You are here

Home

KYF_006373-T1, KYF_006373-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_006373-T1
Unique NameKYF_006373-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:405811..407422-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_006373-T1 ID=KYF_006373-T1|Name=KYF_006373-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1612bp|location=Sequence derived from alignment at ch5:405811..407422- (Aspergillus niger KYF3)
ATGGCCTTCACAACCAGACTTGCGACCTGGCTTTGGGGTCACGATCCGAA
GGATCGGGCTCTGCTTGCCAAGCTGGATGTGACTCTGCTCCCTTATTTTT
CCCTAATTTGGTTCCTTTTCGGTGTGACACGGTCTAGCTATTCCTCGGCC
TACATCAGCGGCATGAAAGAGGCTCTCGGGTTCAAGGGGAAAGAGTACAA
TTACATGAGCACCGCATACCTGGTCGTCTATGCCGTCTGCCAAATGCCCG
GTACAAGCCTTCTCACAATAATGCGACCGAAATATGTCTTTGTTACTGCC
AATGTTACTTGGAGTGTCTTGACCTTGATCACGTACAAGATGACACGGGC
CTGGCAGGTCATTCTGTTAAATGCGATCGAAGGAGGGTTCTCAGCTATCG
CATAGTAATTGCCTAATCTACTTTGCACGTGAAACTGTTCTGACCGGTAC
TAATTTTGAATAGCGTTGGCGCACAATTCATCCTAGCGTCGTGGTACAAA
AAGTCGGAGCTCGGGATGCGGGCAGCGGTATTCTGCGTGTTCGGCCAATT
GGGGACGCTGTCCGGTGGCTGGATTCAAGCCGGTCTGCTAGAGACACTCG
CTGGTAAAGGTGGCCTACCCGCATGGAAGTGGATATTCATCATCGTCTCA
GTGATGACTCTTCCGGTGGCACTCTTCGGTATGGCTTGTACTCTGTCCCA
GTGGGAAAATGCTGACAATTTCGTAGGCTGGGTCTTCATTCCGGACCTTC
CATCACATCGTGCAGCCTGGTATCTTACCGATGAACAGAAGGAACATGCG
GCAACTCGACTGGGTACCCTTTCCAAGAAGTCCTGGGACATCACAGTCTT
CAAGCGCGTCTTGCTGAGCTGGCAATTCTGGCTCCTGCCGTTTGTTTTCA
TGTGTAGGTCGAGAGAGTTTTGTCTTCGAGTCACCGAGCTAATATCCAAT
CAGTGTATTCAGTTTGTGTGCAAATGCTAGGGAACAACGTCATGGCCTAC
TGGCTAGCCTCACGGGGGTACACGGTCGTCCAGCAGAACACCTATCCTAC
CGTCATCCATGCCACTGCCGTTGTGGGGATAGTTGTGTATGCCGCAATTT
CAGACAAGTTACAATCGCGATGGGAGGTCTCTATCGCCATTGGTCTAACT
TTTGTCATCGGCTCAGCTATCCTTGTATCGACCCCTTCCACGGACGCTGG
CTACTTTGTTGCCTTCTACTTGCTCGGAACGACATACGCGCCTCAGGCTG
TCTGGTATTCCTGGATGGCCGACGTTACAGGCCATGACCTCCAGCTGCGT
GCCATCACAACTGGATTTATGAACTCCTTTGACTTTGCTTTTGTGACCTG
GTGGCCGTTGGTCTTCTATCCAGTAACCGATTCGCCCAACTTCAGAAAAG
GGTATATTGCGAGCTTAGTGACGGGGATGTTAACTCTCCCAGTTATCGGT
CTTATCGCTTACCTCGAAAAAAGGGACACCGCCAGAGGAATCATTGGAAG
ATCTCGTACTGATAGTTTGCTCGAAGAAGAGCCGGTTCTTTCCCCAGATG
ATGAAACGGGAAAGCCTGGAAGCCCTCCGATAACCGTGCGCGCCACTGAG
GACGGTGTGTAG
back to top

