You are here

Home

KYF_005464-T1, KYF_005464-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005464-T1
Unique NameKYF_005464-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3795391..3796203-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005464-T1 ID=KYF_005464-T1|Name=KYF_005464-T1|organism=Aspergillus niger KYF3|type=mRNA|length=813bp|location=Sequence derived from alignment at ch4:3795391..3796203- (Aspergillus niger KYF3)
ATGCTAATCTTCGAAACCCTCCAAACAGGTTTCGACGGTGTCATTCACAT
GTCAGAAGAAGTCAACGACGCACCTAGGGCCGTTCCCCGATCAATGGTCT
GGGGCTTATGCGTGAACGCCGTCCTTGCATTCGGCTTCGCCATAGCCCTA
CTATACACTATGGGCGACTTCCAGAAAGCCCTCGACTCACCTACAGGATA
CCCCATCATTGAAATATTCTATGCCCAGACCGGATCAAAAGCAGCATCCA
GCGCAATGATGCTACCGATCCTCCTCTCTGGCTGCTATTCCTCCTTCAAC
GTCCTAGCGTCAGTCAGTCGACTCACATGGGCGTTTGCGCGCGACGAGGG
TTTCCCCTTCTCATCGTTTTTCGCGCATGTATCACCTCGGTACAAGATCC
CCCTGCGATCTCTTTTCCTAGTGACAACAATTACCGTTTTGATTGCCCTG
ATCAACATTGGTTCCTCGGCTGCGTTCAATGCCGTCTTGTCTCTGGACAC
TCTCGCCCTTTACATTTCCTATCTGGTCCCTGTCCTTTTCATGCTGATCA
AGCGGGTTCGCTTCTCGAGTGAGATCCGTTATGGTCCGTTTAACTTGGGA
AGGTACGGCATTCCGATTAATGCTTTCGCCATGGCGTACGGTACTTATAT
GACGATCTTCCTTCCCTGGCCTGAGACTCAGCCCGTCACGGCGAGCGGCA
TGAATTATGGTGCTCCGGTGTTTGGTGTCGCTCTGTTATTTGCGGTGATT
GACTGGTTTGTTCGAGGACATAAGAAGTGGAATGGGCCCACAGTTATGGC
GTCGCCAAAGTAG
back to top

Coding sequence (CDS) from alignment at ch4:3795391..3796203-

>KYF_005464-T1 ID=KYF_005464-T1|Name=KYF_005464-T1|organism=Aspergillus niger KYF3|type=CDS|length=813bp|location=Sequence derived from alignment at ch4:3795391..3796203- (Aspergillus niger KYF3)
ATGCTAATCTTCGAAACCCTCCAAACAGGTTTCGACGGTGTCATTCACAT
GTCAGAAGAAGTCAACGACGCACCTAGGGCCGTTCCCCGATCAATGGTCT
GGGGCTTATGCGTGAACGCCGTCCTTGCATTCGGCTTCGCCATAGCCCTA
CTATACACTATGGGCGACTTCCAGAAAGCCCTCGACTCACCTACAGGATA
CCCCATCATTGAAATATTCTATGCCCAGACCGGATCAAAAGCAGCATCCA
GCGCAATGATGCTACCGATCCTCCTCTCTGGCTGCTATTCCTCCTTCAAC
GTCCTAGCGTCAGTCAGTCGACTCACATGGGCGTTTGCGCGCGACGAGGG
TTTCCCCTTCTCATCGTTTTTCGCGCATGTATCACCTCGGTACAAGATCC
CCCTGCGATCTCTTTTCCTAGTGACAACAATTACCGTTTTGATTGCCCTG
ATCAACATTGGTTCCTCGGCTGCGTTCAATGCCGTCTTGTCTCTGGACAC
TCTCGCCCTTTACATTTCCTATCTGGTCCCTGTCCTTTTCATGCTGATCA
AGCGGGTTCGCTTCTCGAGTGAGATCCGTTATGGTCCGTTTAACTTGGGA
AGGTACGGCATTCCGATTAATGCTTTCGCCATGGCGTACGGTACTTATAT
GACGATCTTCCTTCCCTGGCCTGAGACTCAGCCCGTCACGGCGAGCGGCA
TGAATTATGGTGCTCCGGTGTTTGGTGTCGCTCTGTTATTTGCGGTGATT
GACTGGTTTGTTCGAGGACATAAGAAGTGGAATGGGCCCACAGTTATGGC
GTCGCCAAAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_005464KYF_005464Aspergillus niger KYF3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005464-T1.cdsKYF_005464-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005464-T1.exon1KYF_005464-T1.exon1Aspergillus niger KYF3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005464-T1KYF_005464-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR002293
DBxrefPFAM:PF13520
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3795391..3796203 -
Powered by Drupal