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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5001829..5003858- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005843-T1 ID=KYF_005843-T1|Name=KYF_005843-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2030bp|location=Sequence derived from alignment at ch4:5001829..5003858- (Aspergillus niger KYF3)
ATGAAGCGCAAGTTGGATGCTAACGATGTTCCCTCCCCCGAAGTTGCGGA
GACTAAGGAGACCTCCGATGCGGACGAGGCCGACTTTGAAAGCCTCAACC
TGGATCCGCGACTGCGCCAAGCCTTGATCAAAGAGAAGTTCACCAAGCCT
ACGCCCGTCCAGGCCAAGGCTATTCCTCTGGCGCTCGCAGGCAAAGATAT
CCTTGGTGCGTACATCCTGGTGCCTGTGGTGGATGATGAGTATACTAACA
ATACCAGCTCGTGCAAAGACCGGCTCCGGAAAGACCGCCGCATATGTCCT
CCCTATTCTTCAGACCATTCTTCAGAAGAAAGCTGTCAGTACTTTCCAGG
GAAGATGAATTAAAAAATTGAGACAAGCTAAATTGTATCATGCTTTAGGC
CGACCCCTCGTTGAAAGCCACCACTGGCCTCATCCTCGTCCCCACTCGAG
AGCTTGCAGAACAGGTCCAAAAAGTCGTCACCACATTCGCTGCTTTCTGC
GGAAAGGATGTCCGCTCTGTGAACTTGACTCAGAAGGTTTCCGAGGCCGT
ACAGCGGACTATGCTCTCTGACTACCCTGATATCGTCATCTCCACCCCCG
CTCGTGTGATTGCCAACCTCGGAAACTCCTCTCTTTCGCTGGATAACCTG
ACGCACCTCGTTATCGACGAAGCCGACTTGGTCCTTTCATACGGATACGA
TGAAGACATCAATGCGCTTTCCAAGGCGATCCCCCGTGGCGTACAGACCT
TCCTCATGAGTGCTACGCTCACCTCGGAAGTGGATACCTTGAAGGGATTG
TTCTGTCGCAGCCCTGTTGTGCTGAAGTTGGAGGATAAGGAGGAGAAAGG
CGCCGGTGTTAGCCAGTTTGTCGTCAAGTAAGCCTCACATGTACACGGCG
AAGGATTTGCAAGCCTCATACTAACTGTTTCGCTCATCAGATGCGCAGAG
GATGAGAAATTCCTCCTGACATATGTTATTTTCAAGCTTCAGCTCATCAA
GGGCAAAGTCATCATATTCGTCGGAGACATCGACCGTTGCTATCGCCTCA
AGCTTTTCCTGGAACAATTCGGCGTCAAGAGCTGTGTGCTCAACTCTGAG
TTGCCAGTGAACTCCCGAATCCACGTCGTCCAGGAGTTCAACAAGGGTGT
TTACGACATCATCATTGCTGCAGATGACCAAGAAGTCCTCGGATCTAAGT
CTAAGAAGGCCAAGAATGCCGGTGCCGATGAGGAGGAGGAAGCTGCTGGT
GTCATGGGCTCGAGTGATGACGAAGAGGCTGAAGACGACAAGAAGTCGAA
TCGTCCCGATAAGCGCCGCAAGCTTACCGCGAAAGAAAAGGACTATGGTA
TCTCTCGTGGTATCGACTTCCAGAACGTGGCCTGCGTCTTGAACTTTGAC
CTCCCCACAACCGCCAAATCCTACACACACCGCATTGGACGAACCGGCCG
TGGCGGCAAGACCGGCATGGCGCTCTCGTTCGTCGTCCCGGCAGACCAGT
ACGGAAAGCACAAACCCACTTCCTTCCCCACCGCCAAACATGATGAAGCC
GTCCTGGCCAAGATCGTCAAACGTCAATCCAAACATGGCCACGAAGTCAA
GCCCTACCACTTTGAGATGAGTCAAGTCGACGCCTTCCGCTACCGTATGA
CCGACGGTCTTCGCGCCATCACCCGACTTGCCGTTCAGGAAGCCCGTGCT
CGTGAGATCCGTCAGGAGCTGGTCAAGAGCGAGAAACTGAAGCGCCACTT
