|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4560765..4561986+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005711-T1 ID=KYF_005711-T1|Name=KYF_005711-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1222bp|location=Sequence derived from alignment at ch4:4560765..4561986+ (Aspergillus niger KYF3)
ATGCCTGATAGGAAATCCGTTCAGCCTGCTAAGAAGAGAAAGGTCCGCCC
CATCTGATGTCCGTGGCATGTTGACCACAGACGTCTCACCATTGGCTTTT
CCGCATCTGGTAATCAATGTCTAACGCGTGGCGGCACAGGGAGGTGGCCA
ATGGCAGAAACACCAACAAGGCAATAAGTCGGGCATTGAGGGAGGCGACT
GGGGAGTCTTCGTGTCGTGCGATCTGGGAAAGGAAGGGAAATGTATGGCA
GAGGTAGTGGATGTTTTCTCGCAGGTTAGTAGCATGAAGGACAGGGCTTT
GTGAATAGAAGGCGACCCACGGTATCTGGCAGATTGATGCGATCTGATAT
GCTCATCCATCTGACTTGTGTTATTTCCCAGAGTGTGGAATCATCCAGCA
GTGACAGTCATGGAGGCAAGCTCGACTCGGATGAGGAGGATGACGATGAT
GACATCGAGGCCCAAATCAGAAGAGAGGTCGAAGGCCTGAAGCCCAGCGC
GAGCAAGTCCCGCCCGTTTCATGCCATCAGAATGGATTTGCCATGTCGTG
CGTTAACCCTCGTTCTCCTCCTTAGATTGATCTAGGTTTTGAGAGACGCT
AATATACTTCAGTGTTGTTTGTGCGATTTGACAAATCCATCAATCCAGAG
GAAATGGTACATCAGCTTTGCTTAGACGCAGCTGCTAATCCTGAAAAGAA
ACGATCCCGATGGATCCAACGCATGACACCTGCAATTTCCGTTCGCAAAA
CTCTCAGTGTCGACCTGGAGTCTTTTGCACGGGAAATACTCAAACCGCAT
TTCCATTCCGGGGGACCTCCCAAAAAGGTGAGTCTCGGTCTCACCGTAAG
GCTTAGATGGTCATGAACTCCCATTAACCAGAAAATTTCAGTACGCAATT
CGACCTGTGGTGAGAAGCAACAAGAAGTTCAACCGCGACATTGTCATCAA
GACCGTTGCAGATGTCGTGGGGCCCGAACATCCCGTTGATCTCAAGAACT
ATGACTTGATCATTCTCGTCACCGTTATCCAGGTCAGTTTTCTACGGACG
TAGTGTGGTGTTTAAGTCGCTCATACAAGTACCGTAACTGACAATAAATT
ATCAGAATGTCATTGGCATGAGTGTTGCCGGAAGTGACTATGATCGGTTA
AAGAAGTATAACCTGGCCGAGTTATACAGTCCAGCACCTACGTCAGAGGC
CGCCGAATCTACTAAGGACTAA back to topCoding sequence (CDS) from alignment at ch4:4560765..4561986+ >KYF_005711-T1 ID=KYF_005711-T1|Name=KYF_005711-T1|organism=Aspergillus niger KYF3|type=CDS|length=4896bp|location=Sequence derived from alignment at ch4:4560765..4561986+ (Aspergillus niger KYF3)
ATGCCTGATAGGAAATCCGTTCAGCCTGCTAAGAAGAGAAAGGGAGGTGG
CCAATGGCAGAAACACCAACAAGGCAATAAGTCGGGCATTGAGGGAGGCG
ACTGGGGAGTCTTCGTGTCGTGCGATCTGGGAAAGGAAGGGAAATGTATG
GCAGAGGTAGTGGATGTTTTCTCGCAGAGTGTGGAATCATCCAGCAGTGA
CAGTCATGGAGGCAAGCTCGACTCGGATGAGGAGGATGACGATGATGACA
TCGAGGCCCAAATCAGAAGAGAGGTCGAAGGCCTGAAGCCCAGCGCGAGC
AAGTCCCGCCCGTTTCATGCCATCAGAATGGATTTGCCATGTCTGTTGTT
TGTGCGATTTGACAAATCCATCAATCCAGAGGAAATGGTACATCAGCTTT
GCTTAGACGCAGCTGCTAATCCTGAAAAGAAACGATCCCGATGGATCCAA
CGCATGACACCTGCAATTTCCGTTCGCAAAACTCTCAGTGTCGACCTGGA
GTCTTTTGCACGGGAAATACTCAAACCGCATTTCCATTCCGGGGGACCTC
