|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5337950..5339300+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005958-T1 ID=KYF_005958-T1|Name=KYF_005958-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1351bp|location=Sequence derived from alignment at ch4:5337950..5339300+ (Aspergillus niger KYF3)
ATGGTTGAACACGTTCTGGACGATATCTCCCATCGGAGGTTCAACCCCCT
TCGAGGATCCTACATTCTGGTCTCCCCACATCGGACCAAGCGCCCCTGGC
AGTAAGTTGGCCTGCTTCTGTCCAACAGAAATGGACATGGACCCATTCAG
AGAGGAGCAGCTGAGCTAAATGCTGCGATCAGAGGACAGCAGGAGAGCCC
CTCTAAAACTACTTTACCAACCTACGACCCCGCTTGCTATCTTTGCCCCG
GAAACAAGCGCGCGCAAGGCGATACTAACCCTAAGTATGAGAAAACCTTC
GTCTTCGTAAACGACTACAGTGCGGTCAAGGAAGAACAAGCGCCGTATAG
CCCTGAAGGTGGCGAGGGTATGTTTGGCTTGTAATCTCATGGCCCGGCGA
ATGCGACGCTAACAATTCGAGGACCAGACCTTGAATCATTCTTCCTCAAG
GCAGAGCCTGTCACCGGCAAATGCTATGTACTTACCTTCTCTGCGGCCCA
CAACCTCACCTTGGCCGACCTTTCGCCTGCTGAGATTGTGCCTGTCATTG
ACGCTTGGACTGAGATTTACACTGCCCATTTGTCCCCCAAGTCGCCCTTG
GCTGCTGTAGCTCCAGCGACCACCCTGCCTCCAAATTCCCCAACTGCTAG
CTTGACCAAGCCCAAGGAGCAGTATCGCTACATGCAGATCTTTGAGAACA
AGGGTGCTGCCATGGGGTGCTCGAACCCTCACCCTCACGGTCAGGTCTGG
ACTACCAGCTCTTTGCCCGAAGAACCGGCTATGGAACTCGAGCAGCTGAA
GAAATACCGCCGGGAAAATGGTGGCAAGCATATGTTGGAAGCCTATGCTG
CTCTGGAAAGCCGGAAGCAGGAGCGCGTGGTGTTTGAGAACGATGCCTTC
CTTGTCGTCTGCCCCTGGTGGGCTGTCTGGCCTTTTGAGACCATGATTGT
CAGCAAGACCCACAAGCGTGCGCTGGTCGACTTAGATAGCAGCGAGAAGG
TGCAGCTAGCGGAAGCCATTGCCGAAGTCACCAGACGTTACGACAACCTC
TTCGAAACGCACTTCCCGTACAGCATGGGTATCCACCAGGCACCACTTGA
CGGAACCGAGGAGGAAATCGAGTCGTCATATCTTCACCTTCACTTCTACC
CCCCGCTATTGCGCAGCGCCACTGTGCGCAAATTCTTGGTCGGGTGAGTG
GTTATAAACCATCACGTTACGGTAAAGATTGCTGATGAGTCATAGGTATG
AAATGATGGGCGAGCCCCAGCGTGACATTACACCCGAGCAAGCGGCTGCG
AGGTTGCGAGGCTGCGGGGGAGAGCTCTATAGGAAGAAGATGGACAACTA
A back to topCoding sequence (CDS) from alignment at ch4:5337950..5339300+ >KYF_005958-T1 ID=KYF_005958-T1|Name=KYF_005958-T1|organism=Aspergillus niger KYF3|type=CDS|length=4632bp|location=Sequence derived from alignment at ch4:5337950..5339300+ (Aspergillus niger KYF3)
ATGGTTGAACACGTTCTGGACGATATCTCCCATCGGAGGTTCAACCCCCT
TCGAGGATCCTACATTCTGGTCTCCCCACATCGGACCAAGCGCCCCTGGC
AAGGACAGCAGGAGAGCCCCTCTAAAACTACTTTACCAACCTACGACCCC
GCTTGCTATCTTTGCCCCGGAAACAAGCGCGCGCAAGGCGATACTAACCC
TAAGTATGAGAAAACCTTCGTCTTCGTAAACGACTACAGTGCGGTCAAGG
AAGAACAAGCGCCGTATAGCCCTGAAGGTGGCGAGGACCTTGAATCATTC
TTCCTCAAGGCAGAGCCTGTCACCGGCAAATGCTATGTACTTACCTTCTC
TGCGGCCCACAACCTCACCTTGGCCGACCTTTCGCCTGCTGAGATTGTGC
CTGTCATTGACGCTTGGACTGAGATTTACACTGCCCATTTGTCCCCCAAG
