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KYF_005406-T1, KYF_005406-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005406-T1
Unique NameKYF_005406-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3579471..3580841-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005406-T1 ID=KYF_005406-T1|Name=KYF_005406-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1371bp|location=Sequence derived from alignment at ch4:3579471..3580841- (Aspergillus niger KYF3)
ATGGCGGACGGAATTGACAGACGCGCTGATGGTAGGACCTCCAAAAGTCC
CCAACAGTTATTCAGGTCGGTATACTGACTGCGCAAAACTAGACCGCATG
GAGTTCAATACCTCGAAGGAGGTCACTGTTGCTCCTACCTTCGAGGACAT
GCACTTGAAGGAGAGCCTTCTCCGTGGTATCTACGCTTATGGCTACGAAT
CTCCGTCTGCAGTCCAGTCCCGTGCCATTGTCCAGATCTGCAAAGGTCGC
GATACCATTGCTCAGGCGCAATCCGGTACTGGTAAGACCGCTACATTCTC
GATTAGTATCCTCCAGGTCATCGATACCGTCGTCCGCGAATCTCAGGGTA
TGTAATATGCGCTCAATTGCATTTTGTTGGTGGTAATCTCACATCTGATA
GCCCTCGTCCTTTCCCCCACTCGTGAACTTGCCACCCAGATTCAGTCCGT
TATTATGGCCCTCGGTGATTACATGAACGTTCAGTGCCATGCTTGTATTG
GAGGCACAAATATTGGAGAGGATATCAGGAAGCTTGACTACGGCCAGCAT
GTCGTTTCGGGCACACCGGGCAGAGTCGCCGATATGATTCGCAGACGTCA
TCTGCGCACCCGTCACATCAAGATGCTGGTTCTTGATGAAGCCGATGAAC
TACTCAACCGTGGATTCCGTGAACAGATTTACGATGTCTACCGCTACCTT
CCTCCTGCCACGCAAGTCGTTGTCGTTTCCGCTACTCTCCCCTATGATGT
GCTTGACATGACCACCAAGTTCATGACAGACCCCGTGCGTGTCCTGGTCA
AGCGTGACGAGTTGACCCTCGAAGGCATCAAGCAGTACTTCATCGCGGTG
GAGAAGGAAGAGTGGAAGTTCGATACCCTTTGCGACCTTTACGATACCTT
GACTATCACCCAGGCGGTCATCTTCTGCAACACCCGTCGCAAGGTCGACT
GGCTTACCGACAAGATGCGCGAAGCCAACTTTACTGTGTCCAGTATGCAC
GGTGAAATGCCCCAGAAGGAGCGTGACAGCATTATGCAGGATTTCCGCCA
GGGTAATTCCCGTGTGCTTATCTCCACTGATGTCTGGGCTCGTGGTATCG
ATGTGCAGCAGGTGTCCCTCGTCATCAACTACGATCTGCCCACTAACCGT
GAAAACTACATCCACCGTATCGGTCGTAGTGGTCGTTTCGGTCGCAAGGG
TGTTGCCATCAACTTCGTCACCAGCGATGACGTGCGCATCCTCCGCGACA
TTGAACTCTACTACTCCACTCAGATTGATGAGATGCCCATGAATGGTATG
TTGACACCATCTATATCACCAAGACCGGATATAACTAACCCATTTTTCCA
GTTGCCGATCTTCTGTCATAA
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Coding sequence (CDS) from alignment at ch4:3579471..3580841-

>KYF_005406-T1 ID=KYF_005406-T1|Name=KYF_005406-T1|organism=Aspergillus niger KYF3|type=CDS|length=4800bp|location=Sequence derived from alignment at ch4:3579471..3580841- (Aspergillus niger KYF3)
TTGCCGATCTTCTGTCATAACCCTCGTCCTTTCCCCCACTCGTGAACTTG
CCACCCAGATTCAGTCCGTTATTATGGCCCTCGGTGATTACATGAACGTT
CAGTGCCATGCTTGTATTGGAGGCACAAATATTGGAGAGGATATCAGGAA
GCTTGACTACGGCCAGCATGTCGTTTCGGGCACACCGGGCAGAGTCGCCG
ATATGATTCGCAGACGTCATCTGCGCACCCGTCACATCAAGATGCTGGTT
CTTGATGAAGCCGATGAACTACTCAACCGTGGATTCCGTGAACAGATTTA
CGATGTCTACCGCTACCTTCCTCCTGCCACGCAAGTCGTTGTCGTTTCCG
CTACTCTCCCCTATGATGTGCTTGACATGACCACCAAGTTCATGACAGAC
CCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGACCCTCGAAGGCATCAA
GCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGGAAGTTCGATACCCTTT
GCGACCTTTACGATACCTTGACTATCACCCAGGCGGTCATCTTCTGCAAC
ACCCGTCGCAAGGTCGACTGGCTTACCGACAAGATGCGCGAAGCCAACTT
TACTGTGTCCAGTATGCACGGTGAAATGCCCCAGAAGGAGCGTGACAGCA
TTATGCAGGATTTCCGCCAGGGTAATTCCCGTGTGCTTATCTCCACTGAT
GTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGTCCCTCGTCATCAACTA
CGATCTGCCCACTAACCGTGAAAACTACATCCACCGTATCGGTCGTAGTG
GTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTTCGTCACCAGCGATGAC
GTGCGCATCCTCCGCGACATTGAACTCTACTACTCCACTCAGATTGATGA
GATGCCCATGAATGACCGCATGGAGTTCAATACCTCGAAGGAGGTCACTG
TTGCTCCTACCTTCGAGGACATGCACTTGAAGGAGAGCCTTCTCCGTGGT
ATCTACGCTTATGGCTACGAATCTCCGTCTGCAGTCCAGTCCCGTGCCAT
TGTCCAGATCTGCAAAGGTCGCGATACCATTGCTCAGGCGCAATCCGGTA
CTGGTAAGACCGCTACATTCTCGATTAGTATCCTCCAGGTCATCGATACC
GTCGTCCGCGAATCTCAGGATGGCGGACGGAATTGACAGACGCGCTGATG
TTGCCGATCTTCTGTCATAACCCTCGTCCTTTCCCCCACTCGTGAACTTG
CCACCCAGATTCAGTCCGTTATTATGGCCCTCGGTGATTACATGAACGTT
CAGTGCCATGCTTGTATTGGAGGCACAAATATTGGAGAGGATATCAGGAA
GCTTGACTACGGCCAGCATGTCGTTTCGGGCACACCGGGCAGAGTCGCCG
ATATGATTCGCAGACGTCATCTGCGCACCCGTCACATCAAGATGCTGGTT
CTTGATGAAGCCGATGAACTACTCAACCGTGGATTCCGTGAACAGATTTA
CGATGTCTACCGCTACCTTCCTCCTGCCACGCAAGTCGTTGTCGTTTCCG
CTACTCTCCCCTATGATGTGCTTGACATGACCACCAAGTTCATGACAGAC
CCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGACCCTCGAAGGCATCAA
GCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGGAAGTTCGATACCCTTT
GCGACCTTTACGATACCTTGACTATCACCCAGGCGGTCATCTTCTGCAAC
ACCCGTCGCAAGGTCGACTGGCTTACCGACAAGATGCGCGAAGCCAACTT
TACTGTGTCCAGTATGCACGGTGAAATGCCCCAGAAGGAGCGTGACAGCA
TTATGCAGGATTTCCGCCAGGGTAATTCCCGTGTGCTTATCTCCACTGAT
GTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGTCCCTCGTCATCAACTA
CGATCTGCCCACTAACCGTGAAAACTACATCCACCGTATCGGTCGTAGTG
GTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTTCGTCACCAGCGATGAC
GTGCGCATCCTCCGCGACATTGAACTCTACTACTCCACTCAGATTGATGA
GATGCCCATGAATGACCGCATGGAGTTCAATACCTCGAAGGAGGTCACTG
TTGCTCCTACCTTCGAGGACATGCACTTGAAGGAGAGCCTTCTCCGTGGT
ATCTACGCTTATGGCTACGAATCTCCGTCTGCAGTCCAGTCCCGTGCCAT
TGTCCAGATCTGCAAAGGTCGCGATACCATTGCTCAGGCGCAATCCGGTA
CTGGTAAGACCGCTACATTCTCGATTAGTATCCTCCAGGTCATCGATACC
GTCGTCCGCGAATCTCAGGATGGCGGACGGAATTGACAGACGCGCTGATG
TTGCCGATCTTCTGTCATAACCCTCGTCCTTTCCCCCACTCGTGAACTTG
CCACCCAGATTCAGTCCGTTATTATGGCCCTCGGTGATTACATGAACGTT
CAGTGCCATGCTTGTATTGGAGGCACAAATATTGGAGAGGATATCAGGAA
GCTTGACTACGGCCAGCATGTCGTTTCGGGCACACCGGGCAGAGTCGCCG
ATATGATTCGCAGACGTCATCTGCGCACCCGTCACATCAAGATGCTGGTT
CTTGATGAAGCCGATGAACTACTCAACCGTGGATTCCGTGAACAGATTTA
CGATGTCTACCGCTACCTTCCTCCTGCCACGCAAGTCGTTGTCGTTTCCG
CTACTCTCCCCTATGATGTGCTTGACATGACCACCAAGTTCATGACAGAC
CCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGACCCTCGAAGGCATCAA
GCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGGAAGTTCGATACCCTTT
GCGACCTTTACGATACCTTGACTATCACCCAGGCGGTCATCTTCTGCAAC
ACCCGTCGCAAGGTCGACTGGCTTACCGACAAGATGCGCGAAGCCAACTT
