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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3747126..3748948- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005452-T1 ID=KYF_005452-T1|Name=KYF_005452-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1823bp|location=Sequence derived from alignment at ch4:3747126..3748948- (Aspergillus niger KYF3) ATGGAGGTTCATACGTTGGTTTGTGCGCCGGGGAAGCCTCTTCCCCCCGC
ACAACCCCAGCTTTCCGCAGCCGCTGCGCCTGAGAAGAGAAAGCGGGTCC
GTCGATGGCATCACCGAGGATTTACAGGCTGTTCGACATGTCGTCGACGC
CACGTCCGCTGCGACGAAGCATCGCCATCCTGCAAAAACTGTACACGCCT
GGGTCTTGAGTGTGATGGCACTCAAGGTCGCATGACCTTCAAAGTCTACG
GACCGCCGCAAGCGGATTCGTCTCCCGCCACTGCCAAGAAATGCGACAAA
AAGATCAAGATCGAAGGGGACAATAAAGTGAAGCAGGAACCGGCAGGAGA
CGAGAATGAGTCCTTCGAAACCTTAATTGTGTCTCCAACGACAGTGTCCG
ACATGAAGCCTATCAAATATCGCTTCCAAGAACCCATTTCTCCTGCCGAG
TTTTTGTCGTCGTCTCTGGACTGCGTCGAAGGCCGGTATTACACTCATTT
CGTTGACCAGGTCTCTACTTTACTCCTCATCTATGATAATTCGAACAATA
TCAACCCCTACCGAAGATTCTTCCCTGAGCTCGCTCGATCCTCAACGTCA
ATGGCCAGCGCTATGCAAGCCATGGGTGCGTTGCACCTTGCCAATACATC
CAGAGGACAACAGCGAAACAAGCACTTCCAACAAGCCATGAGCAATTATG
GCGAGGTTGTCAAGTCATTCAGAACCCGATATACAGACCCCAATCACACC
GTGCGGCTAACTGATTTCGCCACCTGCCTTCTACTGTCACTGTTTGAGGT
GAGTCCCTTGTTGTTCACTCGGGCCTAGAGAGCACATTGCTAATTTATCA
GATGATGGATTCTCAACATCACAATTGGGCTATCCATCTGAAGGGTGCCC
GAGAAATCTATCGAATACTTTTCACCCCCAATGACGACCCCGACAAAGAA
GCCAAGCGCCTCGCTGAAATCAATCACCCACTTCGACCCTTCCTCGTATC
ACTGCTCTCATACTTAGACGTTGCGGGTGCCTGTGCCACCAGCGAGGGAA
CCGTGGTGGAAGGCAGCTACTGGACAACACACGGAGGTGGCTGGGAATAC
AATCTAGGTACACCAAGCCTATCGGCCGAACAACCCGCTTACAGTCACCA
CCTCGTGGAATTGCGCCAATGTTGGTCTGCTATGATGGAGATTCAAGCAG
CCATCAGTGCCTTTGGAAAAGCGAAACAAGATGGTCTGATGCCCTTCGAA
CAACAAGACCTGGCTTATCACGAGCTATTGCAGCGGCTGGTGCAATGGCG
TCTGAACGCACCGCAGGCACTGCAGACTTTAGGCGAACTAGACGATGAGA
GCTTGCAACAATATCCCTACCCCGATGTCCTTGAGTATGCCGGATGTATC
GAAGCATATGAGAAGGCCACCAATATATTCCTACATCGGGTTGGAGCGGC
GGGGCGTCCTGATATACAGCCTCAAAGGGTGCTGTTAGACATGCTTGCTA
CTCGAATTTTGGCGTTGATCGGAAAGCTCGCCAAGGACGTGGGCCAATTG
GCGGTACTATGGCCACTCTTCACAGCTGGCCGAGAATCACGGAACTTGAG
TGAGCAGAAATTTGTGCGGCAGACCATGACTGATCTCCAGCGGTTCGGGT
