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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5530726..5531521- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_006020-T1 ID=KYF_006020-T1|Name=KYF_006020-T1|organism=Aspergillus niger KYF3|type=mRNA|length=796bp|location=Sequence derived from alignment at ch4:5530726..5531521- (Aspergillus niger KYF3)
ATGGACGTTCCTGAGCCTGAGCAGACGCCTTTCACGGCCGTGACGGCGCA
AACCTCGAAGCTGGCTAGGGTACGTATCTGTACTTCCTTTTGGACCCTTT
TTCACAGTGTCTGTCGCAATCCTGCAACCAGCGCAGACGACGTGCCCATC
CGCTACCCCAGCAGACAACACCAACCCACGGACCATGACATGACATGATA
AGCTAACTAATACCTCGCACAGCAATACCAAACCTACCTCGACGCCTCCA
CCCCATTCACAGCCTACCGCTGGACCGGCACCGTCGTCCTGCTCCTCGTC
TTCTTCCTGAGAATCGTCCTCGCCCAGGGATGGTACATCGTGGCCTACAC
CCTCGGCATCTACCTGCTCAACCTCTTCCTCCTCTTCCTGCAACCCAAGT
TCGACCCCTCCCTGACGCAGGATGAGGGTCTGGAAGACGGCGACGCCGCC
GCTCCCAGCCTGCCCATGAAGCAAGACGACGAATTCCGTCCTTTCATCCG
CCGTCTCCCCGAGTTCAAGTTCTGGCACTCGGCCACTCGCGCCATTCTTA
TCGGCTTCGTTTGCTCGTGGTTCGCCGTCTTCGATATCCCGGTGTTCTGG
CCTGTCTTGGTGGTCTACTGGATTATTCTCTTTGTGTTGACCAGTACGTA
TACCAGTTCTGCTTATCTGTGGTGGGAGGCGAAACCGGCAGAAGGCTAAC
CCAAATTCACTACTAGTGCGCCGCCAGATCCAGCACATGATCAAGTACCG
CTACGTGCCGTTCTCGTTCGGTAAGACGCGGTACGGCCGGTCATAA back to topCoding sequence (CDS) from alignment at ch4:5530726..5531521- >KYF_006020-T1 ID=KYF_006020-T1|Name=KYF_006020-T1|organism=Aspergillus niger KYF3|type=CDS|length=1710bp|location=Sequence derived from alignment at ch4:5530726..5531521- (Aspergillus niger KYF3)
TGCGCCGCCAGATCCAGCACATGATCAAGTACCGCTACGTGCCGTTCTCG
TTCGGTAAGACGCGGTACGGCCGGTCATAACAATACCAAACCTACCTCGA
CGCCTCCACCCCATTCACAGCCTACCGCTGGACCGGCACCGTCGTCCTGC
TCCTCGTCTTCTTCCTGAGAATCGTCCTCGCCCAGGGATGGTACATCGTG
GCCTACACCCTCGGCATCTACCTGCTCAACCTCTTCCTCCTCTTCCTGCA
ACCCAAGTTCGACCCCTCCCTGACGCAGGATGAGGGTCTGGAAGACGGCG
ACGCCGCCGCTCCCAGCCTGCCCATGAAGCAAGACGACGAATTCCGTCCT
TTCATCCGCCGTCTCCCCGAGTTCAAGTTCTGGCACTCGGCCACTCGCGC
CATTCTTATCGGCTTCGTTTGCTCGTGGTTCGCCGTCTTCGATATCCCGG
TGTTCTGGCCTGTCTTGGTGGTCTACTGGATTATTCTCTTTGTGTTGACC
AATGGACGTTCCTGAGCCTGAGCAGACGCCTTTCACGGCCGTGACGGCGC
AAACCTCGAAGCTGGCTAGGTGCGCCGCCAGATCCAGCACATGATCAAGT
ACCGCTACGTGCCGTTCTCGTTCGGTAAGACGCGGTACGGCCGGTCATAA
CAATACCAAACCTACCTCGACGCCTCCACCCCATTCACAGCCTACCGCTG
GACCGGCACCGTCGTCCTGCTCCTCGTCTTCTTCCTGAGAATCGTCCTCG
CCCAGGGATGGTACATCGTGGCCTACACCCTCGGCATCTACCTGCTCAAC
CTCTTCCTCCTCTTCCTGCAACCCAAGTTCGACCCCTCCCTGACGCAGGA
TGAGGGTCTGGAAGACGGCGACGCCGCCGCTCCCAGCCTGCCCATGAAGC
AAGACGACGAATTCCGTCCTTTCATCCGCCGTCTCCCCGAGTTCAAGTTC
TGGCACTCGGCCACTCGCGCCATTCTTATCGGCTTCGTTTGCTCGTGGTT
CGCCGTCTTCGATATCCCGGTGTTCTGGCCTGTCTTGGTGGTCTACTGGA
TTATTCTCTTTGTGTTGACCAATGGACGTTCCTGAGCCTGAGCAGACGCC
TTTCACGGCCGTGACGGCGCAAACCTCGAAGCTGGCTAGGTGCGCCGCCA
GATCCAGCACATGATCAAGTACCGCTACGTGCCGTTCTCGTTCGGTAAGA
CGCGGTACGGCCGGTCATAACAATACCAAACCTACCTCGACGCCTCCACC
CCATTCACAGCCTACCGCTGGACCGGCACCGTCGTCCTGCTCCTCGTCTT
CTTCCTGAGAATCGTCCTCGCCCAGGGATGGTACATCGTGGCCTACACCC
TCGGCATCTACCTGCTCAACCTCTTCCTCCTCTTCCTGCAACCCAAGTTC
GACCCCTCCCTGACGCAGGATGAGGGTCTGGAAGACGGCGACGCCGCCGC
TCCCAGCCTGCCCATGAAGCAAGACGACGAATTCCGTCCTTTCATCCGCC
GTCTCCCCGAGTTCAAGTTCTGGCACTCGGCCACTCGCGCCATTCTTATC
GGCTTCGTTTGCTCGTGGTTCGCCGTCTTCGATATCCCGGTGTTCTGGCC
TGTCTTGGTGGTCTACTGGATTATTCTCTTTGTGTTGACCAATGGACGTT
CCTGAGCCTGAGCAGACGCCTTTCACGGCCGTGACGGCGCAAACCTCGAA
GCTGGCTAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | BUSCO:EOG09265ANI |
| DBxref | InterPro:IPR004932 |
| DBxref | PFAM:PF03248 |
| Product | retention in endoplasmic reticulum protein 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5530726..5531521 - |
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