|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5295467..5298863+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005939-T1 ID=KYF_005939-T1|Name=KYF_005939-T1|organism=Aspergillus niger KYF3|type=mRNA|length=3397bp|location=Sequence derived from alignment at ch4:5295467..5298863+ (Aspergillus niger KYF3) ATGCTCCGCGGCCAGACTCTCCCCTGGAGAGCCGCGCTCCAACAAGCCTC
GCGTCCTTTCATCCCTCGACCTCTACTTGCTCCCTCAAGATACAATGTCA
CCGCCCGATCGATACTAAATGCGTCGCGACTTCACCGCTCCCTCCCGACC
TCCCGCGCTTTCTCCTCGAGCTCCATCCGGCGGAGAGAGAAGCCCCCACC
CGGCGACGAAAAGGACGACCCTGCTCAGAAGGAACAGAAAGACGCAAACG
AAGAGAAGGATGTTGAACGTGCTCCAGACGCCCGACGCAAGGCCGCTGAT
CCCTCTGGCAAGCAGGGATCGTCACACGAACCCGGAGCTCCGACATCGGG
CTTTGCACGGCGGAAGGAGAAGGCGGGCGCGGACAAGGAGCAACGTGGCC
TGGAGGAAGACTCGAAGAAGGATGGTAATGCAGTAGAAGGCAAGGGGAAC
TCCTCTGATACCCCATCCCCTATACCTGTCAATGGTGGCTCCGACTCGAG
GCCTAGTGGCGCGAATAATGGTGGCAACGAGGATGGCGGCAAGAAGGGCA
AGAAGGGCTCCGGCGAGAAGGCCTTGCAGAAGCCATCGGTTCCCGAAGTG
TATCCTCAGGTGATGGCAATTCCGATCGCTAAGCGACCGTTATTCCCGGG
CTTCTACAAAGCAATCACCATCCGAGACCCGAATGTAGCCGCCGCCATAC
AAGACATGATGAAGCGGGGACAACCCTACGTGGGTGCCTTCTTGTTCAAG
GATGAGAATGCAGATGGCGATGTGATTGAGAACCTCGATGATGTCTATGA
TGTTGGTGTCTTTGCTCAGATCACTGCCGCATACCCTCTCCGGGGCGAAG
CGAGTGGGGTCACCGCCGTTCTCTATCCTCACCGTCGTATCAAGGTCTCT
TCGCTGCTTCCGCCTAGCGATGCTGCCAAGGCTGGTACAACTGATGAGAA
GACATCGGAACGCCGTGGAGATGTTGTTGCCAGTTTTGAGGAGGGCACTG
CCGAACTCGCTCCTAAGGACCATTATGAACCCACTTCTTTCCTGCGGAAG
TATCCCGTCAGCTTGGTCAATGTGGAGAACCTTGCGGAGGAACCCTACGA
TAAGAAGAGTGCTATCATCCGCGCTGTCACCAGTGAAATTGTCAACGTTT
GCAAGGAAATCGCGAGCCTGAACCCGTTGTTCCGCGACCAGATTTCTGCG
TTCTACACCGATCAGTTCCCCGGTAATTTGAGCGACGAGCCTGCCAAGTT
GGCGGACTTTGCCGCCGCCGTCTCTGCAGGAGAGCTCAACGAAATGCAAG
AAGTCTTGGAATTGATGAACATTGAGGAGCGACTTCCCAAGGCCTTGGTG
GTGCTGAAGAAGGAGCTTATGAACGCGCAACTCCAATCCAAGATCTCCAA
GGACGTGGAAGCTAAGATTCAGAAGCGACAGCGTGAATACTGGTTGATGG
AACAGATGAAGGGCATCAAACGGGAGTTGGGCATTGAGTCCGATGGCAAA
GATAAGTTGGTCGAGAAGTTCAAGGAGAAGGCAGAGAAGCTTGCTATGCC
GGACGCCGTCAAGAAGGTGTTCGACGAGGAGCTCAACAAGTTGGCCCACC
TGGAGCCTGCTGCCTCTGAGTTTAATGTCACCCGCAACTACCTGGACTGG