TCAAGGTATGTCAAACACGGATATCATCAATGATCGAACGAATGCTAACA
GGTTTGCAGAACGTTGACAAGGCCCTCGAGGAACTGGAACAAGCGTGGTT
TAAGCAGCGAGCTTTCCCAGAAGGCTGGATTGATACCATGGACGATATAC
GCTCTTCTATCCTACTCCCTTGA back to topCoding sequence (CDS) from alignment at ch4:3747126..3748948- >KYF_005452-T1 ID=KYF_005452-T1|Name=KYF_005452-T1|organism=Aspergillus niger KYF3|type=CDS|length=5148bp|location=Sequence derived from alignment at ch4:3747126..3748948- (Aspergillus niger KYF3) AACGTTGACAAGGCCCTCGAGGAACTGGAACAAGCGTGGTTTAAGCAGCG AGCTTTCCCAGAAGGCTGGATTGATACCATGGACGATATACGCTCTTCTA TCCTACTCCCTTGAATGATGGATTCTCAACATCACAATTGGGCTATCCAT CTGAAGGGTGCCCGAGAAATCTATCGAATACTTTTCACCCCCAATGACGA CCCCGACAAAGAAGCCAAGCGCCTCGCTGAAATCAATCACCCACTTCGAC CCTTCCTCGTATCACTGCTCTCATACTTAGACGTTGCGGGTGCCTGTGCC ACCAGCGAGGGAACCGTGGTGGAAGGCAGCTACTGGACAACACACGGAGG TGGCTGGGAATACAATCTAGGTACACCAAGCCTATCGGCCGAACAACCCG CTTACAGTCACCACCTCGTGGAATTGCGCCAATGTTGGTCTGCTATGATG GAGATTCAAGCAGCCATCAGTGCCTTTGGAAAAGCGAAACAAGATGGTCT GATGCCCTTCGAACAACAAGACCTGGCTTATCACGAGCTATTGCAGCGGC TGGTGCAATGGCGTCTGAACGCACCGCAGGCACTGCAGACTTTAGGCGAA CTAGACGATGAGAGCTTGCAACAATATCCCTACCCCGATGTCCTTGAGTA TGCCGGATGTATCGAAGCATATGAGAAGGCCACCAATATATTCCTACATC GGGTTGGAGCGGCGGGGCGTCCTGATATACAGCCTCAAAGGGTGCTGTTA GACATGCTTGCTACTCGAATTTTGGCGTTGATCGGAAAGCTCGCCAAGGA CGTGGGCCAATTGGCGGTACTATGGCCACTCTTCACAGCTGGCCGAGAAT CACGGAACTTGAGTGAGCAGAAATTTGTGCGGCAGACCATGACTGATCTC CAGCGGTTCGGGTTCAAGATGGAGGTTCATACGTTGGTTTGTGCGCCGGG GAAGCCTCTTCCCCCCGCACAACCCCAGCTTTCCGCAGCCGCTGCGCCTG AGAAGAGAAAGCGGGTCCGTCGATGGCATCACCGAGGATTTACAGGCTGT TCGACATGTCGTCGACGCCACGTCCGCTGCGACGAAGCATCGCCATCCTG CAAAAACTGTACACGCCTGGGTCTTGAGTGTGATGGCACTCAAGGTCGCA TGACCTTCAAAGTCTACGGACCGCCGCAAGCGGATTCGTCTCCCGCCACT GCCAAGAAATGCGACAAAAAGATCAAGATCGAAGGGGACAATAAAGTGAA GCAGGAACCGGCAGGAGACGAGAATGAGTCCTTCGAAACCTTAATTGTGT CTCCAACGACAGTGTCCGACATGAAGCCTATCAAATATCGCTTCCAAGAA CCCATTTCTCCTGCCGAGTTTTTGTCGTCGTCTCTGGACTGCGTCGAAGG CCGGTATTACACTCATTTCGTTGACCAGGTCTCTACTTTACTCCTCATCT ATGATAATTCGAACAATATCAACCCCTACCGAAGATTCTTCCCTGAGCTC GCTCGATCCTCAACGTCAATGGCCAGCGCTATGCAAGCCATGGGTGCGTT