CGAAGACAACCCCGATGAGCTGCGCCAGCTCCGTCACGATGGCGAGTTGC
GCTCCGCACGTATCCAACCCCACCTCAAACACATCCCCGAATACCTGATG
CCGTCCAAGGGTCGCAAGGGCATTTCCAGTGAGGACGTCGGCTTCGTTGG
GTTCCGGAAATCCAGCGACAACCGTATCCGCAAGGCTAGAGATAGGAACC
GCGCCAAGGGCAAGGGCCGCAAGCCGTCAGGTGTTAGAAAGGTTGATCCG
TTGAAGACGTTCAATCGGGGTCGGAAATAG back to topCoding sequence (CDS) from alignment at ch4:5001829..5003858- >KYF_005843-T1 ID=KYF_005843-T1|Name=KYF_005843-T1|organism=Aspergillus niger KYF3|type=CDS|length=7404bp|location=Sequence derived from alignment at ch4:5001829..5003858- (Aspergillus niger KYF3)
ATGCGCAGAGGATGAGAAATTCCTCCTGACATATGTTATTTTCAAGCTTC
AGCTCATCAAGGGCAAAGTCATCATATTCGTCGGAGACATCGACCGTTGC
TATCGCCTCAAGCTTTTCCTGGAACAATTCGGCGTCAAGAGCTGTGTGCT
CAACTCTGAGTTGCCAGTGAACTCCCGAATCCACGTCGTCCAGGAGTTCA
ACAAGGGTGTTTACGACATCATCATTGCTGCAGATGACCAAGAAGTCCTC
GGATCTAAGTCTAAGAAGGCCAAGAATGCCGGTGCCGATGAGGAGGAGGA
AGCTGCTGGTGTCATGGGCTCGAGTGATGACGAAGAGGCTGAAGACGACA
AGAAGTCGAATCGTCCCGATAAGCGCCGCAAGCTTACCGCGAAAGAAAAG
GACTATGGTATCTCTCGTGGTATCGACTTCCAGAACGTGGCCTGCGTCTT
GAACTTTGACCTCCCCACAACCGCCAAATCCTACACACACCGCATTGGAC
GAACCGGCCGTGGCGGCAAGACCGGCATGGCGCTCTCGTTCGTCGTCCCG
GCAGACCAGTACGGAAAGCACAAACCCACTTCCTTCCCCACCGCCAAACA
TGATGAAGCCGTCCTGGCCAAGATCGTCAAACGTCAATCCAAACATGGCC
ACGAAGTCAAGCCCTACCACTTTGAGATGAGTCAAGTCGACGCCTTCCGC
TACCGTATGACCGACGGTCTTCGCGCCATCACCCGACTTGCCGTTCAGGA
AGCCCGTGCTCGTGAGATCCGTCAGGAGCTGGTCAAGAGCGAGAAACTGA
AGCGCCACTTCGAAGACAACCCCGATGAGCTGCGCCAGCTCCGTCACGAT
GGCGAGTTGCGCTCCGCACGTATCCAACCCCACCTCAAACACATCCCCGA
ATACCTGATGCCGTCCAAGGGTCGCAAGGGCATTTCCAGTGAGGACGTCG
GCTTCGTTGGGTTCCGGAAATCCAGCGACAACCGTATCCGCAAGGCTAGA
GATAGGAACCGCGCCAAGGGCAAGGGCCGCAAGCCGTCAGGTGTTAGAAA
GGTTGATCCGTTGAAGACGTTCAATCGGGGTCGGAAATAGGCCGACCCCT
CGTTGAAAGCCACCACTGGCCTCATCCTCGTCCCCACTCGAGAGCTTGCA
GAACAGGTCCAAAAAGTCGTCACCACATTCGCTGCTTTCTGCGGAAAGGA
TGTCCGCTCTGTGAACTTGACTCAGAAGGTTTCCGAGGCCGTACAGCGGA
CTATGCTCTCTGACTACCCTGATATCGTCATCTCCACCCCCGCTCGTGTG
ATTGCCAACCTCGGAAACTCCTCTCTTTCGCTGGATAACCTGACGCACCT
CGTTATCGACGAAGCCGACTTGGTCCTTTCATACGGATACGATGAAGACA
TCAATGCGCTTTCCAAGGCGATCCCCCGTGGCGTACAGACCTTCCTCATG
AGTGCTACGCTCACCTCGGAAGTGGATACCTTGAAGGGATTGTTCTGTCG
CAGCCCTGTTGTGCTGAAGTTGGAGGATAAGGAGGAGAAAGGCGCCGGTG
