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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4140405..4142072- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005572-T1 ID=KYF_005572-T1|Name=KYF_005572-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1668bp|location=Sequence derived from alignment at ch4:4140405..4142072- (Aspergillus niger KYF3) ATGGCTGCTCGTGGTTGGCGATTCTGGCTGATTATTGCTGGACTGTCAAT
AACATCCCTCCTCACTGCGATCGAATGTACGGTTCCATCGACTGCTCTGC
CCACGATCTCGCGCGATTTGAACGCAGGAGAGTCGTATGTTTGGTTTGTC
AACGCACTCTTTCTATCAAGGTATTGACTCTCTCTCCTCCGCACGTCTTC
TTTCTTCCTGTAACGCTAAATCGTCCGCCATGGCCCTTTCAGTACCGCCG
TCCAGCCGCTCTTTGGACAATTGGCCGACGTCTTCGGTCGACGATGGCCC
CTGATCTCCGCAGTGGCTTTCTTTGCTCTAGGCAGTGGCATCAGCGGTGG
TGCCAGTTCGACCGCGATGCTTATTGCCGGGCGCACAATCCAGGGAGTGG
GCCTCGGAGGTGTCAACATGCTCATCGACGTGGTCGTCTGTGATCTCGTC
CCCTTACGCGAGCGAGGCCAAGTGACCGCCCTCATCTTCGTCGTGTTCGC
CGTGGGATCGTCCATCGGGCCCTTCATCGGGGGTGCCTTTACACAGCACG
TCACCTGGCGGTGGGCATTCTATATCAGTCTTCCAATCGCCGGCAGCGCG
ATGGTGTTCATGATCCTCTTCCTCCAGGTCAAATCTCAGAAGCACACCAC
CTTCGCGGACAAGATGAAACGCATTGACTGGCTAGGTAATACTATACTGG
TCGCCGCGGTGGTAGCAGTTCTCATCGCGCTCAGTTTCGGTGGCACCTCA
TACCCCTGGTCAAGCTGGCGTGTCATTGTGCCGTTAGTGCTGGGACTCAT
TGGACTGATCGCCTTCGCCCTGGTGCAGGTGACGCCCAAGCTCTGTCCAG
AGCCAACCATGCCCCCTCGTCTCTTCGCGAACCGCACCACCTTTGCCGCG
TTCGTTATCAGCTTTCTGCATGGGATGCTGATGTACTGGGAGCTATACTT
CCTGCCGGTATACTTCCAAGGAGTTCAGCTAAGCACGTCGACTCGATCCG
GAGTGGAATTGTTGCCCACTGTAATCGTCACTGTCCCTGCCGCCATCGTT
GCCGGTGCTCTTGTTACTAAGACCGGCCGGTACAAGCCCATACAAATCAG
TGGCTTCGCCTTCATGGCCCTCGGCATGGGCCTCTTCAGCCTTCTCGACC
AGAACTCCAGCACAGGAGCCTGGGTCGGCTACCAGCTGCTAGCGGCCATT
GGCTCAGGCTTCATCGTCACCTCAACCCTGCCAGCTGCCCAGGCCGCGCT
GTCCGAGGCTGACGTGGCCACCTCGACAGCAACCTGGGCATTTTGCCGCG
CATTTGGCGCCGTCTGGGGCGTCTCCATCCCGGCCGCTATCTTCAATAAT
CGATTCGCCGCGCAGGTGAGCGCGCAGAACGATACGGGACACGCGGCGCA
GGTGCTACAAAACACGGGTAACGCGTACCAGCAAGCCTCGCGGGAATTTG
TCATGCAATTTTCGCCCGAGGTTCAATCGATGATTATCGACGCGTATACC
GCAGCGCTCCAGCGAGTGTGGCAGATTTCTGTGGTGTTTGCTGGACTAGG
CTTCTTATTTGCGTGGCTGGAGAAGGAGGTGGAGTTGCGAACCACGCTGG