Coding sequence (CDS) from alignment at ch5:405811..407422-

>KYF_006373-T1 ID=KYF_006373-T1|Name=KYF_006373-T1|organism=Aspergillus niger KYF3|type=CDS|length=5820bp|location=Sequence derived from alignment at ch5:405811..407422- (Aspergillus niger KYF3)
TGTATTCAGTTTGTGTGCAAATGCTAGGGAACAACGTCATGGCCTACTGG
CTAGCCTCACGGGGGTACACGGTCGTCCAGCAGAACACCTATCCTACCGT
CATCCATGCCACTGCCGTTGTGGGGATAGTTGTGTATGCCGCAATTTCAG
ACAAGTTACAATCGCGATGGGAGGTCTCTATCGCCATTGGTCTAACTTTT
GTCATCGGCTCAGCTATCCTTGTATCGACCCCTTCCACGGACGCTGGCTA
CTTTGTTGCCTTCTACTTGCTCGGAACGACATACGCGCCTCAGGCTGTCT
GGTATTCCTGGATGGCCGACGTTACAGGCCATGACCTCCAGCTGCGTGCC
ATCACAACTGGATTTATGAACTCCTTTGACTTTGCTTTTGTGACCTGGTG
GCCGTTGGTCTTCTATCCAGTAACCGATTCGCCCAACTTCAGAAAAGGGT
ATATTGCGAGCTTAGTGACGGGGATGTTAACTCTCCCAGTTATCGGTCTT
ATCGCTTACCTCGAAAAAAGGGACACCGCCAGAGGAATCATTGGAAGATC
TCGTACTGATAGTTTGCTCGAAGAAGAGCCGGTTCTTTCCCCAGATGATG
AAACGGGAAAGCCTGGAAGCCCTCCGATAACCGTGCGCGCCACTGAGGAC
GGTGTGTAGGCTGGGTCTTCATTCCGGACCTTCCATCACATCGTGCAGCC
TGGTATCTTACCGATGAACAGAAGGAACATGCGGCAACTCGACTGGGTAC
CCTTTCCAAGAAGTCCTGGGACATCACAGTCTTCAAGCGCGTCTTGCTGA
GCTGGCAATTCTGGCTCCTGCCGTTTGTTTTCATGTCGTTGGCGCACAAT
TCATCCTAGCGTCGTGGTACAAAAAGTCGGAGCTCGGGATGCGGGCAGCG
GTATTCTGCGTGTTCGGCCAATTGGGGACGCTGTCCGGTGGCTGGATTCA
AGCCGGTCTGCTAGAGACACTCGCTGGTAAAGGTGGCCTACCCGCATGGA
AGTGGATATTCATCATCGTCTCAGTGATGACTCTTCCGGTGGCACTCTTC
GATGGCCTTCACAACCAGACTTGCGACCTGGCTTTGGGGTCACGATCCGA
AGGATCGGGCTCTGCTTGCCAAGCTGGATGTGACTCTGCTCCCTTATTTT
TCCCTAATTTGGTTCCTTTTCGGTGTGACACGGTCTAGCTATTCCTCGGC
CTACATCAGCGGCATGAAAGAGGCTCTCGGGTTCAAGGGGAAAGAGTACA
ATTACATGAGCACCGCATACCTGGTCGTCTATGCCGTCTGCCAAATGCCC
GGTACAAGCCTTCTCACAATAATGCGACCGAAATATGTCTTTGTTACTGC
CAATGTTACTTGGAGTGTCTTGACCTTGATCACGTACAAGATGACACGGG
CCTGGCAGGTCATTCTGTTAAATGCGATCGAAGGAGGGTTCTCAGCTATC
GCATATGTATTCAGTTTGTGTGCAAATGCTAGGGAACAACGTCATGGCCT
ACTGGCTAGCCTCACGGGGGTACACGGTCGTCCAGCAGAACACCTATCCT
ACCGTCATCCATGCCACTGCCGTTGTGGGGATAGTTGTGTATGCCGCAAT
TTCAGACAAGTTACAATCGCGATGGGAGGTCTCTATCGCCATTGGTCTAA
CTTTTGTCATCGGCTCAGCTATCCTTGTATCGACCCCTTCCACGGACGCT
GGCTACTTTGTTGCCTTCTACTTGCTCGGAACGACATACGCGCCTCAGGC
TGTCTGGTATTCCTGGATGGCCGACGTTACAGGCCATGACCTCCAGCTGC
GTGCCATCACAACTGGATTTATGAACTCCTTTGACTTTGCTTTTGTGACC