CCAAAAAGTACGCAATTCGACCTGTGGTGAGAAGCAACAAGAAGTTCAAC
CGCGACATTGTCATCAAGACCGTTGCAGATGTCGTGGGGCCCGAACATCC
CGTTGATCTCAAGAACTATGACTTGATCATTCTCGTCACCGTTATCCAGA
ATGTCATTGGCATGAGTGTTGCCGGAAGTGACTATGATCGGTTAAAGAAG
TATAACCTGGCCGAGTTATACAGTCCAGCACCTACGTCAGAGGCCGCCGA
ATCTACTAAGGACTAAATGCCTGATAGGAAATCCGTTCAGCCTGCTAAGA
AGAGAAAGGGAGGTGGCCAATGGCAGAAACACCAACAAGGCAATAAGTCG
GGCATTGAGGGAGGCGACTGGGGAGTCTTCGTGTCGTGCGATCTGGGAAA
GGAAGGGAAATGTATGGCAGAGGTAGTGGATGTTTTCTCGCAGAGTGTGG
AATCATCCAGCAGTGACAGTCATGGAGGCAAGCTCGACTCGGATGAGGAG
GATGACGATGATGACATCGAGGCCCAAATCAGAAGAGAGGTCGAAGGCCT
GAAGCCCAGCGCGAGCAAGTCCCGCCCGTTTCATGCCATCAGAATGGATT
TGCCATGTCTGTTGTTTGTGCGATTTGACAAATCCATCAATCCAGAGGAA
ATGGTACATCAGCTTTGCTTAGACGCAGCTGCTAATCCTGAAAAGAAACG
ATCCCGATGGATCCAACGCATGACACCTGCAATTTCCGTTCGCAAAACTC
TCAGTGTCGACCTGGAGTCTTTTGCACGGGAAATACTCAAACCGCATTTC
CATTCCGGGGGACCTCCCAAAAAGTACGCAATTCGACCTGTGGTGAGAAG
CAACAAGAAGTTCAACCGCGACATTGTCATCAAGACCGTTGCAGATGTCG
TGGGGCCCGAACATCCCGTTGATCTCAAGAACTATGACTTGATCATTCTC
GTCACCGTTATCCAGAATGTCATTGGCATGAGTGTTGCCGGAAGTGACTA
TGATCGGTTAAAGAAGTATAACCTGGCCGAGTTATACAGTCCAGCACCTA
CGTCAGAGGCCGCCGAATCTACTAAGGACTAAATGCCTGATAGGAAATCC
GTTCAGCCTGCTAAGAAGAGAAAGGGAGGTGGCCAATGGCAGAAACACCA
ACAAGGCAATAAGTCGGGCATTGAGGGAGGCGACTGGGGAGTCTTCGTGT
CGTGCGATCTGGGAAAGGAAGGGAAATGTATGGCAGAGGTAGTGGATGTT
TTCTCGCAGAGTGTGGAATCATCCAGCAGTGACAGTCATGGAGGCAAGCT
CGACTCGGATGAGGAGGATGACGATGATGACATCGAGGCCCAAATCAGAA
GAGAGGTCGAAGGCCTGAAGCCCAGCGCGAGCAAGTCCCGCCCGTTTCAT
GCCATCAGAATGGATTTGCCATGTCTGTTGTTTGTGCGATTTGACAAATC
CATCAATCCAGAGGAAATGGTACATCAGCTTTGCTTAGACGCAGCTGCTA
ATCCTGAAAAGAAACGATCCCGATGGATCCAACGCATGACACCTGCAATT
TCCGTTCGCAAAACTCTCAGTGTCGACCTGGAGTCTTTTGCACGGGAAAT
ACTCAAACCGCATTTCCATTCCGGGGGACCTCCCAAAAAGTACGCAATTC
GACCTGTGGTGAGAAGCAACAAGAAGTTCAACCGCGACATTGTCATCAAG
ACCGTTGCAGATGTCGTGGGGCCCGAACATCCCGTTGATCTCAAGAACTA
TGACTTGATCATTCTCGTCACCGTTATCCAGAATGTCATTGGCATGAGTG
TTGCCGGAAGTGACTATGATCGGTTAAAGAAGTATAACCTGGCCGAGTTA
TACAGTCCAGCACCTACGTCAGAGGCCGCCGAATCTACTAAGGACTAAAT
GCCTGATAGGAAATCCGTTCAGCCTGCTAAGAAGAGAAAGGGAGGTGGCC
AATGGCAGAAACACCAACAAGGCAATAAGTCGGGCATTGAGGGAGGCGAC
TGGGGAGTCTTCGTGTCGTGCGATCTGGGAAAGGAAGGGAAATGTATGGC
AGAGGTAGTGGATGTTTTCTCGCAGAGTGTGGAATCATCCAGCAGTGACA
GTCATGGAGGCAAGCTCGACTCGGATGAGGAGGATGACGATGATGACATC
GAGGCCCAAATCAGAAGAGAGGTCGAAGGCCTGAAGCCCAGCGCGAGCAA
GTCCCGCCCGTTTCATGCCATCAGAATGGATTTGCCATGTCTGTTGTTTG
TGCGATTTGACAAATCCATCAATCCAGAGGAAATGGTACATCAGCTTTGC