AGACAGAATACGGGCCGGAAAAGAAAGAGCCGTCGCCCGAGGTGGAGGAC
GTTACAGTGTCCAAGTGA back to topCoding sequence (CDS) from alignment at ch4:4140405..4142072- >KYF_005572-T1 ID=KYF_005572-T1|Name=KYF_005572-T1|organism=Aspergillus niger KYF3|type=CDS|length=3120bp|location=Sequence derived from alignment at ch4:4140405..4142072- (Aspergillus niger KYF3) TACCGCCGTCCAGCCGCTCTTTGGACAATTGGCCGACGTCTTCGGTCGAC GATGGCCCCTGATCTCCGCAGTGGCTTTCTTTGCTCTAGGCAGTGGCATC AGCGGTGGTGCCAGTTCGACCGCGATGCTTATTGCCGGGCGCACAATCCA GGGAGTGGGCCTCGGAGGTGTCAACATGCTCATCGACGTGGTCGTCTGTG ATCTCGTCCCCTTACGCGAGCGAGGCCAAGTGACCGCCCTCATCTTCGTC GTGTTCGCCGTGGGATCGTCCATCGGGCCCTTCATCGGGGGTGCCTTTAC ACAGCACGTCACCTGGCGGTGGGCATTCTATATCAGTCTTCCAATCGCCG GCAGCGCGATGGTGTTCATGATCCTCTTCCTCCAGGTCAAATCTCAGAAG CACACCACCTTCGCGGACAAGATGAAACGCATTGACTGGCTAGGTAATAC TATACTGGTCGCCGCGGTGGTAGCAGTTCTCATCGCGCTCAGTTTCGGTG GCACCTCATACCCCTGGTCAAGCTGGCGTGTCATTGTGCCGTTAGTGCTG GGACTCATTGGACTGATCGCCTTCGCCCTGGTGCAGGTGACGCCCAAGCT CTGTCCAGAGCCAACCATGCCCCCTCGTCTCTTCGCGAACCGCACCACCT TTGCCGCGTTCGTTATCAGCTTTCTGCATGGGATGCTGATGTACTGGGAG CTATACTTCCTGCCGGTATACTTCCAAGGAGTTCAGCTAAGCACGTCGAC TCGATCCGGAGTGGAATTGTTGCCCACTGTAATCGTCACTGTCCCTGCCG CCATCGTTGCCGGTGCTCTTGTTACTAAGACCGGCCGGTACAAGCCCATA CAAATCAGTGGCTTCGCCTTCATGGCCCTCGGCATGGGCCTCTTCAGCCT TCTCGACCAGAACTCCAGCACAGGAGCCTGGGTCGGCTACCAGCTGCTAG CGGCCATTGGCTCAGGCTTCATCGTCACCTCAACCCTGCCAGCTGCCCAG GCCGCGCTGTCCGAGGCTGACGTGGCCACCTCGACAGCAACCTGGGCATT TTGCCGCGCATTTGGCGCCGTCTGGGGCGTCTCCATCCCGGCCGCTATCT TCAATAATCGATTCGCCGCGCAGGTGAGCGCGCAGAACGATACGGGACAC GCGGCGCAGGTGCTACAAAACACGGGTAACGCGTACCAGCAAGCCTCGCG GGAATTTGTCATGCAATTTTCGCCCGAGGTTCAATCGATGATTATCGACG CGTATACCGCAGCGCTCCAGCGAGTGTGGCAGATTTCTGTGGTGTTTGCT GGACTAGGCTTCTTATTTGCGTGGCTGGAGAAGGAGGTGGAGTTGCGAAC CACGCTGGAGACAGAATACGGGCCGGAAAAGAAAGAGCCGTCGCCCGAGG TGGAGGACGTTACAGTGTCCAAGTGAATGGCTGCTCGTGGTTGGCGATTC TGGCTGATTATTGCTGGACTGTCAATAACATCCCTCCTCACTGCGATCGA ATGTACGGTTCCATCGACTGCTCTGCCCACGATCTCGCGCGATTTGAACG CAGGAGAGTCTACCGCCGTCCAGCCGCTCTTTGGACAATTGGCCGACGTC TTCGGTCGACGATGGCCCCTGATCTCCGCAGTGGCTTTCTTTGCTCTAGG