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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5332543..5334390- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005956-T1 ID=KYF_005956-T1|Name=KYF_005956-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1848bp|location=Sequence derived from alignment at ch4:5332543..5334390- (Aspergillus niger KYF3)
ATGGGCATGGCAGGTACTGTCGCCAATGGCGGCGCTCCTCGGCCCTCGAA
GATCCCTTATTGGCGCCTTGTCTTCGACCAAAAAGTCGTCACCCCGGAGA
TCATCGATTTCAACTATGAAGGGTTAGGGACGGAAGAATCGCCCTATGTC
GTCACCTGGCTTCCTAACGATCCTCGAAACCCCATGGCTTTTGGCAGTCT
TTCAAAATGGCTATATACCATTCTAGTTTCCTTCGTGACCCTTACTGTCG
CCTTGGTATCATCAGCATACTCAGGAAGTATAAGTCAGGTTGTTATAGAG
TTTCAGTGTGAGGAAGAGGTTGCAATCCTCGGTATCTCTCTATTCGTTTT
GGGCTTCGCCTTTGGCCCCCTACTATGGGCTCCAATGAGCGAGGTGTTTG
GACGCCGTAATGTTTTCTCGGTAACATTTGCGCTTCTCACAGCCTTCAAT
GCAGGGGCTGCAGGTTCCAAGAACATTCAAACGCTGGTCATCCTTCGCTT
CCTGGCCGGATTCTTCGGATCGTCACCTTTTGGCAATGCGGGCGGAACGA
TTGCAGATCTGTTCCCCGCTGCCAAACGTGGTATTGCTATCAGTCTCTTC
GCCGCGGCACCTCTTTGTGGACCTACTATTGGCCCTGTCATTGGTGGCTT
TCTCGGTGCCGGGGCAGGCTGGCGTTGGGTGGAAGGATTTCTGGCAGCCT
TTTCCGGCGTGATGTGGTTATGCCTTATCTTCTTCCTGCCGGAGACATAT
GCTCCAGTTCTCTTGCGCCGACGGGCAGAGAAGCTGTCTGAACTGAGTGG
CAAGGTCTACCGCAGTAAACTGGATATCGAGAGAGGCAAGGTGGCTTTAG
GCCAAGCATTGAAGACCGCCCTGTCACGACCTTGGCTCATGCTCTTCAGA
GAGCCCATTGTGCTGCTCCTCTGTATCTACATGTCCATCATCTATGGAAC
GCTCTACATGCTGTTTGCAGCTTATCCTATCGTCTTCCAGCAGGCACGCG
GCTGGAGTGAGGGTATTGGAGGCTTGGCTTTCTTGGGTATCCTAGTCGGG
ATGGTGATCGCAGTCTCTCTCACTATTCCCGACAATCTGAATTATGCGAA
GAAGTGCCAACAAGCCAACGGCCGTTTGCCTCCCGAGGTTCGTCTGCCCC
CAAGTATTCTTGGAGGAATCGCGTTACCTATCGGTCTTTTCTGGTTTGCC
TGGACCAACTATCCGTCCATTCACTGGATGGCATCTGTGGCCGCGGGGGC
CCCGTTCGGATTCGGCTTGGTATTGGTGTTCCTGAGTGTTTTCAACTACC
TCATTGACGCATACACGATCTATGCTGCATCGGTGCTGGCCGCGAACTCG
GCTCTCCGATCTTTGTTCGGATTTGCATTCCCGTTGTTCACGACCTACAT
GTACGAAAACCTCGGTATTCACTGGGCTTCCTCAATCCCCGCGTTCTTGT
CGCTTGCATGCATTCCTTTCCCTATCGTGTTCTACCTGTATGGTGCTCGC
ATCCGCAAGCGCTGCCTCTATGCTGCCCAGGCAGAGGCATTCATGCAGAG
ACTTGCTGCCGCGGCGCAGCAGAGCCAAGCCCCTCCGCCGGCGAAGTCCG
ATGTGGAGAAAGGAGACACTGCCGCTGTGGCTGACAACGATAACAGTGAT
GACAGTGATAGCGACAGCCTTTCCAGTGTGCCTTCTAGGGGTGCAATCGA
AAGGCGGGCGTCGCGTGCTTCCAAGAAGTCCGCTCGCTCTCTTGCTCGTA
CAGTCACATATGAGGAGAATCCGTATGATATTGATCGAGTCAATACTTGC