CTGACTCAGATCCCTTGGGGACAGAAGAGCGTGGAGAACTTCGGTATTCA
GCATGCGGTGAAGGTCCTGGATGAAGACCATTATGGTCTCAAGGATGTCA
AAGACCGTATTCTGGAGTTCATCGCTGTGGGCAAGCTGCGTGGTACCGTT
GAGGGCAAGATCCTATGTCTGGTCGGACCGCCTGGTGTGGGAAAGACCAG
TATTGGAAAGTCCATCGCACGGGCATTGAACAGACAGTATTACCGCTTCT
CCGTTGGAGGCTTGACCGACGTCGCCGAGATCAAGGGACACCGTAGGACC
TATGTGGGTGCTCTTCCTGGACGCATCATCCAGGCTCTCAAGAAGTGCCA
GACCGAGAACCCCCTTATTCTGATCGACGAAATCGACAAGATTGGCCGCG
GGCACCAGGGAGACCCGTCTTCTGCGCTGCTTGAGTTGCTTGACCCCGAA
CAGAATTCGTCGTTCCTGGACCACTACATGGATGTTCCGGTGGATCTCTC
CAAGGTTCTCTTCGTTTGCACTGCAAACGTGACTGACACGATTCCTCGGC
CACTCTTGGACCGAATGGAGCTCATCGAGTTGTCGGGATATGTTGCCGAT
GAGAAGATGGCCATCGCTCAGCGGTATCTCGCCCCTGCTGCTCGGGAGCT
TACCGGTCTGAAGGAGGTTGATGTTAATTTGACGGAGGAAGCCGTTGAGG
AACTCATCAAGTCCTACTGCCGTGAAAGTGGTGTTCGGAACCTGAAGAAG
CAAATCGAGAAAGTTTATCGTAAGGCGGCATACAAGATCGTTCGGGATCT
CGGCGAAGATGTGCTCGCAGAAGAGAAGGCTCTGACAGATGAGGGTAAGG
CCGTCCAGGAGGAGTCGCAGAAGGAGACTGAATCTCCCGACTCAAAATCT
CCTGTCGACCCGGAGAAGTCCACGACGGAAACGCCTCGCGTTGCACTGAA
GGTTCCGGAAAGTGTGCAGCTCAGTATCGGCAAAGACAGCCTTACTGACT
ATGTTGGACCTCCCATCTTCACAGCTGACCGCCTCTACGACACCTTCCCG
CCTGGCGTGACCATGGGACTTGCCTGGACTAGCATGGGAGGTGCTGCTCT
GTACGTCGAATCGATCCTGGAGAACGCCTTGACGCCTCAGTCCCGACCGG
GTATCGACATCACCGGTAACCTGCAGAACGTGATGAAAGAATCTAGCCAA
ATTGCCTACTCATTTGCCAAGTCGGTCATGGCGAAGCAGTTCCCTGAGAA
TCGATTCTTTGAGAAGGCTAAGCTGCACATGCATTGCCCCGAGGGTGCCG
TACCCAAGGACGGCCCCTCTGCTGGTATTACCATGGCAACATCTCTGCTG
TCCCTGGCTTTGAACCACCCACTCGACCCGACCATCGCCATGACGGGAGA
ACTGACCGTGACCGGAAAAGTTTTGCGCATTGGAGGTTTGCGGGAGAAGA
CCGTTGCTGCTCGCCGTGCTGGTGCTAAGAAGATCGTTTTCCCCGCGGAC
AACATGTCCGACTGGCTGGAGCTGCCTGAGGTGAGTGGTGATTAACTGTT
TGGGAGTGTCTGACAAAGCTAACTTGCAATCACAGAACATCAAGGAGGGC
ATCGAGGGCCATGCAGTAGGCTGGTACTCTGAGGTGTTCGATCTCCTCTT
TACCGACTTGGACAAGGGTGCTGCCAATCACGTCTGGCAGAAACAGCTGG