CAGTGGCATCAGCGGTGGTGCCAGTTCGACCGCGATGCTTATTGCCGGGC GCACAATCCAGGGAGTGGGCCTCGGAGGTGTCAACATGCTCATCGACGTG GTCGTCTGTGATCTCGTCCCCTTACGCGAGCGAGGCCAAGTGACCGCCCT CATCTTCGTCGTGTTCGCCGTGGGATCGTCCATCGGGCCCTTCATCGGGG GTGCCTTTACACAGCACGTCACCTGGCGGTGGGCATTCTATATCAGTCTT CCAATCGCCGGCAGCGCGATGGTGTTCATGATCCTCTTCCTCCAGGTCAA ATCTCAGAAGCACACCACCTTCGCGGACAAGATGAAACGCATTGACTGGC TAGGTAATACTATACTGGTCGCCGCGGTGGTAGCAGTTCTCATCGCGCTC AGTTTCGGTGGCACCTCATACCCCTGGTCAAGCTGGCGTGTCATTGTGCC GTTAGTGCTGGGACTCATTGGACTGATCGCCTTCGCCCTGGTGCAGGTGA CGCCCAAGCTCTGTCCAGAGCCAACCATGCCCCCTCGTCTCTTCGCGAAC CGCACCACCTTTGCCGCGTTCGTTATCAGCTTTCTGCATGGGATGCTGAT GTACTGGGAGCTATACTTCCTGCCGGTATACTTCCAAGGAGTTCAGCTAA GCACGTCGACTCGATCCGGAGTGGAATTGTTGCCCACTGTAATCGTCACT GTCCCTGCCGCCATCGTTGCCGGTGCTCTTGTTACTAAGACCGGCCGGTA CAAGCCCATACAAATCAGTGGCTTCGCCTTCATGGCCCTCGGCATGGGCC TCTTCAGCCTTCTCGACCAGAACTCCAGCACAGGAGCCTGGGTCGGCTAC CAGCTGCTAGCGGCCATTGGCTCAGGCTTCATCGTCACCTCAACCCTGCC AGCTGCCCAGGCCGCGCTGTCCGAGGCTGACGTGGCCACCTCGACAGCAA CCTGGGCATTTTGCCGCGCATTTGGCGCCGTCTGGGGCGTCTCCATCCCG GCCGCTATCTTCAATAATCGATTCGCCGCGCAGGTGAGCGCGCAGAACGA TACGGGACACGCGGCGCAGGTGCTACAAAACACGGGTAACGCGTACCAGC AAGCCTCGCGGGAATTTGTCATGCAATTTTCGCCCGAGGTTCAATCGATG ATTATCGACGCGTATACCGCAGCGCTCCAGCGAGTGTGGCAGATTTCTGT GGTGTTTGCTGGACTAGGCTTCTTATTTGCGTGGCTGGAGAAGGAGGTGG AGTTGCGAACCACGCTGGAGACAGAATACGGGCCGGAAAAGAAAGAGCCG TCGCCCGAGGTGGAGGACGTTACAGTGTCCAAGTGAATGGCTGCTCGTGG TTGGCGATTCTGGCTGATTATTGCTGGACTGTCAATAACATCCCTCCTCA CTGCGATCGAATGTACGGTTCCATCGACTGCTCTGCCCACGATCTCGCGC GATTTGAACGCAGGAGAGTC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | antiSMASH:Cluster_4.10 |
Note | antiSMASH:Cluster_4.9 |
Note | EggNog:ENOG41 |
Note | SECRETED:SignalP(1-23) |
Note | SMCOG1005: EmrB/QacA |
Note | SMCOG1005:Drug resistance transporter |
DBxref | InterPro:IPR036259 |
DBxref | InterPro:IPR020846 |
DBxref | InterPro:IPR011701 |
DBxref | PFAM:PF07690 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch4 | supercontig | ch4:4140405..4142072 - |
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