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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5685681..5686726- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_006062-T1 ID=KYF_006062-T1|Name=KYF_006062-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1046bp|location=Sequence derived from alignment at ch4:5685681..5686726- (Aspergillus niger KYF3)
ATGGCGACCACGTTGGCTGATCACAAACGTCCTCAATTACAGCCCGTGTG
CCAGAATTGCGGCACTTCTACGACACCTCTCTGGCGCAGGGACGAACTCG
GCTCCGTCCTTTGCAACGCCTGTGGCTTGTTCCTCAAACTACATGGCAGG
CCCCGTCCGATAAGCTTAAAGACCGATGTCATCAAAAGTCGCAACCGGGT
CAAGACTGCTGGTCAGGGCCCCAAGCGTAAGGTGAGTCTGTCGTCTAGAA
AATTTTTCCCTGGCTGTCCTATGTCTTTGTACACCTGAGATAACGATCGC
TAACATTCCTATCAATGTCTTATCAGTCCGGCGGTGCTATCGATACGAAT
GGCTTGTCTACCTCGAGGTCCGAAGCAGGGACGCCGCCCATGGGGTCCCA
AGGATACCGTCGCGCGTCGCGAAAGGCATCACCGGGCCATTCCGACCGAT
CCAACTCACCCGTCTCCCGTACCGAAACGCCTGGTATCCCTTCCATGCAA
CAACCACACCCTCAGTCGCAACACAATGCCAACATTGCGCCTCAGCACAT
GTTCGATAGCGTCACAATCGGCGACCATGGGCTCAATCAGCCGAATGCGC
TGCCCTCGGTGCAGCCACGCCAGCCGTCGCCCACGGCGACCTCGGCGGCT
GTCGACCGCCATCTCGAGTCACCACAGACATACGATGGACTGCTCGCAGC
CAATACCTCGTTGAAGACTCGCGTGAGCGAATTGGAGTTTATCAATGAAC
TGTTCCGGGGCCGGGTGACGGAACTGGAGCAGAGCGGCGCGACTGCGCGC
CGATCGGAGATGATCGTCCGGGACTCGGAGGTACGGCTCCGGCGGTCTCT
GGAGGAGGCCCAACGGCGCGAAGACGATCTGAAACGGAGGATATCTGAGC
TGGAGCGACAGCTTACCGACCAAACCTCCTCTGCCAACCCGGCGGGCAAT
GACAGTCCCGGTGAGCCGCTGGCCAAGCGGATGCGGCTGTCCGACGTCGT
GGAGCAACCTGCGGAGTCGCCAACAAAATCCCCCAAGAGTGTCTAA back to topCoding sequence (CDS) from alignment at ch4:5685681..5686726- >KYF_006062-T1 ID=KYF_006062-T1|Name=KYF_006062-T1|organism=Aspergillus niger KYF3|type=CDS|length=1902bp|location=Sequence derived from alignment at ch4:5685681..5686726- (Aspergillus niger KYF3)
TCCGGCGGTGCTATCGATACGAATGGCTTGTCTACCTCGAGGTCCGAAGC
AGGGACGCCGCCCATGGGGTCCCAAGGATACCGTCGCGCGTCGCGAAAGG
CATCACCGGGCCATTCCGACCGATCCAACTCACCCGTCTCCCGTACCGAA
ACGCCTGGTATCCCTTCCATGCAACAACCACACCCTCAGTCGCAACACAA
TGCCAACATTGCGCCTCAGCACATGTTCGATAGCGTCACAATCGGCGACC
ATGGGCTCAATCAGCCGAATGCGCTGCCCTCGGTGCAGCCACGCCAGCCG
TCGCCCACGGCGACCTCGGCGGCTGTCGACCGCCATCTCGAGTCACCACA
GACATACGATGGACTGCTCGCAGCCAATACCTCGTTGAAGACTCGCGTGA
GCGAATTGGAGTTTATCAATGAACTGTTCCGGGGCCGGGTGACGGAACTG
GAGCAGAGCGGCGCGACTGCGCGCCGATCGGAGATGATCGTCCGGGACTC
GGAGGTACGGCTCCGGCGGTCTCTGGAGGAGGCCCAACGGCGCGAAGACG
ATCTGAAACGGAGGATATCTGAGCTGGAGCGACAGCTTACCGACCAAACC
TCCTCTGCCAACCCGGCGGGCAATGACAGTCCCGGTGAGCCGCTGGCCAA
GCGGATGCGGCTGTCCGACGTCGTGGAGCAACCTGCGGAGTCGCCAACAA
AATCCCCCAAGAGTGTCTAAATGGCGACCACGTTGGCTGATCACAAACGT
CCTCAATTACAGCCCGTGTGCCAGAATTGCGGCACTTCTACGACACCTCT
CTGGCGCAGGGACGAACTCGGCTCCGTCCTTTGCAACGCCTGTGGCTTGT
TCCTCAAACTACATGGCAGGCCCCGTCCGATAAGCTTAAAGACCGATGTC
ATCAAAAGTCGCAACCGGGTCAAGACTGCTGGTCAGGGCCCCAAGCGTAA
GTCCGGCGGTGCTATCGATACGAATGGCTTGTCTACCTCGAGGTCCGAAG
CAGGGACGCCGCCCATGGGGTCCCAAGGATACCGTCGCGCGTCGCGAAAG
GCATCACCGGGCCATTCCGACCGATCCAACTCACCCGTCTCCCGTACCGA
AACGCCTGGTATCCCTTCCATGCAACAACCACACCCTCAGTCGCAACACA
ATGCCAACATTGCGCCTCAGCACATGTTCGATAGCGTCACAATCGGCGAC
CATGGGCTCAATCAGCCGAATGCGCTGCCCTCGGTGCAGCCACGCCAGCC
GTCGCCCACGGCGACCTCGGCGGCTGTCGACCGCCATCTCGAGTCACCAC
AGACATACGATGGACTGCTCGCAGCCAATACCTCGTTGAAGACTCGCGTG
AGCGAATTGGAGTTTATCAATGAACTGTTCCGGGGCCGGGTGACGGAACT
GGAGCAGAGCGGCGCGACTGCGCGCCGATCGGAGATGATCGTCCGGGACT
CGGAGGTACGGCTCCGGCGGTCTCTGGAGGAGGCCCAACGGCGCGAAGAC
GATCTGAAACGGAGGATATCTGAGCTGGAGCGACAGCTTACCGACCAAAC
CTCCTCTGCCAACCCGGCGGGCAATGACAGTCCCGGTGAGCCGCTGGCCA
AGCGGATGCGGCTGTCCGACGTCGTGGAGCAACCTGCGGAGTCGCCAACA
AAATCCCCCAAGAGTGTCTAAATGGCGACCACGTTGGCTGATCACAAACG
TCCTCAATTACAGCCCGTGTGCCAGAATTGCGGCACTTCTACGACACCTC
TCTGGCGCAGGGACGAACTCGGCTCCGTCCTTTGCAACGCCTGTGGCTTG
TTCCTCAAACTACATGGCAGGCCCCGTCCGATAAGCTTAAAGACCGATGT
CATCAAAAGTCGCAACCGGGTCAAGACTGCTGGTCAGGGCCCCAAGCGTA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0043565 | sequence-specific DNA binding |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013088 |
| DBxref | InterPro:IPR000679 |
| DBxref | PFAM:PF00320 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5685681..5686726 - |
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