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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5666276..5667488+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_006055-T1 ID=KYF_006055-T1|Name=KYF_006055-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1213bp|location=Sequence derived from alignment at ch4:5666276..5667488+ (Aspergillus niger KYF3)
ATGCCACAGAGAGTCCACAAGAAATCTCGCAACGGATGTCTCGAGTGTAA
GCGGCGCCATGTCAAGGTATTAGCTTACGCTCCGGTTATCCCTACGAACC
GACTAACCTCTCCAGTGCGATGAGAGACATCCCATTTGCTCGAATTGCCA
TAGCGCCGAGCGAGTCTGTGAGTACGGAAGCCGCTCTTTGCTGAGAGCAG
CAGCTCCACGGCCAGTAGTACATGCAGCCAGAGCAGCTTCACCGCCTATA
CCTCTCGGGAGTACACCGCGGGAGAGCCCTGAAAATGAACCCTCACAGGC
GCCCTTCCGCAGCCAGGCCGTGAACATACTCCATATCGAGCTCTTCCACA
ATTTGTACACCAAGATCTGCACCAGCTTCGACCCCAACAGATCTATATCA
TGGCTAGCAGATGGTGTGGACCCTACTACAGCCCCATATCTAGTCAACGA
GCTGCTCGCATTTAGTGCCCTACACCTAAGTACGGCACGACCAGATCGCC
GCGAATACTACCGCTACCACGCAGCCCAGCTACAAACCGACGCGTTGTCC
ATTTTCCAAGCGTCCTCCCCGCAAGTAACACGAGAGAATTGCGTCCATCT
CTTCGTCTTCGCAGCTACTCTGGGTATCCACATGCTCTGCGACACACTCG
TCTACCGCGAAGGAGGCGGCGACTTTGATACCTTCCTCGACCGCTTCGTC
CACTTCTTCCGTGTTTATCATGGTGTCCGTACCATTGTTAGCAAAGCCTC
GCATATGATTCAGGATACGCCGCTCGGTTTAAGTTTCAACGTGGGCATAG
ATCTGTATAAATTTAATGGATGTCTTGGGCCCGGCTGTCAGCGCCTGATG
GATCTGATCTATAGCGCCAAGCTCGGGAACGAACTCACGGGAATATATAG
GGAGGCTGTAGAATCGTTACAGTCGTGTTTGAATGTTATAGAAGAGAATC
GGGACGAGCTGCATGTGGGAATTAATGCGGTAACTACGTGGCCTATCCTG
ATGAAGATTGAGTTCGCGGAGTCTTTGGAGCAGAGACGGCCTGAGGCACT
GATTATTTTGGCTCATTATGCGTGTTTGTTGCATCGATTTCGGGAATTTT
GGATGTTTGGGGATTCGGGGCAGTTTGTTATCCTGGAGGTTATGGGATGC
TTGGGGGAGGAGTGGGAGGAGTGGTTGGCGTGGCCGAAGGAGGTTCTAGA
TGATATTAACTAG back to topCoding sequence (CDS) from alignment at ch4:5666276..5667488+ >KYF_006055-T1 ID=KYF_006055-T1|Name=KYF_006055-T1|organism=Aspergillus niger KYF3|type=CDS|length=2328bp|location=Sequence derived from alignment at ch4:5666276..5667488+ (Aspergillus niger KYF3)
ATGCCACAGAGAGTCCACAAGAAATCTCGCAACGGATGTCTCGAGTGTAA
GCGGCGCCATGTCAAGTGCGATGAGAGACATCCCATTTGCTCGAATTGCC
ATAGCGCCGAGCGAGTCTGTGAGTACGGAAGCCGCTCTTTGCTGAGAGCA
GCAGCTCCACGGCCAGTAGTACATGCAGCCAGAGCAGCTTCACCGCCTAT
ACCTCTCGGGAGTACACCGCGGGAGAGCCCTGAAAATGAACCCTCACAGG
CGCCCTTCCGCAGCCAGGCCGTGAACATACTCCATATCGAGCTCTTCCAC
