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KYF_006305-T1, KYF_006305-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_006305-T1
Unique NameKYF_006305-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:116145..117407+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_006305-T1 ID=KYF_006305-T1|Name=KYF_006305-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1263bp|location=Sequence derived from alignment at ch5:116145..117407+ (Aspergillus niger KYF3)
ATGCGCACTTCTCGAGCTTCTAAAGAGACTGCGAAGGTTTTGCAGGCTTT
GTCGCCTCCTGCTCGTCGACAAACTCGCAGTTCGGCTCAGGCTGCGAGTC
TCCTTCAGGGCTTTGCTTTTGGGGGTGGCGGTACTGCGCCGGATGCATCT
GTCAGTGATGATGATACTTCTTCGCTCTCGTCGGTGCCGACGGTTGATAT
CGAGGATATCGTAGAGCCGCCGGCCAAGCGTCGCAAGAGTGCTTTGAGTG
GTACGTCCACTAGGACGAGTGCGCGCACTACCCGGAGGGCTGTCAAAGCA
GAGACCCCTGTCAAAGCAGAGACTTCTGCCAAAGAGGAAGCACCTATCAA
AGAAGAGCCGGTTGAGAAGCCCCAAAAGGCACGACGGATGCCCGCGCGCA
AGATCAAAATCGAGAATGGCGGTTATTCCATGGAGCCGCCGTCCAACTGG
GAGACTATGTATGACATGGTCAAGAAGATGCGAGAGGCAAATCCCACTGC
ACCCGTTGATACCATGGGCTGTGCCGAACTCTACTGGCGTGCATCCTCTC
CACGCGATCGTCGTTTCCAAACTCTCATCGCGCTGATGCTGTCGTCCCAG
ACCAAGGACACAGTCACGGCGGTGGCCATGCAGCGGTTGCACACAGAGCT
TGGGGACCAGTCGACAACCGTTGTGAAGAAGGAGCCCGAAGATTATGACT
GGAAGCCCACGGACCAGGTCAAGGACAGCACTTTGAACCTGGAGAACATC
CTAGCCGTCACCCCTGAGCGCCTCAACGAGCTTATTGCCAAGGTGGGCTT
CCACAACAACAAGACCAAGTATATCAAGGCCGCGGCCATTATCCTCCGCG
ATCAATATAACTCCGATATCCCGTCCACTGCTCCTGAACTGATGAAGCTC
CCGGGCGTCGGTCCGAAGATGGCGTTTCTTTGCATGAGCGCGGCGTGGGG
CAAGCACGAAGGCATTGGCGTTGATGTTCACGTTCACCGGATTACCAACC
TTTGGGGCTGGCACAAGACGAAGAATCCCGAGGAAACTCGCATGGCGCTG
GAGTCGTGGCTACCAAAAGACAAGTGGCACGAGATCAACAAACTCTTGGT
CGGCTTAGGACAGACGGTCTGCTTACCTGTGGCCCGGAGATGCGGAGAAT
GCGATCTTGCGGGAACGAAGCTCTGTAAGAGCGAAATCAGGGGTCTGGTA
ACACTGAAGCGAGACGCTGCTGTGAAGCAGGAGGAGCCGAAGGTGAAGGT
CGAGCAGGAGTAG
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Coding sequence (CDS) from alignment at ch5:116145..117407+

>KYF_006305-T1 ID=KYF_006305-T1|Name=KYF_006305-T1|organism=Aspergillus niger KYF3|type=CDS|length=1263bp|location=Sequence derived from alignment at ch5:116145..117407+ (Aspergillus niger KYF3)
ATGCGCACTTCTCGAGCTTCTAAAGAGACTGCGAAGGTTTTGCAGGCTTT
GTCGCCTCCTGCTCGTCGACAAACTCGCAGTTCGGCTCAGGCTGCGAGTC
TCCTTCAGGGCTTTGCTTTTGGGGGTGGCGGTACTGCGCCGGATGCATCT
GTCAGTGATGATGATACTTCTTCGCTCTCGTCGGTGCCGACGGTTGATAT
CGAGGATATCGTAGAGCCGCCGGCCAAGCGTCGCAAGAGTGCTTTGAGTG
GTACGTCCACTAGGACGAGTGCGCGCACTACCCGGAGGGCTGTCAAAGCA
GAGACCCCTGTCAAAGCAGAGACTTCTGCCAAAGAGGAAGCACCTATCAA
AGAAGAGCCGGTTGAGAAGCCCCAAAAGGCACGACGGATGCCCGCGCGCA
AGATCAAAATCGAGAATGGCGGTTATTCCATGGAGCCGCCGTCCAACTGG
GAGACTATGTATGACATGGTCAAGAAGATGCGAGAGGCAAATCCCACTGC
ACCCGTTGATACCATGGGCTGTGCCGAACTCTACTGGCGTGCATCCTCTC
CACGCGATCGTCGTTTCCAAACTCTCATCGCGCTGATGCTGTCGTCCCAG
ACCAAGGACACAGTCACGGCGGTGGCCATGCAGCGGTTGCACACAGAGCT
TGGGGACCAGTCGACAACCGTTGTGAAGAAGGAGCCCGAAGATTATGACT
GGAAGCCCACGGACCAGGTCAAGGACAGCACTTTGAACCTGGAGAACATC
CTAGCCGTCACCCCTGAGCGCCTCAACGAGCTTATTGCCAAGGTGGGCTT
CCACAACAACAAGACCAAGTATATCAAGGCCGCGGCCATTATCCTCCGCG
ATCAATATAACTCCGATATCCCGTCCACTGCTCCTGAACTGATGAAGCTC
CCGGGCGTCGGTCCGAAGATGGCGTTTCTTTGCATGAGCGCGGCGTGGGG
CAAGCACGAAGGCATTGGCGTTGATGTTCACGTTCACCGGATTACCAACC
TTTGGGGCTGGCACAAGACGAAGAATCCCGAGGAAACTCGCATGGCGCTG
GAGTCGTGGCTACCAAAAGACAAGTGGCACGAGATCAACAAACTCTTGGT
CGGCTTAGGACAGACGGTCTGCTTACCTGTGGCCCGGAGATGCGGAGAAT
GCGATCTTGCGGGAACGAAGCTCTGTAAGAGCGAAATCAGGGGTCTGGTA
ACACTGAAGCGAGACGCTGCTGTGAAGCAGGAGGAGCCGAAGGTGAAGGT
CGAGCAGGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0019104DNA N-glycosylase activity
GO:0003906DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006285base-excision repair, AP site formation
GO:0006284base-excision repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NTH1KYF_006305Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006305-T1.exon1KYF_006305-T1.exon1Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006305-T1.cdsKYF_006305-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_006305-T1KYF_006305-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263R4M
DBxrefInterPro:IPR011257
DBxrefInterPro:IPR030841
DBxrefInterPro:IPR004036
DBxrefInterPro:IPR023170
DBxrefInterPro:IPR000445
DBxrefInterPro:IPR003265
DBxrefPFAM:PF00730
DBxrefPFAM:PF00633
Productalpha-trehalase nth1
Productalpha
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:116145..117407 +
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