CTGAGAAGCCTGAGAAGAAATCCAACGAAGTAGAGGAAGACGAGTGA back to topCoding sequence (CDS) from alignment at ch4:5295467..5298863+ >KYF_005939-T1 ID=KYF_005939-T1|Name=KYF_005939-T1|organism=Aspergillus niger KYF3|type=CDS|length=6684bp|location=Sequence derived from alignment at ch4:5295467..5298863+ (Aspergillus niger KYF3) ATGCTCCGCGGCCAGACTCTCCCCTGGAGAGCCGCGCTCCAACAAGCCTC GCGTCCTTTCATCCCTCGACCTCTACTTGCTCCCTCAAGATACAATGTCA CCGCCCGATCGATACTAAATGCGTCGCGACTTCACCGCTCCCTCCCGACC TCCCGCGCTTTCTCCTCGAGCTCCATCCGGCGGAGAGAGAAGCCCCCACC CGGCGACGAAAAGGACGACCCTGCTCAGAAGGAACAGAAAGACGCAAACG AAGAGAAGGATGTTGAACGTGCTCCAGACGCCCGACGCAAGGCCGCTGAT CCCTCTGGCAAGCAGGGATCGTCACACGAACCCGGAGCTCCGACATCGGG CTTTGCACGGCGGAAGGAGAAGGCGGGCGCGGACAAGGAGCAACGTGGCC TGGAGGAAGACTCGAAGAAGGATGGTAATGCAGTAGAAGGCAAGGGGAAC TCCTCTGATACCCCATCCCCTATACCTGTCAATGGTGGCTCCGACTCGAG GCCTAGTGGCGCGAATAATGGTGGCAACGAGGATGGCGGCAAGAAGGGCA AGAAGGGCTCCGGCGAGAAGGCCTTGCAGAAGCCATCGGTTCCCGAAGTG TATCCTCAGGTGATGGCAATTCCGATCGCTAAGCGACCGTTATTCCCGGG CTTCTACAAAGCAATCACCATCCGAGACCCGAATGTAGCCGCCGCCATAC AAGACATGATGAAGCGGGGACAACCCTACGTGGGTGCCTTCTTGTTCAAG GATGAGAATGCAGATGGCGATGTGATTGAGAACCTCGATGATGTCTATGA TGTTGGTGTCTTTGCTCAGATCACTGCCGCATACCCTCTCCGGGGCGAAG CGAGTGGGGTCACCGCCGTTCTCTATCCTCACCGTCGTATCAAGGTCTCT TCGCTGCTTCCGCCTAGCGATGCTGCCAAGGCTGGTACAACTGATGAGAA GACATCGGAACGCCGTGGAGATGTTGTTGCCAGTTTTGAGGAGGGCACTG CCGAACTCGCTCCTAAGGACCATTATGAACCCACTTCTTTCCTGCGGAAG TATCCCGTCAGCTTGGTCAATGTGGAGAACCTTGCGGAGGAACCCTACGA TAAGAAGAGTGCTATCATCCGCGCTGTCACCAGTGAAATTGTCAACGTTT GCAAGGAAATCGCGAGCCTGAACCCGTTGTTCCGCGACCAGATTTCTGCG TTCTACACCGATCAGTTCCCCGGTAATTTGAGCGACGAGCCTGCCAAGTT GGCGGACTTTGCCGCCGCCGTCTCTGCAGGAGAGCTCAACGAAATGCAAG AAGTCTTGGAATTGATGAACATTGAGGAGCGACTTCCCAAGGCCTTGGTG GTGCTGAAGAAGGAGCTTATGAACGCGCAACTCCAATCCAAGATCTCCAA GGACGTGGAAGCTAAGATTCAGAAGCGACAGCGTGAATACTGGTTGATGG AACAGATGAAGGGCATCAAACGGGAGTTGGGCATTGAGTCCGATGGCAAA GATAAGTTGGTCGAGAAGTTCAAGGAGAAGGCAGAGAAGCTTGCTATGCC GGACGCCGTCAAGAAGGTGTTCGACGAGGAGCTCAACAAGTTGGCCCACC TGGAGCCTGCTGCCTCTGAGTTTAATGTCACCCGCAACTACCTGGACTGG CTGACTCAGATCCCTTGGGGACAGAAGAGCGTGGAGAACTTCGGTATTCA GCATGCGGTGAAGGTCCTGGATGAAGACCATTATGGTCTCAAGGATGTCA AAGACCGTATTCTGGAGTTCATCGCTGTGGGCAAGCTGCGTGGTACCGTT GAGGGCAAGATCCTATGTCTGGTCGGACCGCCTGGTGTGGGAAAGACCAG