T1 ID=KYF_005365-T1|Name=KYF_005365-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1083bp|location=Sequence derived from alignment at ch4:3455067..3456149- (Aspergillus niger KYF3) ATGGCGTCAAAAGACCTCCCTCCTTCGACCGCTCCCTTCTTTCCCAACGT
CTTCTTTTATAACCAATTCTGTGCCAAACCCAATTGGCCACCCGCAACCA
CAAATCTCTCTGGTCAAGTGGCCATAATCACCGGAGGGAATACTGGCCTG
GGATTTGAGTGTGCATTTCAGCTTCTATCTCTTCAGCTTAGCCACTTGAT
CCTCGCCGTTCGCTCTCTCGAGAAGGGCGAAGCCGCAGCGGCCAAGCTTC
GGGCCGTTAATCCCACGTCAACAATAGATGTCTGGCCACTTGACATGAGC
TCATATGACTCCATACAAAGCTTTGCAAAGCGGGTCGAAAACCACCTTTC
CCGCCTAGATATCGCTATCCTCAATGCTGGGGTGAGACAAGCCCAGTTCA
CCACCAATCCAAGCACCGGCCACGAGGAAACCATTCAAGTCAACTATCTC
TCCACCATGCTTCTCGCTATCCTCCTCCTTCCAAGCTTGAGGGACAAATC
TCCGAAAGGAGTGCCAGGGCGATTAACTATCGTCAGCGCGGCACTATCGC
TCCTGCCAAGCTTACCAAATGTGAAGGATGCGCCACTTCTGAAGTTGTTC
GATCGTCCAGATACATATGATGCCAATGGCATTTACTGCATGTCGAAGCT
TCTCGCTCATGCGTTTCTCTACAAGTTGGTTGAATATGTCGGTGCAGATG
ATGTGATTGTGAACCTGGCAGATCCGGCCTTCGTCAAGGGCACTGACCTG
AGCCGGGATTCGCCTGGCCTTGCGAAGGCTGGGCTAGCGGTGTTTGGGGT
TTTGACGGGGAGGACAGTCAAGGTTGGTGCATCGACGTTTATTGATGCTG
CCGTGTTGAAGGGGAAGGAGTCGCATGGGTGCTTCCTTATGAGTTGGAAG
ATTGAACCGTAAGTATTCCCAACTTTCCTTTGAATTTTTCACGTCATGGC
TGACACACGTATGTTCAGGTTTAATGCGTCATTGTATACTCCAGAGGGGA
AACAATCTATTGAACAGCTGTGGCAGGAGACGATGGATGAACTTGATTTT
GCTGGTGTTCGAAGGATACTTGAGACTCTGTAA back to topCoding sequence (CDS) from alignment at ch4:3455067..3456149- >KYF_005365-T1 ID=KYF_005365-T1|Name=KYF_005365-T1|organism=Aspergillus niger KYF3|type=CDS|length=2046bp|location=Sequence derived from alignment at ch4:3455067..3456149- (Aspergillus niger KYF3) GTTTAATGCGTCATTGTATACTCCAGAGGGGAAACAATCTATTGAACAGC TGTGGCAGGAGACGATGGATGAACTTGATTTTGCTGGTGTTCGAAGGATA CTTGAGACTCTGTAAATGGCGTCAAAAGACCTCCCTCCTTCGACCGCTCC CTTCTTTCCCAACGTCTTCTTTTATAACCAATTCTGTGCCAAACCCAATT GGCCACCCGCAACCACAAATCTCTCTGGTCAAGTGGCCATAATCACCGGA GGGAATACTGGCCTGGGATTTGAGTGTGCATTTCAGCTTCTATCTCTTCA GCTTAGCCACTTGATCCTCGCCGTTCGCTCTCTCGAGAAGGGCGAAGCCG CAGCGGCCAAGCTTCGGGCCGTTAATCCCACGTCAACAATAGATGTCTGG CCACTTGACATGAGCTCATATGACTCCATACAAAGCTTTGCAAAGCGGGT