TCGCCCTTGGCTGCTGTAGCTCCAGCGACCACCCTGCCTCCAAATTCCCC
AACTGCTAGCTTGACCAAGCCCAAGGAGCAGTATCGCTACATGCAGATCT
TTGAGAACAAGGGTGCTGCCATGGGGTGCTCGAACCCTCACCCTCACGGT
CAGGTCTGGACTACCAGCTCTTTGCCCGAAGAACCGGCTATGGAACTCGA
GCAGCTGAAGAAATACCGCCGGGAAAATGGTGGCAAGCATATGTTGGAAG
CCTATGCTGCTCTGGAAAGCCGGAAGCAGGAGCGCGTGGTGTTTGAGAAC
GATGCCTTCCTTGTCGTCTGCCCCTGGTGGGCTGTCTGGCCTTTTGAGAC
CATGATTGTCAGCAAGACCCACAAGCGTGCGCTGGTCGACTTAGATAGCA
GCGAGAAGGTGCAGCTAGCGGAAGCCATTGCCGAAGTCACCAGACGTTAC
GACAACCTCTTCGAAACGCACTTCCCGTACAGCATGGGTATCCACCAGGC
ACCACTTGACGGAACCGAGGAGGAAATCGAGTCGTCATATCTTCACCTTC
ACTTCTACCCCCCGCTATTGCGCAGCGCCACTGTGCGCAAATTCTTGGTC
GGGTATGAAATGATGGGCGAGCCCCAGCGTGACATTACACCCGAGCAAGC
GGCTGCGAGGTTGCGAGGCTGCGGGGGAGAGCTCTATAGGAAGAAGATGG
ACAACTAAATGGTTGAACACGTTCTGGACGATATCTCCCATCGGAGGTTC
AACCCCCTTCGAGGATCCTACATTCTGGTCTCCCCACATCGGACCAAGCG
CCCCTGGCAAGGACAGCAGGAGAGCCCCTCTAAAACTACTTTACCAACCT
ACGACCCCGCTTGCTATCTTTGCCCCGGAAACAAGCGCGCGCAAGGCGAT
ACTAACCCTAAGTATGAGAAAACCTTCGTCTTCGTAAACGACTACAGTGC
GGTCAAGGAAGAACAAGCGCCGTATAGCCCTGAAGGTGGCGAGGACCTTG
AATCATTCTTCCTCAAGGCAGAGCCTGTCACCGGCAAATGCTATGTACTT
ACCTTCTCTGCGGCCCACAACCTCACCTTGGCCGACCTTTCGCCTGCTGA
GATTGTGCCTGTCATTGACGCTTGGACTGAGATTTACACTGCCCATTTGT
CCCCCAAGTCGCCCTTGGCTGCTGTAGCTCCAGCGACCACCCTGCCTCCA
AATTCCCCAACTGCTAGCTTGACCAAGCCCAAGGAGCAGTATCGCTACAT
GCAGATCTTTGAGAACAAGGGTGCTGCCATGGGGTGCTCGAACCCTCACC
CTCACGGTCAGGTCTGGACTACCAGCTCTTTGCCCGAAGAACCGGCTATG
GAACTCGAGCAGCTGAAGAAATACCGCCGGGAAAATGGTGGCAAGCATAT
GTTGGAAGCCTATGCTGCTCTGGAAAGCCGGAAGCAGGAGCGCGTGGTGT
TTGAGAACGATGCCTTCCTTGTCGTCTGCCCCTGGTGGGCTGTCTGGCCT
TTTGAGACCATGATTGTCAGCAAGACCCACAAGCGTGCGCTGGTCGACTT
AGATAGCAGCGAGAAGGTGCAGCTAGCGGAAGCCATTGCCGAAGTCACCA
GACGTTACGACAACCTCTTCGAAACGCACTTCCCGTACAGCATGGGTATC
CACCAGGCACCACTTGACGGAACCGAGGAGGAAATCGAGTCGTCATATCT
TCACCTTCACTTCTACCCCCCGCTATTGCGCAGCGCCACTGTGCGCAAAT
TCTTGGTCGGGTATGAAATGATGGGCGAGCCCCAGCGTGACATTACACCC
GAGCAAGCGGCTGCGAGGTTGCGAGGCTGCGGGGGAGAGCTCTATAGGAA
GAAGATGGACAACTAAATGGTTGAACACGTTCTGGACGATATCTCCCATC
GGAGGTTCAACCCCCTTCGAGGATCCTACATTCTGGTCTCCCCACATCGG
ACCAAGCGCCCCTGGCAAGGACAGCAGGAGAGCCCCTCTAAAACTACTTT
ACCAACCTACGACCCCGCTTGCTATCTTTGCCCCGGAAACAAGCGCGCGC
AAGGCGATACTAACCCTAAGTATGAGAAAACCTTCGTCTTCGTAAACGAC
TACAGTGCGGTCAAGGAAGAACAAGCGCCGTATAGCCCTGAAGGTGGCGA
GGACCTTGAATCATTCTTCCTCAAGGCAGAGCCTGTCACCGGCAAATGCT
ATGTACTTACCTTCTCTGCGGCCCACAACCTCACCTTGGCCGACCTTTCG
CCTGCTGAGATTGTGCCTGTCATTGACGCTTGGACTGAGATTTACACTGC
CCATTTGTCCCCCAAGTCGCCCTTGGCTGCTGTAGCTCCAGCGACCACCC
TGCCTCCAAATTCCCCAACTGCTAGCTTGACCAAGCCCAAGGAGCAGTAT