AATTTGTACACCAAGATCTGCACCAGCTTCGACCCCAACAGATCTATATC
ATGGCTAGCAGATGGTGTGGACCCTACTACAGCCCCATATCTAGTCAACG
AGCTGCTCGCATTTAGTGCCCTACACCTAAGTACGGCACGACCAGATCGC
CGCGAATACTACCGCTACCACGCAGCCCAGCTACAAACCGACGCGTTGTC
CATTTTCCAAGCGTCCTCCCCGCAAGTAACACGAGAGAATTGCGTCCATC
TCTTCGTCTTCGCAGCTACTCTGGGTATCCACATGCTCTGCGACACACTC
GTCTACCGCGAAGGAGGCGGCGACTTTGATACCTTCCTCGACCGCTTCGT
CCACTTCTTCCGTGTTTATCATGGTGTCCGTACCATTGTTAGCAAAGCCT
CGCATATGATTCAGGATACGCCGCTCGGTTTAAGTTTCAACGTGGGCATA
GATCTGTATAAATTTAATGGATGTCTTGGGCCCGGCTGTCAGCGCCTGAT
GGATCTGATCTATAGCGCCAAGCTCGGGAACGAACTCACGGGAATATATA
GGGAGGCTGTAGAATCGTTACAGTCGTGTTTGAATGTTATAGAAGAGAAT
CGGGACGAGCTGCATGTGGGAATTAATGCGGTAACTACGTGGCCTATCCT
GATGAAGATTGAGTTCGCGGAGTCTTTGGAGCAGAGACGGCCTGAGGCAC
TGATTATTTTGGCTCATTATGCGTGTTTGTTGCATCGATTTCGGGAATTT
TGGATGTTTGGGGATTCGGGGCAGTTTGTTATCCTGGAGGTTATGGGATG
CTTGGGGGAGGAGTGGGAGGAGTGGTTGGCGTGGCCGAAGGAGGTTCTAG
ATGATATTAACTAGATGCCACAGAGAGTCCACAAGAAATCTCGCAACGGA
TGTCTCGAGTGTAAGCGGCGCCATGTCAAGTGCGATGAGAGACATCCCAT
TTGCTCGAATTGCCATAGCGCCGAGCGAGTCTGTGAGTACGGAAGCCGCT
CTTTGCTGAGAGCAGCAGCTCCACGGCCAGTAGTACATGCAGCCAGAGCA
GCTTCACCGCCTATACCTCTCGGGAGTACACCGCGGGAGAGCCCTGAAAA
TGAACCCTCACAGGCGCCCTTCCGCAGCCAGGCCGTGAACATACTCCATA
TCGAGCTCTTCCACAATTTGTACACCAAGATCTGCACCAGCTTCGACCCC
AACAGATCTATATCATGGCTAGCAGATGGTGTGGACCCTACTACAGCCCC
ATATCTAGTCAACGAGCTGCTCGCATTTAGTGCCCTACACCTAAGTACGG
CACGACCAGATCGCCGCGAATACTACCGCTACCACGCAGCCCAGCTACAA
ACCGACGCGTTGTCCATTTTCCAAGCGTCCTCCCCGCAAGTAACACGAGA
GAATTGCGTCCATCTCTTCGTCTTCGCAGCTACTCTGGGTATCCACATGC
TCTGCGACACACTCGTCTACCGCGAAGGAGGCGGCGACTTTGATACCTTC
CTCGACCGCTTCGTCCACTTCTTCCGTGTTTATCATGGTGTCCGTACCAT
TGTTAGCAAAGCCTCGCATATGATTCAGGATACGCCGCTCGGTTTAAGTT
TCAACGTGGGCATAGATCTGTATAAATTTAATGGATGTCTTGGGCCCGGC
TGTCAGCGCCTGATGGATCTGATCTATAGCGCCAAGCTCGGGAACGAACT
CACGGGAATATATAGGGAGGCTGTAGAATCGTTACAGTCGTGTTTGAATG
TTATAGAAGAGAATCGGGACGAGCTGCATGTGGGAATTAATGCGGTAACT
ACGTGGCCTATCCTGATGAAGATTGAGTTCGCGGAGTCTTTGGAGCAGAG
ACGGCCTGAGGCACTGATTATTTTGGCTCATTATGCGTGTTTGTTGCATC
GATTTCGGGAATTTTGGATGTTTGGGGATTCGGGGCAGTTTGTTATCCTG
GAGGTTATGGGATGCTTGGGGGAGGAGTGGGAGGAGTGGTTGGCGTGGCC
GAAGGAGGTTCTAGATGATATTAACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5666276..5667488 + |
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