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KYF_005580-T1, KYF_005580-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005580-T1
Unique NameKYF_005580-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4176402..4176803+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005580-T1 ID=KYF_005580-T1|Name=KYF_005580-T1|organism=Aspergillus niger KYF3|type=mRNA|length=402bp|location=Sequence derived from alignment at ch4:4176402..4176803+ (Aspergillus niger KYF3)
ATGCCTTTCACTGCCTCGTAAGTCTTGCAACCCCTCGCGACGTCATCTTT
TGGCCATTTCCTATCCAGTCGCGCGCATACCTGGACCTTGACGAGCTGGA
GCTGTCTTGGGATAGCTTGCGATCGCAATGATCTGAATGACGAGAGCATA
GTGTCGTGGGTATGCTAACGCCGTTGGGACCATAGGGATATCTGCAAGAT
CATCTTTGCGATCATCTTGCCGCCACTGGGTGTTTTCCTGGAGCGAGGAT
GCGGTGCTGATTTCCTGATCAACATCTGTTTGACAATCCTGGGTTGGCTT
CCTGGTGTCATTCATGCCTTGTACGTGGCCCGCCAAGTGATGGATTTCCG
GAGATTCCGAGGCTAACTCGTTTCGTTCAGCTATATCATATTCAAATACT
AG
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Coding sequence (CDS) from alignment at ch4:4176402..4176803+

>KYF_005580-T1 ID=KYF_005580-T1|Name=KYF_005580-T1|organism=Aspergillus niger KYF3|type=CDS|length=522bp|location=Sequence derived from alignment at ch4:4176402..4176803+ (Aspergillus niger KYF3)
ATGCCTTTCACTGCCTCGGATATCTGCAAGATCATCTTTGCGATCATCTT
GCCGCCACTGGGTGTTTTCCTGGAGCGAGGATGCGGTGCTGATTTCCTGA
TCAACATCTGTTTGACAATCCTGGGTTGGCTTCCTGGTGTCATTCATGCC
TTCTATATCATATTCAAATACTAGATGCCTTTCACTGCCTCGGATATCTG
CAAGATCATCTTTGCGATCATCTTGCCGCCACTGGGTGTTTTCCTGGAGC
GAGGATGCGGTGCTGATTTCCTGATCAACATCTGTTTGACAATCCTGGGT
TGGCTTCCTGGTGTCATTCATGCCTTCTATATCATATTCAAATACTAGAT
GCCTTTCACTGCCTCGGATATCTGCAAGATCATCTTTGCGATCATCTTGC
CGCCACTGGGTGTTTTCCTGGAGCGAGGATGCGGTGCTGATTTCCTGATC
AACATCTGTTTGACAATCCTGGGTTGGCTTCCTGGTGTCATTCATGCCTT
CTATATCATATTCAAATACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PMP3KYF_005580Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005580-T1.exon1KYF_005580-T1.exon1Aspergillus niger KYF3exon
KYF_005580-T1.exon2KYF_005580-T1.exon2Aspergillus niger KYF3exon
KYF_005580-T1.exon3KYF_005580-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005580-T1.cdsKYF_005580-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005580-T1KYF_005580-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_4.10
NoteantiSMASH:Cluster_4.9
NoteEggNog:ENOG41
DBxrefInterPro:IPR000612
DBxrefPFAM:PF01679
Productplasma membrane proteolipid Pmp3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4176402..4176803 +
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