TTAGCCAGTTTGTCGTCAACTCGTGCAAAGACCGGCTCCGGAAAGACCGC
CGCATATGTCCTCCCTATTCTTCAGACCATTCTTCAGAAGAAAGCTATGA
AGCGCAAGTTGGATGCTAACGATGTTCCCTCCCCCGAAGTTGCGGAGACT
AAGGAGACCTCCGATGCGGACGAGGCCGACTTTGAAAGCCTCAACCTGGA
TCCGCGACTGCGCCAAGCCTTGATCAAAGAGAAGTTCACCAAGCCTACGC
CCGTCCAGGCCAAGGCTATTCCTCTGGCGCTCGCAGGCAAAGATATCCTT
GATGCGCAGAGGATGAGAAATTCCTCCTGACATATGTTATTTTCAAGCTT
CAGCTCATCAAGGGCAAAGTCATCATATTCGTCGGAGACATCGACCGTTG
CTATCGCCTCAAGCTTTTCCTGGAACAATTCGGCGTCAAGAGCTGTGTGC
TCAACTCTGAGTTGCCAGTGAACTCCCGAATCCACGTCGTCCAGGAGTTC
AACAAGGGTGTTTACGACATCATCATTGCTGCAGATGACCAAGAAGTCCT
CGGATCTAAGTCTAAGAAGGCCAAGAATGCCGGTGCCGATGAGGAGGAGG
AAGCTGCTGGTGTCATGGGCTCGAGTGATGACGAAGAGGCTGAAGACGAC
AAGAAGTCGAATCGTCCCGATAAGCGCCGCAAGCTTACCGCGAAAGAAAA
GGACTATGGTATCTCTCGTGGTATCGACTTCCAGAACGTGGCCTGCGTCT
TGAACTTTGACCTCCCCACAACCGCCAAATCCTACACACACCGCATTGGA
CGAACCGGCCGTGGCGGCAAGACCGGCATGGCGCTCTCGTTCGTCGTCCC
GGCAGACCAGTACGGAAAGCACAAACCCACTTCCTTCCCCACCGCCAAAC
ATGATGAAGCCGTCCTGGCCAAGATCGTCAAACGTCAATCCAAACATGGC
CACGAAGTCAAGCCCTACCACTTTGAGATGAGTCAAGTCGACGCCTTCCG
CTACCGTATGACCGACGGTCTTCGCGCCATCACCCGACTTGCCGTTCAGG
AAGCCCGTGCTCGTGAGATCCGTCAGGAGCTGGTCAAGAGCGAGAAACTG
AAGCGCCACTTCGAAGACAACCCCGATGAGCTGCGCCAGCTCCGTCACGA
TGGCGAGTTGCGCTCCGCACGTATCCAACCCCACCTCAAACACATCCCCG
AATACCTGATGCCGTCCAAGGGTCGCAAGGGCATTTCCAGTGAGGACGTC
GGCTTCGTTGGGTTCCGGAAATCCAGCGACAACCGTATCCGCAAGGCTAG
AGATAGGAACCGCGCCAAGGGCAAGGGCCGCAAGCCGTCAGGTGTTAGAA
AGGTTGATCCGTTGAAGACGTTCAATCGGGGTCGGAAATAGGCCGACCCC
TCGTTGAAAGCCACCACTGGCCTCATCCTCGTCCCCACTCGAGAGCTTGC
AGAACAGGTCCAAAAAGTCGTCACCACATTCGCTGCTTTCTGCGGAAAGG
ATGTCCGCTCTGTGAACTTGACTCAGAAGGTTTCCGAGGCCGTACAGCGG
ACTATGCTCTCTGACTACCCTGATATCGTCATCTCCACCCCCGCTCGTGT
GATTGCCAACCTCGGAAACTCCTCTCTTTCGCTGGATAACCTGACGCACC
TCGTTATCGACGAAGCCGACTTGGTCCTTTCATACGGATACGATGAAGAC
ATCAATGCGCTTTCCAAGGCGATCCCCCGTGGCGTACAGACCTTCCTCAT
GAGTGCTACGCTCACCTCGGAAGTGGATACCTTGAAGGGATTGTTCTGTC
GCAGCCCTGTTGTGCTGAAGTTGGAGGATAAGGAGGAGAAAGGCGCCGGT
GTTAGCCAGTTTGTCGTCAACTCGTGCAAAGACCGGCTCCGGAAAGACCG
CCGCATATGTCCTCCCTATTCTTCAGACCATTCTTCAGAAGAAAGCTATG
AAGCGCAAGTTGGATGCTAACGATGTTCCCTCCCCCGAAGTTGCGGAGAC
TAAGGAGACCTCCGATGCGGACGAGGCCGACTTTGAAAGCCTCAACCTGG
ATCCGCGACTGCGCCAAGCCTTGATCAAAGAGAAGTTCACCAAGCCTACG
