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KYF_005585-T1, KYF_005585-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005585-T1
Unique NameKYF_005585-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4190110..4190784-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005585-T1 ID=KYF_005585-T1|Name=KYF_005585-T1|organism=Aspergillus niger KYF3|type=mRNA|length=675bp|location=Sequence derived from alignment at ch4:4190110..4190784- (Aspergillus niger KYF3)
ATGGCCCCCGTTGCTGTACGTTTCCTTCCTTGAGACTGCTTTGCTGTTCT CCCCGAATGGGTCCATATCCATGAAGATGTTTTCTCTGCGTTGAAAAATG AGAGAATACACTTTTCATGGGAAGAAACCCCGGGGATCCGACATTATGGA ACAGTAGGCTAATCATATATTTTCGGACTATAGACTCGTGGTCGCAAGGC CCAGAAGGTCACCAAGAAGGTATGTGCTTATCGCAATCGCAATCGCAGGC GCAAGTAAAATTCGTGAGTACTAATTGTTTCTCTTATAGTTCGTCATCAA CGCTTCTCAGCCCGTGAGCGACAAGATCTTCGACCTCTCTGCTTTCGAGA AGTTCCTCCACGACCGCATCAAGGTCGAGGGCCGTGTCGGCAACCTCGGT GACAAGGTCGTCATCTCCCAGGCTGGTGACGGCAAGGTCGAGGTTGTTGC TCACATCCCCTTCTCTGGCCGCTACCTCAAGTACCTGTATGTTCCACCTT CCATTGATTTAATACAAGTTGGCAAGATGCTAATTGTTCCTCCAACAGCA CCAAGAAGTACCTCAAGAAGCAGCAGCTCCGTGACTGGCTCCGTGTCGTC TCCACCTCCAAGGGTGTCTACGAGCTCCGCTTCTACAACGTCGTCAACGA CGAGGGCGAGGAGGATGAGGAGTAA
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Coding sequence (CDS) from alignment at ch4:4190110..4190784-

>KYF_005585-T1 ID=KYF_005585-T1|Name=KYF_005585-T1|organism=Aspergillus niger KYF3|type=CDS|length=1500bp|location=Sequence derived from alignment at ch4:4190110..4190784- (Aspergillus niger KYF3)
CACCAAGAAGTACCTCAAGAAGCAGCAGCTCCGTGACTGGCTCCGTGTCG
TCTCCACCTCCAAGGGTGTCTACGAGCTCCGCTTCTACAACGTCGTCAAC
GACGAGGGCGAGGAGGATGAGGAGTAATTCGTCATCAACGCTTCTCAGCC
CGTGAGCGACAAGATCTTCGACCTCTCTGCTTTCGAGAAGTTCCTCCACG
ACCGCATCAAGGTCGAGGGCCGTGTCGGCAACCTCGGTGACAAGGTCGTC
ATCTCCCAGGCTGGTGACGGCAAGGTCGAGGTTGTTGCTCACATCCCCTT
CTCTGGCCGCTACCTCAAGTACCTACTCGTGGTCGCAAGGCCCAGAAGGT
CACCAAGAAGATGGCCCCCGTTGCTCACCAAGAAGTACCTCAAGAAGCAG
CAGCTCCGTGACTGGCTCCGTGTCGTCTCCACCTCCAAGGGTGTCTACGA
GCTCCGCTTCTACAACGTCGTCAACGACGAGGGCGAGGAGGATGAGGAGT
AATTCGTCATCAACGCTTCTCAGCCCGTGAGCGACAAGATCTTCGACCTC
TCTGCTTTCGAGAAGTTCCTCCACGACCGCATCAAGGTCGAGGGCCGTGT
CGGCAACCTCGGTGACAAGGTCGTCATCTCCCAGGCTGGTGACGGCAAGG
TCGAGGTTGTTGCTCACATCCCCTTCTCTGGCCGCTACCTCAAGTACCTA
CTCGTGGTCGCAAGGCCCAGAAGGTCACCAAGAAGATGGCCCCCGTTGCT
CACCAAGAAGTACCTCAAGAAGCAGCAGCTCCGTGACTGGCTCCGTGTCG
TCTCCACCTCCAAGGGTGTCTACGAGCTCCGCTTCTACAACGTCGTCAAC
GACGAGGGCGAGGAGGATGAGGAGTAATTCGTCATCAACGCTTCTCAGCC
CGTGAGCGACAAGATCTTCGACCTCTCTGCTTTCGAGAAGTTCCTCCACG
ACCGCATCAAGGTCGAGGGCCGTGTCGGCAACCTCGGTGACAAGGTCGTC
ATCTCCCAGGCTGGTGACGGCAAGGTCGAGGTTGTTGCTCACATCCCCTT
CTCTGGCCGCTACCTCAAGTACCTACTCGTGGTCGCAAGGCCCAGAAGGT
CACCAAGAAGATGGCCCCCGTTGCTCACCAAGAAGTACCTCAAGAAGCAG
CAGCTCCGTGACTGGCTCCGTGTCGTCTCCACCTCCAAGGGTGTCTACGA
GCTCCGCTTCTACAACGTCGTCAACGACGAGGGCGAGGAGGATGAGGAGT
AATTCGTCATCAACGCTTCTCAGCCCGTGAGCGACAAGATCTTCGACCTC
TCTGCTTTCGAGAAGTTCCTCCACGACCGCATCAAGGTCGAGGGCCGTGT
CGGCAACCTCGGTGACAAGGTCGTCATCTCCCAGGCTGGTGACGGCAAGG
TCGAGGTTGTTGCTCACATCCCCTTCTCTGGCCGCTACCTCAAGTACCTA
CTCGTGGTCGCAAGGCCCAGAAGGTCACCAAGAAGATGGCCCCCGTTGCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL22KYF_005585Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005585-T1KYF_005585-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005585-T1.cdsKYF_005585-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005585-T1.exon4KYF_005585-T1.exon4Aspergillus niger KYF3exon
KYF_005585-T1.exon3KYF_005585-T1.exon3Aspergillus niger KYF3exon
KYF_005585-T1.exon2KYF_005585-T1.exon2Aspergillus niger KYF3exon
KYF_005585-T1.exon1KYF_005585-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR038526
DBxrefInterPro:IPR002671
DBxrefPFAM:PF01776
Product60S ribosomal protein L22
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4190110..4190784 -