TATTGGAAAGTCCATCGCACGGGCATTGAACAGACAGTATTACCGCTTCT CCGTTGGAGGCTTGACCGACGTCGCCGAGATCAAGGGACACCGTAGGACC TATGTGGGTGCTCTTCCTGGACGCATCATCCAGGCTCTCAAGAAGTGCCA GACCGAGAACCCCCTTATTCTGATCGACGAAATCGACAAGATTGGCCGCG GGCACCAGGGAGACCCGTCTTCTGCGCTGCTTGAGTTGCTTGACCCCGAA CAGAATTCGTCGTTCCTGGACCACTACATGGATGTTCCGGTGGATCTCTC CAAGGTTCTCTTCGTTTGCACTGCAAACGTGACTGACACGATTCCTCGGC CACTCTTGGACCGAATGGAGCTCATCGAGTTGTCGGGATATGTTGCCGAT GAGAAGATGGCCATCGCTCAGCGGTATCTCGCCCCTGCTGCTCGGGAGCT TACCGGTCTGAAGGAGGTTGATGTTAATTTGACGGAGGAAGCCGTTGAGG AACTCATCAAGTCCTACTGCCGTGAAAGTGGTGTTCGGAACCTGAAGAAG CAAATCGAGAAAGTTTATCGTAAGGCGGCATACAAGATCGTTCGGGATCT CGGCGAAGATGTGCTCGCAGAAGAGAAGGCTCTGACAGATGAGGGTAAGG CCGTCCAGGAGGAGTCGCAGAAGGAGACTGAATCTCCCGACTCAAAATCT CCTGTCGACCCGGAGAAGTCCACGACGGAAACGCCTCGCGTTGCACTGAA GGTTCCGGAAAGTGTGCAGCTCAGTATCGGCAAAGACAGCCTTACTGACT ATGTTGGACCTCCCATCTTCACAGCTGACCGCCTCTACGACACCTTCCCG CCTGGCGTGACCATGGGACTTGCCTGGACTAGCATGGGAGGTGCTGCTCT GTACGTCGAATCGATCCTGGAGAACGCCTTGACGCCTCAGTCCCGACCGG GTATCGACATCACCGGTAACCTGCAGAACGTGATGAAAGAATCTAGCCAA ATTGCCTACTCATTTGCCAAGTCGGTCATGGCGAAGCAGTTCCCTGAGAA TCGATTCTTTGAGAAGGCTAAGCTGCACATGCATTGCCCCGAGGGTGCCG TACCCAAGGACGGCCCCTCTGCTGGTATTACCATGGCAACATCTCTGCTG TCCCTGGCTTTGAACCACCCACTCGACCCGACCATCGCCATGACGGGAGA ACTGACCGTGACCGGAAAAGTTTTGCGCATTGGAGGTTTGCGGGAGAAGA CCGTTGCTGCTCGCCGTGCTGGTGCTAAGAAGATCGTTTTCCCCGCGGAC AACATGTCCGACTGGCTGGAGCTGCCTGAGAACATCAAGGAGGGCATCGA GGGCCATGCAGTAGGCTGGTACTCTGAGGTGTTCGATCTCCTCTTTACCG ACTTGGACAAGGGTGCTGCCAATCACGTCTGGCAGAAACAGCTGGCTGAG AAGCCTGAGAAGAAATCCAACGAAGTAGAGGAAGACGAGTGAATGCTCCG CGGCCAGACTCTCCCCTGGAGAGCCGCGCTCCAACAAGCCTCGCGTCCTT TCATCCCTCGACCTCTACTTGCTCCCTCAAGATACAATGTCACCGCCCGA TCGATACTAAATGCGTCGCGACTTCACCGCTCCCTCCCGACCTCCCGCGC TTTCTCCTCGAGCTCCATCCGGCGGAGAGAGAAGCCCCCACCCGGCGACG AAAAGGACGACCCTGCTCAGAAGGAACAGAAAGACGCAAACGAAGAGAAG GATGTTGAACGTGCTCCAGACGCCCGACGCAAGGCCGCTGATCCCTCTGG CAAGCAGGGATCGTCACACGAACCCGGAGCTCCGACATCGGGCTTTGCAC GGCGGAAGGAGAAGGCGGGCGCGGACAAGGAGCAACGTGGCCTGGAGGAA GACTCGAAGAAGGATGGTAATGCAGTAGAAGGCAAGGGGAACTCCTCTGA