TACTGTGTCCAGTATGCACGGTGAAATGCCCCAGAAGGAGCGTGACAGCA
TTATGCAGGATTTCCGCCAGGGTAATTCCCGTGTGCTTATCTCCACTGAT
GTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGTCCCTCGTCATCAACTA
CGATCTGCCCACTAACCGTGAAAACTACATCCACCGTATCGGTCGTAGTG
GTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTTCGTCACCAGCGATGAC
GTGCGCATCCTCCGCGACATTGAACTCTACTACTCCACTCAGATTGATGA
GATGCCCATGAATGACCGCATGGAGTTCAATACCTCGAAGGAGGTCACTG
TTGCTCCTACCTTCGAGGACATGCACTTGAAGGAGAGCCTTCTCCGTGGT
ATCTACGCTTATGGCTACGAATCTCCGTCTGCAGTCCAGTCCCGTGCCAT
TGTCCAGATCTGCAAAGGTCGCGATACCATTGCTCAGGCGCAATCCGGTA
CTGGTAAGACCGCTACATTCTCGATTAGTATCCTCCAGGTCATCGATACC
GTCGTCCGCGAATCTCAGGATGGCGGACGGAATTGACAGACGCGCTGATG
TTGCCGATCTTCTGTCATAACCCTCGTCCTTTCCCCCACTCGTGAACTTG
CCACCCAGATTCAGTCCGTTATTATGGCCCTCGGTGATTACATGAACGTT
CAGTGCCATGCTTGTATTGGAGGCACAAATATTGGAGAGGATATCAGGAA
GCTTGACTACGGCCAGCATGTCGTTTCGGGCACACCGGGCAGAGTCGCCG
ATATGATTCGCAGACGTCATCTGCGCACCCGTCACATCAAGATGCTGGTT
CTTGATGAAGCCGATGAACTACTCAACCGTGGATTCCGTGAACAGATTTA
CGATGTCTACCGCTACCTTCCTCCTGCCACGCAAGTCGTTGTCGTTTCCG
CTACTCTCCCCTATGATGTGCTTGACATGACCACCAAGTTCATGACAGAC
CCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGACCCTCGAAGGCATCAA
GCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGGAAGTTCGATACCCTTT
GCGACCTTTACGATACCTTGACTATCACCCAGGCGGTCATCTTCTGCAAC
ACCCGTCGCAAGGTCGACTGGCTTACCGACAAGATGCGCGAAGCCAACTT
TACTGTGTCCAGTATGCACGGTGAAATGCCCCAGAAGGAGCGTGACAGCA
TTATGCAGGATTTCCGCCAGGGTAATTCCCGTGTGCTTATCTCCACTGAT
GTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGTCCCTCGTCATCAACTA
CGATCTGCCCACTAACCGTGAAAACTACATCCACCGTATCGGTCGTAGTG
GTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTTCGTCACCAGCGATGAC
GTGCGCATCCTCCGCGACATTGAACTCTACTACTCCACTCAGATTGATGA
GATGCCCATGAATGACCGCATGGAGTTCAATACCTCGAAGGAGGTCACTG
TTGCTCCTACCTTCGAGGACATGCACTTGAAGGAGAGCCTTCTCCGTGGT
ATCTACGCTTATGGCTACGAATCTCCGTCTGCAGTCCAGTCCCGTGCCAT
TGTCCAGATCTGCAAAGGTCGCGATACCATTGCTCAGGCGCAATCCGGTA
CTGGTAAGACCGCTACATTCTCGATTAGTATCCTCCAGGTCATCGATACC
GTCGTCCGCGAATCTCAGGATGGCGGACGGAATTGACAGACGCGCTGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
FAL1KYF_005406Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005406-T1KYF_005406-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005406-T1.cdsKYF_005406-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005406-T1.exon4KYF_005406-T1.exon4Aspergillus niger KYF3exon
KYF_005406-T1.exon3KYF_005406-T1.exon3Aspergillus niger KYF3exon
KYF_005406-T1.exon2KYF_005406-T1.exon2Aspergillus niger KYF3exon
KYF_005406-T1.exon1KYF_005406-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR001650
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
ProductRNA helicase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3579471..3580841 -
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