CCCGTCCAGGCCAAGGCTATTCCTCTGGCGCTCGCAGGCAAAGATATCCT
TGATGCGCAGAGGATGAGAAATTCCTCCTGACATATGTTATTTTCAAGCT
TCAGCTCATCAAGGGCAAAGTCATCATATTCGTCGGAGACATCGACCGTT
GCTATCGCCTCAAGCTTTTCCTGGAACAATTCGGCGTCAAGAGCTGTGTG
CTCAACTCTGAGTTGCCAGTGAACTCCCGAATCCACGTCGTCCAGGAGTT
CAACAAGGGTGTTTACGACATCATCATTGCTGCAGATGACCAAGAAGTCC
TCGGATCTAAGTCTAAGAAGGCCAAGAATGCCGGTGCCGATGAGGAGGAG
GAAGCTGCTGGTGTCATGGGCTCGAGTGATGACGAAGAGGCTGAAGACGA
CAAGAAGTCGAATCGTCCCGATAAGCGCCGCAAGCTTACCGCGAAAGAAA
AGGACTATGGTATCTCTCGTGGTATCGACTTCCAGAACGTGGCCTGCGTC
TTGAACTTTGACCTCCCCACAACCGCCAAATCCTACACACACCGCATTGG
ACGAACCGGCCGTGGCGGCAAGACCGGCATGGCGCTCTCGTTCGTCGTCC
CGGCAGACCAGTACGGAAAGCACAAACCCACTTCCTTCCCCACCGCCAAA
CATGATGAAGCCGTCCTGGCCAAGATCGTCAAACGTCAATCCAAACATGG
CCACGAAGTCAAGCCCTACCACTTTGAGATGAGTCAAGTCGACGCCTTCC
GCTACCGTATGACCGACGGTCTTCGCGCCATCACCCGACTTGCCGTTCAG
GAAGCCCGTGCTCGTGAGATCCGTCAGGAGCTGGTCAAGAGCGAGAAACT
GAAGCGCCACTTCGAAGACAACCCCGATGAGCTGCGCCAGCTCCGTCACG
ATGGCGAGTTGCGCTCCGCACGTATCCAACCCCACCTCAAACACATCCCC
GAATACCTGATGCCGTCCAAGGGTCGCAAGGGCATTTCCAGTGAGGACGT
CGGCTTCGTTGGGTTCCGGAAATCCAGCGACAACCGTATCCGCAAGGCTA
GAGATAGGAACCGCGCCAAGGGCAAGGGCCGCAAGCCGTCAGGTGTTAGA
AAGGTTGATCCGTTGAAGACGTTCAATCGGGGTCGGAAATAGGCCGACCC
CTCGTTGAAAGCCACCACTGGCCTCATCCTCGTCCCCACTCGAGAGCTTG
CAGAACAGGTCCAAAAAGTCGTCACCACATTCGCTGCTTTCTGCGGAAAG
GATGTCCGCTCTGTGAACTTGACTCAGAAGGTTTCCGAGGCCGTACAGCG
GACTATGCTCTCTGACTACCCTGATATCGTCATCTCCACCCCCGCTCGTG
TGATTGCCAACCTCGGAAACTCCTCTCTTTCGCTGGATAACCTGACGCAC
CTCGTTATCGACGAAGCCGACTTGGTCCTTTCATACGGATACGATGAAGA
CATCAATGCGCTTTCCAAGGCGATCCCCCGTGGCGTACAGACCTTCCTCA
TGAGTGCTACGCTCACCTCGGAAGTGGATACCTTGAAGGGATTGTTCTGT
CGCAGCCCTGTTGTGCTGAAGTTGGAGGATAAGGAGGAGAAAGGCGCCGG
TGTTAGCCAGTTTGTCGTCAACTCGTGCAAAGACCGGCTCCGGAAAGACC
GCCGCATATGTCCTCCCTATTCTTCAGACCATTCTTCAGAAGAAAGCTAT
GAAGCGCAAGTTGGATGCTAACGATGTTCCCTCCCCCGAAGTTGCGGAGA
CTAAGGAGACCTCCGATGCGGACGAGGCCGACTTTGAAAGCCTCAACCTG
GATCCGCGACTGCGCCAAGCCTTGATCAAAGAGAAGTTCACCAAGCCTAC
GCCCGTCCAGGCCAAGGCTATTCCTCTGGCGCTCGCAGGCAAAGATATCC
TTGATGCGCAGAGGATGAGAAATTCCTCCTGACATATGTTATTTTCAAGC
TTCAGCTCATCAAGGGCAAAGTCATCATATTCGTCGGAGACATCGACCGT
TGCTATCGCCTCAAGCTTTTCCTGGAACAATTCGGCGTCAAGAGCTGTGT
GCTCAACTCTGAGTTGCCAGTGAACTCCCGAATCCACGTCGTCCAGGAGT