AACTCTACTATCAGCGGCCGCCCTAGGAAGAATTCGACTAAGGCATGA back to topCoding sequence (CDS) from alignment at ch4:5332543..5334390- >KYF_005956-T1 ID=KYF_005956-T1|Name=KYF_005956-T1|organism=Aspergillus niger KYF3|type=CDS|length=1848bp|location=Sequence derived from alignment at ch4:5332543..5334390- (Aspergillus niger KYF3)
ATGGGCATGGCAGGTACTGTCGCCAATGGCGGCGCTCCTCGGCCCTCGAA
GATCCCTTATTGGCGCCTTGTCTTCGACCAAAAAGTCGTCACCCCGGAGA
TCATCGATTTCAACTATGAAGGGTTAGGGACGGAAGAATCGCCCTATGTC
GTCACCTGGCTTCCTAACGATCCTCGAAACCCCATGGCTTTTGGCAGTCT
TTCAAAATGGCTATATACCATTCTAGTTTCCTTCGTGACCCTTACTGTCG
CCTTGGTATCATCAGCATACTCAGGAAGTATAAGTCAGGTTGTTATAGAG
TTTCAGTGTGAGGAAGAGGTTGCAATCCTCGGTATCTCTCTATTCGTTTT
GGGCTTCGCCTTTGGCCCCCTACTATGGGCTCCAATGAGCGAGGTGTTTG
GACGCCGTAATGTTTTCTCGGTAACATTTGCGCTTCTCACAGCCTTCAAT
GCAGGGGCTGCAGGTTCCAAGAACATTCAAACGCTGGTCATCCTTCGCTT
CCTGGCCGGATTCTTCGGATCGTCACCTTTTGGCAATGCGGGCGGAACGA
TTGCAGATCTGTTCCCCGCTGCCAAACGTGGTATTGCTATCAGTCTCTTC
GCCGCGGCACCTCTTTGTGGACCTACTATTGGCCCTGTCATTGGTGGCTT
TCTCGGTGCCGGGGCAGGCTGGCGTTGGGTGGAAGGATTTCTGGCAGCCT
TTTCCGGCGTGATGTGGTTATGCCTTATCTTCTTCCTGCCGGAGACATAT
GCTCCAGTTCTCTTGCGCCGACGGGCAGAGAAGCTGTCTGAACTGAGTGG
CAAGGTCTACCGCAGTAAACTGGATATCGAGAGAGGCAAGGTGGCTTTAG
GCCAAGCATTGAAGACCGCCCTGTCACGACCTTGGCTCATGCTCTTCAGA
GAGCCCATTGTGCTGCTCCTCTGTATCTACATGTCCATCATCTATGGAAC
GCTCTACATGCTGTTTGCAGCTTATCCTATCGTCTTCCAGCAGGCACGCG
GCTGGAGTGAGGGTATTGGAGGCTTGGCTTTCTTGGGTATCCTAGTCGGG
ATGGTGATCGCAGTCTCTCTCACTATTCCCGACAATCTGAATTATGCGAA
GAAGTGCCAACAAGCCAACGGCCGTTTGCCTCCCGAGGTTCGTCTGCCCC
CAAGTATTCTTGGAGGAATCGCGTTACCTATCGGTCTTTTCTGGTTTGCC
TGGACCAACTATCCGTCCATTCACTGGATGGCATCTGTGGCCGCGGGGGC
CCCGTTCGGATTCGGCTTGGTATTGGTGTTCCTGAGTGTTTTCAACTACC
TCATTGACGCATACACGATCTATGCTGCATCGGTGCTGGCCGCGAACTCG
GCTCTCCGATCTTTGTTCGGATTTGCATTCCCGTTGTTCACGACCTACAT
GTACGAAAACCTCGGTATTCACTGGGCTTCCTCAATCCCCGCGTTCTTGT
CGCTTGCATGCATTCCTTTCCCTATCGTGTTCTACCTGTATGGTGCTCGC
ATCCGCAAGCGCTGCCTCTATGCTGCCCAGGCAGAGGCATTCATGCAGAG
ACTTGCTGCCGCGGCGCAGCAGAGCCAAGCCCCTCCGCCGGCGAAGTCCG
ATGTGGAGAAAGGAGACACTGCCGCTGTGGCTGACAACGATAACAGTGAT
GACAGTGATAGCGACAGCCTTTCCAGTGTGCCTTCTAGGGGTGCAATCGA
AAGGCGGGCGTCGCGTGCTTCCAAGAAGTCCGCTCGCTCTCTTGCTCGTA
CAGTCACATATGAGGAGAATCCGTATGATATTGATCGAGTCAATACTTGC
AACTCTACTATCAGCGGCCGCCCTAGGAAGAATTCGACTAAGGCATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5332543..5334390 - |
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