TACCCCATCCCCTATACCTGTCAATGGTGGCTCCGACTCGAGGCCTAGTG GCGCGAATAATGGTGGCAACGAGGATGGCGGCAAGAAGGGCAAGAAGGGC TCCGGCGAGAAGGCCTTGCAGAAGCCATCGGTTCCCGAAGTGTATCCTCA GGTGATGGCAATTCCGATCGCTAAGCGACCGTTATTCCCGGGCTTCTACA AAGCAATCACCATCCGAGACCCGAATGTAGCCGCCGCCATACAAGACATG ATGAAGCGGGGACAACCCTACGTGGGTGCCTTCTTGTTCAAGGATGAGAA TGCAGATGGCGATGTGATTGAGAACCTCGATGATGTCTATGATGTTGGTG TCTTTGCTCAGATCACTGCCGCATACCCTCTCCGGGGCGAAGCGAGTGGG GTCACCGCCGTTCTCTATCCTCACCGTCGTATCAAGGTCTCTTCGCTGCT TCCGCCTAGCGATGCTGCCAAGGCTGGTACAACTGATGAGAAGACATCGG AACGCCGTGGAGATGTTGTTGCCAGTTTTGAGGAGGGCACTGCCGAACTC GCTCCTAAGGACCATTATGAACCCACTTCTTTCCTGCGGAAGTATCCCGT CAGCTTGGTCAATGTGGAGAACCTTGCGGAGGAACCCTACGATAAGAAGA GTGCTATCATCCGCGCTGTCACCAGTGAAATTGTCAACGTTTGCAAGGAA ATCGCGAGCCTGAACCCGTTGTTCCGCGACCAGATTTCTGCGTTCTACAC CGATCAGTTCCCCGGTAATTTGAGCGACGAGCCTGCCAAGTTGGCGGACT TTGCCGCCGCCGTCTCTGCAGGAGAGCTCAACGAAATGCAAGAAGTCTTG GAATTGATGAACATTGAGGAGCGACTTCCCAAGGCCTTGGTGGTGCTGAA GAAGGAGCTTATGAACGCGCAACTCCAATCCAAGATCTCCAAGGACGTGG AAGCTAAGATTCAGAAGCGACAGCGTGAATACTGGTTGATGGAACAGATG AAGGGCATCAAACGGGAGTTGGGCATTGAGTCCGATGGCAAAGATAAGTT GGTCGAGAAGTTCAAGGAGAAGGCAGAGAAGCTTGCTATGCCGGACGCCG TCAAGAAGGTGTTCGACGAGGAGCTCAACAAGTTGGCCCACCTGGAGCCT GCTGCCTCTGAGTTTAATGTCACCCGCAACTACCTGGACTGGCTGACTCA GATCCCTTGGGGACAGAAGAGCGTGGAGAACTTCGGTATTCAGCATGCGG TGAAGGTCCTGGATGAAGACCATTATGGTCTCAAGGATGTCAAAGACCGT ATTCTGGAGTTCATCGCTGTGGGCAAGCTGCGTGGTACCGTTGAGGGCAA GATCCTATGTCTGGTCGGACCGCCTGGTGTGGGAAAGACCAGTATTGGAA AGTCCATCGCACGGGCATTGAACAGACAGTATTACCGCTTCTCCGTTGGA GGCTTGACCGACGTCGCCGAGATCAAGGGACACCGTAGGACCTATGTGGG TGCTCTTCCTGGACGCATCATCCAGGCTCTCAAGAAGTGCCAGACCGAGA ACCCCCTTATTCTGATCGACGAAATCGACAAGATTGGCCGCGGGCACCAG GGAGACCCGTCTTCTGCGCTGCTTGAGTTGCTTGACCCCGAACAGAATTC GTCGTTCCTGGACCACTACATGGATGTTCCGGTGGATCTCTCCAAGGTTC TCTTCGTTTGCACTGCAAACGTGACTGACACGATTCCTCGGCCACTCTTG GACCGAATGGAGCTCATCGAGTTGTCGGGATATGTTGCCGATGAGAAGAT GGCCATCGCTCAGCGGTATCTCGCCCCTGCTGCTCGGGAGCTTACCGGTC TGAAGGAGGTTGATGTTAATTTGACGGAGGAAGCCGTTGAGGAACTCATC AAGTCCTACTGCCGTGAAAGTGGTGTTCGGAACCTGAAGAAGCAAATCGA