TCAACAAGGGTGTTTACGACATCATCATTGCTGCAGATGACCAAGAAGTC
CTCGGATCTAAGTCTAAGAAGGCCAAGAATGCCGGTGCCGATGAGGAGGA
GGAAGCTGCTGGTGTCATGGGCTCGAGTGATGACGAAGAGGCTGAAGACG
ACAAGAAGTCGAATCGTCCCGATAAGCGCCGCAAGCTTACCGCGAAAGAA
AAGGACTATGGTATCTCTCGTGGTATCGACTTCCAGAACGTGGCCTGCGT
CTTGAACTTTGACCTCCCCACAACCGCCAAATCCTACACACACCGCATTG
GACGAACCGGCCGTGGCGGCAAGACCGGCATGGCGCTCTCGTTCGTCGTC
CCGGCAGACCAGTACGGAAAGCACAAACCCACTTCCTTCCCCACCGCCAA
ACATGATGAAGCCGTCCTGGCCAAGATCGTCAAACGTCAATCCAAACATG
GCCACGAAGTCAAGCCCTACCACTTTGAGATGAGTCAAGTCGACGCCTTC
CGCTACCGTATGACCGACGGTCTTCGCGCCATCACCCGACTTGCCGTTCA
GGAAGCCCGTGCTCGTGAGATCCGTCAGGAGCTGGTCAAGAGCGAGAAAC
TGAAGCGCCACTTCGAAGACAACCCCGATGAGCTGCGCCAGCTCCGTCAC
GATGGCGAGTTGCGCTCCGCACGTATCCAACCCCACCTCAAACACATCCC
CGAATACCTGATGCCGTCCAAGGGTCGCAAGGGCATTTCCAGTGAGGACG
TCGGCTTCGTTGGGTTCCGGAAATCCAGCGACAACCGTATCCGCAAGGCT
AGAGATAGGAACCGCGCCAAGGGCAAGGGCCGCAAGCCGTCAGGTGTTAG
AAAGGTTGATCCGTTGAAGACGTTCAATCGGGGTCGGAAATAGGCCGACC
CCTCGTTGAAAGCCACCACTGGCCTCATCCTCGTCCCCACTCGAGAGCTT
GCAGAACAGGTCCAAAAAGTCGTCACCACATTCGCTGCTTTCTGCGGAAA
GGATGTCCGCTCTGTGAACTTGACTCAGAAGGTTTCCGAGGCCGTACAGC
GGACTATGCTCTCTGACTACCCTGATATCGTCATCTCCACCCCCGCTCGT
GTGATTGCCAACCTCGGAAACTCCTCTCTTTCGCTGGATAACCTGACGCA
CCTCGTTATCGACGAAGCCGACTTGGTCCTTTCATACGGATACGATGAAG
ACATCAATGCGCTTTCCAAGGCGATCCCCCGTGGCGTACAGACCTTCCTC
ATGAGTGCTACGCTCACCTCGGAAGTGGATACCTTGAAGGGATTGTTCTG
TCGCAGCCCTGTTGTGCTGAAGTTGGAGGATAAGGAGGAGAAAGGCGCCG
GTGTTAGCCAGTTTGTCGTCAACTCGTGCAAAGACCGGCTCCGGAAAGAC
CGCCGCATATGTCCTCCCTATTCTTCAGACCATTCTTCAGAAGAAAGCTA
TGAAGCGCAAGTTGGATGCTAACGATGTTCCCTCCCCCGAAGTTGCGGAG
ACTAAGGAGACCTCCGATGCGGACGAGGCCGACTTTGAAAGCCTCAACCT
GGATCCGCGACTGCGCCAAGCCTTGATCAAAGAGAAGTTCACCAAGCCTA
CGCCCGTCCAGGCCAAGGCTATTCCTCTGGCGCTCGCAGGCAAAGATATC
CTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.11 |
| Note | SMCOG1122:ATP-dependent RNA helicase |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR001650 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF04851 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | ATP-dependent DNA/RNA helicase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5001829..5003858 - |
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