CGAAAACCACCTTTCCCGCCTAGATATCGCTATCCTCAATGCTGGGGTGA GACAAGCCCAGTTCACCACCAATCCAAGCACCGGCCACGAGGAAACCATT CAAGTCAACTATCTCTCCACCATGCTTCTCGCTATCCTCCTCCTTCCAAG CTTGAGGGACAAATCTCCGAAAGGAGTGCCAGGGCGATTAACTATCGTCA GCGCGGCACTATCGCTCCTGCCAAGCTTACCAAATGTGAAGGATGCGCCA CTTCTGAAGTTGTTCGATCGTCCAGATACATATGATGCCAATGGCATTTA CTGCATGTCGAAGCTTCTCGCTCATGCGTTTCTCTACAAGTTGGTTGAAT ATGTCGGTGCAGATGATGTGATTGTGAACCTGGCAGATCCGGCCTTCGTC AAGGGCACTGACCTGAGCCGGGATTCGCCTGGCCTTGCGAAGGCTGGGCT AGCGGTGTTTGGGGTTTTGACGGGGAGGACAGTCAAGGTTGGTGCATCGA CGTTTATTGATGCTGCCGTGTTGAAGGGGAAGGAGTCGCATGGGTGCTTC CTTATGAGTTGGAAGATTGAACCGTTTAATGCGTCATTGTATACTCCAGA GGGGAAACAATCTATTGAACAGCTGTGGCAGGAGACGATGGATGAACTTG ATTTTGCTGGTGTTCGAAGGATACTTGAGACTCTGTAAATGGCGTCAAAA GACCTCCCTCCTTCGACCGCTCCCTTCTTTCCCAACGTCTTCTTTTATAA CCAATTCTGTGCCAAACCCAATTGGCCACCCGCAACCACAAATCTCTCTG GTCAAGTGGCCATAATCACCGGAGGGAATACTGGCCTGGGATTTGAGTGT GCATTTCAGCTTCTATCTCTTCAGCTTAGCCACTTGATCCTCGCCGTTCG CTCTCTCGAGAAGGGCGAAGCCGCAGCGGCCAAGCTTCGGGCCGTTAATC CCACGTCAACAATAGATGTCTGGCCACTTGACATGAGCTCATATGACTCC ATACAAAGCTTTGCAAAGCGGGTCGAAAACCACCTTTCCCGCCTAGATAT CGCTATCCTCAATGCTGGGGTGAGACAAGCCCAGTTCACCACCAATCCAA GCACCGGCCACGAGGAAACCATTCAAGTCAACTATCTCTCCACCATGCTT CTCGCTATCCTCCTCCTTCCAAGCTTGAGGGACAAATCTCCGAAAGGAGT GCCAGGGCGATTAACTATCGTCAGCGCGGCACTATCGCTCCTGCCAAGCT TACCAAATGTGAAGGATGCGCCACTTCTGAAGTTGTTCGATCGTCCAGAT ACATATGATGCCAATGGCATTTACTGCATGTCGAAGCTTCTCGCTCATGC GTTTCTCTACAAGTTGGTTGAATATGTCGGTGCAGATGATGTGATTGTGA ACCTGGCAGATCCGGCCTTCGTCAAGGGCACTGACCTGAGCCGGGATTCG CCTGGCCTTGCGAAGGCTGGGCTAGCGGTGTTTGGGGTTTTGACGGGGAG GACAGTCAAGGTTGGTGCATCGACGTTTATTGATGCTGCCGTGTTGAAGG GGAAGGAGTCGCATGGGTGCTTCCTTATGAGTTGGAAGATTGAACC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | antiSMASH:Cluster_4.6 |
Note | EggNog:ENOG41 |
Note | SMCOG1001:short-chain dehydrogenase/reductase SDR |
DBxref | InterPro:IPR036291 |
DBxref | InterPro:IPR002347 |
DBxref | PFAM:PF08659 |
DBxref | PFAM:PF13561 |
DBxref | PFAM:PF00106 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch4 | supercontig | ch4:3455067..3456149 - |
|