TTAGACGCAGCTGCTAATCCTGAAAAGAAACGATCCCGATGGATCCAACG
CATGACACCTGCAATTTCCGTTCGCAAAACTCTCAGTGTCGACCTGGAGT
CTTTTGCACGGGAAATACTCAAACCGCATTTCCATTCCGGGGGACCTCCC
AAAAAGTACGCAATTCGACCTGTGGTGAGAAGCAACAAGAAGTTCAACCG
CGACATTGTCATCAAGACCGTTGCAGATGTCGTGGGGCCCGAACATCCCG
TTGATCTCAAGAACTATGACTTGATCATTCTCGTCACCGTTATCCAGAAT
GTCATTGGCATGAGTGTTGCCGGAAGTGACTATGATCGGTTAAAGAAGTA
TAACCTGGCCGAGTTATACAGTCCAGCACCTACGTCAGAGGCCGCCGAAT
CTACTAAGGACTAAATGCCTGATAGGAAATCCGTTCAGCCTGCTAAGAAG
AGAAAGGGAGGTGGCCAATGGCAGAAACACCAACAAGGCAATAAGTCGGG
CATTGAGGGAGGCGACTGGGGAGTCTTCGTGTCGTGCGATCTGGGAAAGG
AAGGGAAATGTATGGCAGAGGTAGTGGATGTTTTCTCGCAGAGTGTGGAA
TCATCCAGCAGTGACAGTCATGGAGGCAAGCTCGACTCGGATGAGGAGGA
TGACGATGATGACATCGAGGCCCAAATCAGAAGAGAGGTCGAAGGCCTGA
AGCCCAGCGCGAGCAAGTCCCGCCCGTTTCATGCCATCAGAATGGATTTG
CCATGTCTGTTGTTTGTGCGATTTGACAAATCCATCAATCCAGAGGAAAT
GGTACATCAGCTTTGCTTAGACGCAGCTGCTAATCCTGAAAAGAAACGAT
CCCGATGGATCCAACGCATGACACCTGCAATTTCCGTTCGCAAAACTCTC
AGTGTCGACCTGGAGTCTTTTGCACGGGAAATACTCAAACCGCATTTCCA
TTCCGGGGGACCTCCCAAAAAGTACGCAATTCGACCTGTGGTGAGAAGCA
ACAAGAAGTTCAACCGCGACATTGTCATCAAGACCGTTGCAGATGTCGTG
GGGCCCGAACATCCCGTTGATCTCAAGAACTATGACTTGATCATTCTCGT
CACCGTTATCCAGAATGTCATTGGCATGAGTGTTGCCGGAAGTGACTATG
ATCGGTTAAAGAAGTATAACCTGGCCGAGTTATACAGTCCAGCACCTACG
TCAGAGGCCGCCGAATCTACTAAGGACTAAATGCCTGATAGGAAATCCGT
TCAGCCTGCTAAGAAGAGAAAGGGAGGTGGCCAATGGCAGAAACACCAAC
AAGGCAATAAGTCGGGCATTGAGGGAGGCGACTGGGGAGTCTTCGTGTCG
TGCGATCTGGGAAAGGAAGGGAAATGTATGGCAGAGGTAGTGGATGTTTT
CTCGCAGAGTGTGGAATCATCCAGCAGTGACAGTCATGGAGGCAAGCTCG
ACTCGGATGAGGAGGATGACGATGATGACATCGAGGCCCAAATCAGAAGA
GAGGTCGAAGGCCTGAAGCCCAGCGCGAGCAAGTCCCGCCCGTTTCATGC
CATCAGAATGGATTTGCCATGTCTGTTGTTTGTGCGATTTGACAAATCCA
TCAATCCAGAGGAAATGGTACATCAGCTTTGCTTAGACGCAGCTGCTAAT
CCTGAAAAGAAACGATCCCGATGGATCCAACGCATGACACCTGCAATTTC
CGTTCGCAAAACTCTCAGTGTCGACCTGGAGTCTTTTGCACGGGAAATAC
TCAAACCGCATTTCCATTCCGGGGGACCTCCCAAAAAGTACGCAATTCGA
CCTGTGGTGAGAAGCAACAAGAAGTTCAACCGCGACATTGTCATCAAGAC
CGTTGCAGATGTCGTGGGGCCCGAACATCCCGTTGATCTCAAGAACTATG
ACTTGATCATTCTCGTCACCGTTATCCAGAATGTCATTGGCATGAGTGTT
GCCGGAAGTGACTATGATCGGTTAAAGAAGTATAACCTGGCCGAGTTATA
CAGTCCAGCACCTACGTCAGAGGCCGCCGAATCTACTAAGGACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006400 | tRNA modification |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264829 |
| DBxref | InterPro:IPR040183 |
| DBxref | InterPro:IPR004114 |
| DBxref | PFAM:PF02926 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4560765..4561986 + |
|