GCACCTTGCCAATACATCCAGAGGACAACAGCGAAACAAGCACTTCCAAC AAGCCATGAGCAATTATGGCGAGGTTGTCAAGTCATTCAGAACCCGATAT ACAGACCCCAATCACACCGTGCGGCTAACTGATTTCGCCACCTGCCTTCT ACTGTCACTGTTTGAGAACGTTGACAAGGCCCTCGAGGAACTGGAACAAG CGTGGTTTAAGCAGCGAGCTTTCCCAGAAGGCTGGATTGATACCATGGAC GATATACGCTCTTCTATCCTACTCCCTTGAATGATGGATTCTCAACATCA CAATTGGGCTATCCATCTGAAGGGTGCCCGAGAAATCTATCGAATACTTT TCACCCCCAATGACGACCCCGACAAAGAAGCCAAGCGCCTCGCTGAAATC AATCACCCACTTCGACCCTTCCTCGTATCACTGCTCTCATACTTAGACGT TGCGGGTGCCTGTGCCACCAGCGAGGGAACCGTGGTGGAAGGCAGCTACT GGACAACACACGGAGGTGGCTGGGAATACAATCTAGGTACACCAAGCCTA TCGGCCGAACAACCCGCTTACAGTCACCACCTCGTGGAATTGCGCCAATG TTGGTCTGCTATGATGGAGATTCAAGCAGCCATCAGTGCCTTTGGAAAAG CGAAACAAGATGGTCTGATGCCCTTCGAACAACAAGACCTGGCTTATCAC GAGCTATTGCAGCGGCTGGTGCAATGGCGTCTGAACGCACCGCAGGCACT GCAGACTTTAGGCGAACTAGACGATGAGAGCTTGCAACAATATCCCTACC CCGATGTCCTTGAGTATGCCGGATGTATCGAAGCATATGAGAAGGCCACC AATATATTCCTACATCGGGTTGGAGCGGCGGGGCGTCCTGATATACAGCC TCAAAGGGTGCTGTTAGACATGCTTGCTACTCGAATTTTGGCGTTGATCG GAAAGCTCGCCAAGGACGTGGGCCAATTGGCGGTACTATGGCCACTCTTC ACAGCTGGCCGAGAATCACGGAACTTGAGTGAGCAGAAATTTGTGCGGCA GACCATGACTGATCTCCAGCGGTTCGGGTTCAAGATGGAGGTTCATACGT TGGTTTGTGCGCCGGGGAAGCCTCTTCCCCCCGCACAACCCCAGCTTTCC GCAGCCGCTGCGCCTGAGAAGAGAAAGCGGGTCCGTCGATGGCATCACCG AGGATTTACAGGCTGTTCGACATGTCGTCGACGCCACGTCCGCTGCGACG AAGCATCGCCATCCTGCAAAAACTGTACACGCCTGGGTCTTGAGTGTGAT GGCACTCAAGGTCGCATGACCTTCAAAGTCTACGGACCGCCGCAAGCGGA TTCGTCTCCCGCCACTGCCAAGAAATGCGACAAAAAGATCAAGATCGAAG GGGACAATAAAGTGAAGCAGGAACCGGCAGGAGACGAGAATGAGTCCTTC GAAACCTTAATTGTGTCTCCAACGACAGTGTCCGACATGAAGCCTATCAA ATATCGCTTCCAAGAACCCATTTCTCCTGCCGAGTTTTTGTCGTCGTCTC TGGACTGCGTCGAAGGCCGGTATTACACTCATTTCGTTGACCAGGTCTCT ACTTTACTCCTCATCTATGATAATTCGAACAATATCAACCCCTACCGAAG ATTCTTCCCTGAGCTCGCTCGATCCTCAACGTCAATGGCCAGCGCTATGC AAGCCATGGGTGCGTTGCACCTTGCCAATACATCCAGAGGACAACAGCGA AACAAGCACTTCCAACAAGCCATGAGCAATTATGGCGAGGTTGTCAAGTC ATTCAGAACCCGATATACAGACCCCAATCACACCGTGCGGCTAACTGATT TCGCCACCTGCCTTCTACTGTCACTGTTTGAGAACGTTGACAAGGCCCTC GAGGAACTGGAACAAGCGTGGTTTAAGCAGCGAGCTTTCCCAGAAGGCTG GATTGATACCATGGACGATATACGCTCTTCTATCCTACTCCCTTGAATGA