CGCTACATGCAGATCTTTGAGAACAAGGGTGCTGCCATGGGGTGCTCGAA
CCCTCACCCTCACGGTCAGGTCTGGACTACCAGCTCTTTGCCCGAAGAAC
CGGCTATGGAACTCGAGCAGCTGAAGAAATACCGCCGGGAAAATGGTGGC
AAGCATATGTTGGAAGCCTATGCTGCTCTGGAAAGCCGGAAGCAGGAGCG
CGTGGTGTTTGAGAACGATGCCTTCCTTGTCGTCTGCCCCTGGTGGGCTG
TCTGGCCTTTTGAGACCATGATTGTCAGCAAGACCCACAAGCGTGCGCTG
GTCGACTTAGATAGCAGCGAGAAGGTGCAGCTAGCGGAAGCCATTGCCGA
AGTCACCAGACGTTACGACAACCTCTTCGAAACGCACTTCCCGTACAGCA
TGGGTATCCACCAGGCACCACTTGACGGAACCGAGGAGGAAATCGAGTCG
TCATATCTTCACCTTCACTTCTACCCCCCGCTATTGCGCAGCGCCACTGT
GCGCAAATTCTTGGTCGGGTATGAAATGATGGGCGAGCCCCAGCGTGACA
TTACACCCGAGCAAGCGGCTGCGAGGTTGCGAGGCTGCGGGGGAGAGCTC
TATAGGAAGAAGATGGACAACTAAATGGTTGAACACGTTCTGGACGATAT
CTCCCATCGGAGGTTCAACCCCCTTCGAGGATCCTACATTCTGGTCTCCC
CACATCGGACCAAGCGCCCCTGGCAAGGACAGCAGGAGAGCCCCTCTAAA
ACTACTTTACCAACCTACGACCCCGCTTGCTATCTTTGCCCCGGAAACAA
GCGCGCGCAAGGCGATACTAACCCTAAGTATGAGAAAACCTTCGTCTTCG
TAAACGACTACAGTGCGGTCAAGGAAGAACAAGCGCCGTATAGCCCTGAA
GGTGGCGAGGACCTTGAATCATTCTTCCTCAAGGCAGAGCCTGTCACCGG
CAAATGCTATGTACTTACCTTCTCTGCGGCCCACAACCTCACCTTGGCCG
ACCTTTCGCCTGCTGAGATTGTGCCTGTCATTGACGCTTGGACTGAGATT
TACACTGCCCATTTGTCCCCCAAGTCGCCCTTGGCTGCTGTAGCTCCAGC
GACCACCCTGCCTCCAAATTCCCCAACTGCTAGCTTGACCAAGCCCAAGG
AGCAGTATCGCTACATGCAGATCTTTGAGAACAAGGGTGCTGCCATGGGG
TGCTCGAACCCTCACCCTCACGGTCAGGTCTGGACTACCAGCTCTTTGCC
CGAAGAACCGGCTATGGAACTCGAGCAGCTGAAGAAATACCGCCGGGAAA
ATGGTGGCAAGCATATGTTGGAAGCCTATGCTGCTCTGGAAAGCCGGAAG
CAGGAGCGCGTGGTGTTTGAGAACGATGCCTTCCTTGTCGTCTGCCCCTG
GTGGGCTGTCTGGCCTTTTGAGACCATGATTGTCAGCAAGACCCACAAGC
GTGCGCTGGTCGACTTAGATAGCAGCGAGAAGGTGCAGCTAGCGGAAGCC
ATTGCCGAAGTCACCAGACGTTACGACAACCTCTTCGAAACGCACTTCCC
GTACAGCATGGGTATCCACCAGGCACCACTTGACGGAACCGAGGAGGAAA
TCGAGTCGTCATATCTTCACCTTCACTTCTACCCCCCGCTATTGCGCAGC
GCCACTGTGCGCAAATTCTTGGTCGGGTATGAAATGATGGGCGAGCCCCA
GCGTGACATTACACCCGAGCAAGCGGCTGCGAGGTTGCGAGGCTGCGGGG
GAGAGCTCTATAGGAAGAAGATGGACAACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0008108 | UDP-glucose:hexose-1-phosphate uridylyltransferase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0033499 | galactose catabolic process via UDP-galactose |
| GO:0006012 | galactose metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019779 |
| DBxref | InterPro:IPR001937 |
| DBxref | InterPro:IPR036265 |
| DBxref | InterPro:IPR005849 |
| DBxref | InterPro:IPR005850 |
| DBxref | PFAM:PF02744 |
| DBxref | PFAM:PF01087 |
| Product | galactose-1-phosphate uridyl transferase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5337950..5339300 + |
|