GAAAGTTTATCGTAAGGCGGCATACAAGATCGTTCGGGATCTCGGCGAAG ATGTGCTCGCAGAAGAGAAGGCTCTGACAGATGAGGGTAAGGCCGTCCAG GAGGAGTCGCAGAAGGAGACTGAATCTCCCGACTCAAAATCTCCTGTCGA CCCGGAGAAGTCCACGACGGAAACGCCTCGCGTTGCACTGAAGGTTCCGG AAAGTGTGCAGCTCAGTATCGGCAAAGACAGCCTTACTGACTATGTTGGA CCTCCCATCTTCACAGCTGACCGCCTCTACGACACCTTCCCGCCTGGCGT GACCATGGGACTTGCCTGGACTAGCATGGGAGGTGCTGCTCTGTACGTCG AATCGATCCTGGAGAACGCCTTGACGCCTCAGTCCCGACCGGGTATCGAC ATCACCGGTAACCTGCAGAACGTGATGAAAGAATCTAGCCAAATTGCCTA CTCATTTGCCAAGTCGGTCATGGCGAAGCAGTTCCCTGAGAATCGATTCT TTGAGAAGGCTAAGCTGCACATGCATTGCCCCGAGGGTGCCGTACCCAAG GACGGCCCCTCTGCTGGTATTACCATGGCAACATCTCTGCTGTCCCTGGC TTTGAACCACCCACTCGACCCGACCATCGCCATGACGGGAGAACTGACCG TGACCGGAAAAGTTTTGCGCATTGGAGGTTTGCGGGAGAAGACCGTTGCT GCTCGCCGTGCTGGTGCTAAGAAGATCGTTTTCCCCGCGGACAACATGTC CGACTGGCTGGAGCTGCCTGAGAACATCAAGGAGGGCATCGAGGGCCATG CAGTAGGCTGGTACTCTGAGGTGTTCGATCTCCTCTTTACCGACTTGGAC AAGGGTGCTGCCAATCACGTCTGGCAGAAACAGCTGGCTGAGAAGCCTGA GAAGAAATCCAACGAAGTAGAGGAAGACGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0005524 | ATP binding |
GO:0004176 | ATP-dependent peptidase activity |
GO:0004252 | serine-type endopeptidase activity |
Vocabulary: Biological Process
Term | Definition |
GO:0006515 | protein quality control for misfolded or incompletely synthesized proteins |
GO:0006508 | proteolysis |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | BUSCO:EOG09260RRN |
Note | MEROPS:MER0000496 |
DBxref | InterPro:IPR027417 |
DBxref | InterPro:IPR015947 |
DBxref | InterPro:IPR020568 |
DBxref | InterPro:IPR027503 |
DBxref | InterPro:IPR008268 |
DBxref | InterPro:IPR004815 |
DBxref | InterPro:IPR003959 |
DBxref | InterPro:IPR008269 |
DBxref | InterPro:IPR014721 |
DBxref | InterPro:IPR003111 |
DBxref | InterPro:IPR003593 |
DBxref | PFAM:PF02190 |
DBxref | PFAM:PF05362 |
DBxref | PFAM:PF07728 |
DBxref | PFAM:PF07724 |
DBxref | PFAM:PF00004 |
Product | ATP-dependent Lon protease pim1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch4 | supercontig | ch4:5295467..5298863 + |
|