TGGATTCTCAACATCACAATTGGGCTATCCATCTGAAGGGTGCCCGAGAA ATCTATCGAATACTTTTCACCCCCAATGACGACCCCGACAAAGAAGCCAA GCGCCTCGCTGAAATCAATCACCCACTTCGACCCTTCCTCGTATCACTGC TCTCATACTTAGACGTTGCGGGTGCCTGTGCCACCAGCGAGGGAACCGTG GTGGAAGGCAGCTACTGGACAACACACGGAGGTGGCTGGGAATACAATCT AGGTACACCAAGCCTATCGGCCGAACAACCCGCTTACAGTCACCACCTCG TGGAATTGCGCCAATGTTGGTCTGCTATGATGGAGATTCAAGCAGCCATC AGTGCCTTTGGAAAAGCGAAACAAGATGGTCTGATGCCCTTCGAACAACA AGACCTGGCTTATCACGAGCTATTGCAGCGGCTGGTGCAATGGCGTCTGA ACGCACCGCAGGCACTGCAGACTTTAGGCGAACTAGACGATGAGAGCTTG CAACAATATCCCTACCCCGATGTCCTTGAGTATGCCGGATGTATCGAAGC ATATGAGAAGGCCACCAATATATTCCTACATCGGGTTGGAGCGGCGGGGC GTCCTGATATACAGCCTCAAAGGGTGCTGTTAGACATGCTTGCTACTCGA ATTTTGGCGTTGATCGGAAAGCTCGCCAAGGACGTGGGCCAATTGGCGGT ACTATGGCCACTCTTCACAGCTGGCCGAGAATCACGGAACTTGAGTGAGC AGAAATTTGTGCGGCAGACCATGACTGATCTCCAGCGGTTCGGGTTCAAG ATGGAGGTTCATACGTTGGTTTGTGCGCCGGGGAAGCCTCTTCCCCCCGC ACAACCCCAGCTTTCCGCAGCCGCTGCGCCTGAGAAGAGAAAGCGGGTCC GTCGATGGCATCACCGAGGATTTACAGGCTGTTCGACATGTCGTCGACGC CACGTCCGCTGCGACGAAGCATCGCCATCCTGCAAAAACTGTACACGCCT GGGTCTTGAGTGTGATGGCACTCAAGGTCGCATGACCTTCAAAGTCTACG GACCGCCGCAAGCGGATTCGTCTCCCGCCACTGCCAAGAAATGCGACAAA AAGATCAAGATCGAAGGGGACAATAAAGTGAAGCAGGAACCGGCAGGAGA CGAGAATGAGTCCTTCGAAACCTTAATTGTGTCTCCAACGACAGTGTCCG ACATGAAGCCTATCAAATATCGCTTCCAAGAACCCATTTCTCCTGCCGAG TTTTTGTCGTCGTCTCTGGACTGCGTCGAAGGCCGGTATTACACTCATTT CGTTGACCAGGTCTCTACTTTACTCCTCATCTATGATAATTCGAACAATA TCAACCCCTACCGAAGATTCTTCCCTGAGCTCGCTCGATCCTCAACGTCA ATGGCCAGCGCTATGCAAGCCATGGGTGCGTTGCACCTTGCCAATACATC CAGAGGACAACAGCGAAACAAGCACTTCCAACAAGCCATGAGCAATTATG GCGAGGTTGTCAAGTCATTCAGAACCCGATATACAGACCCCAATCACACC GTGCGGCTAACTGATTTCGCCACCTGCCTTCTACTGTCACTGTTTGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
Term | Definition |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | EggNog:ENOG41 |
DBxref | InterPro:IPR021858 |
DBxref | InterPro:IPR036864 |
DBxref | InterPro:IPR001138 |
DBxref | PFAM:PF00172 |
DBxref | PFAM:PF11951 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch4 | supercontig | ch4:3747126..3748948 - |
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