TGGTGGCCGTTGGTCTTCTATCCAGTAACCGATTCGCCCAACTTCAGAAA
AGGGTATATTGCGAGCTTAGTGACGGGGATGTTAACTCTCCCAGTTATCG
GTCTTATCGCTTACCTCGAAAAAAGGGACACCGCCAGAGGAATCATTGGA
AGATCTCGTACTGATAGTTTGCTCGAAGAAGAGCCGGTTCTTTCCCCAGA
TGATGAAACGGGAAAGCCTGGAAGCCCTCCGATAACCGTGCGCGCCACTG
AGGACGGTGTGTAGGCTGGGTCTTCATTCCGGACCTTCCATCACATCGTG
CAGCCTGGTATCTTACCGATGAACAGAAGGAACATGCGGCAACTCGACTG
GGTACCCTTTCCAAGAAGTCCTGGGACATCACAGTCTTCAAGCGCGTCTT
GCTGAGCTGGCAATTCTGGCTCCTGCCGTTTGTTTTCATGTCGTTGGCGC
ACAATTCATCCTAGCGTCGTGGTACAAAAAGTCGGAGCTCGGGATGCGGG
CAGCGGTATTCTGCGTGTTCGGCCAATTGGGGACGCTGTCCGGTGGCTGG
ATTCAAGCCGGTCTGCTAGAGACACTCGCTGGTAAAGGTGGCCTACCCGC
ATGGAAGTGGATATTCATCATCGTCTCAGTGATGACTCTTCCGGTGGCAC
TCTTCGATGGCCTTCACAACCAGACTTGCGACCTGGCTTTGGGGTCACGA
TCCGAAGGATCGGGCTCTGCTTGCCAAGCTGGATGTGACTCTGCTCCCTT
ATTTTTCCCTAATTTGGTTCCTTTTCGGTGTGACACGGTCTAGCTATTCC
TCGGCCTACATCAGCGGCATGAAAGAGGCTCTCGGGTTCAAGGGGAAAGA
GTACAATTACATGAGCACCGCATACCTGGTCGTCTATGCCGTCTGCCAAA
TGCCCGGTACAAGCCTTCTCACAATAATGCGACCGAAATATGTCTTTGTT
ACTGCCAATGTTACTTGGAGTGTCTTGACCTTGATCACGTACAAGATGAC
ACGGGCCTGGCAGGTCATTCTGTTAAATGCGATCGAAGGAGGGTTCTCAG
CTATCGCATATGTATTCAGTTTGTGTGCAAATGCTAGGGAACAACGTCAT
GGCCTACTGGCTAGCCTCACGGGGGTACACGGTCGTCCAGCAGAACACCT
ATCCTACCGTCATCCATGCCACTGCCGTTGTGGGGATAGTTGTGTATGCC
GCAATTTCAGACAAGTTACAATCGCGATGGGAGGTCTCTATCGCCATTGG
TCTAACTTTTGTCATCGGCTCAGCTATCCTTGTATCGACCCCTTCCACGG
ACGCTGGCTACTTTGTTGCCTTCTACTTGCTCGGAACGACATACGCGCCT
CAGGCTGTCTGGTATTCCTGGATGGCCGACGTTACAGGCCATGACCTCCA
GCTGCGTGCCATCACAACTGGATTTATGAACTCCTTTGACTTTGCTTTTG
TGACCTGGTGGCCGTTGGTCTTCTATCCAGTAACCGATTCGCCCAACTTC
AGAAAAGGGTATATTGCGAGCTTAGTGACGGGGATGTTAACTCTCCCAGT
TATCGGTCTTATCGCTTACCTCGAAAAAAGGGACACCGCCAGAGGAATCA
TTGGAAGATCTCGTACTGATAGTTTGCTCGAAGAAGAGCCGGTTCTTTCC
CCAGATGATGAAACGGGAAAGCCTGGAAGCCCTCCGATAACCGTGCGCGC
CACTGAGGACGGTGTGTAGGCTGGGTCTTCATTCCGGACCTTCCATCACA
TCGTGCAGCCTGGTATCTTACCGATGAACAGAAGGAACATGCGGCAACTC
GACTGGGTACCCTTTCCAAGAAGTCCTGGGACATCACAGTCTTCAAGCGC
GTCTTGCTGAGCTGGCAATTCTGGCTCCTGCCGTTTGTTTTCATGTCGTT
GGCGCACAATTCATCCTAGCGTCGTGGTACAAAAAGTCGGAGCTCGGGAT
GCGGGCAGCGGTATTCTGCGTGTTCGGCCAATTGGGGACGCTGTCCGGTG
GCTGGATTCAAGCCGGTCTGCTAGAGACACTCGCTGGTAAAGGTGGCCTA
CCCGCATGGAAGTGGATATTCATCATCGTCTCAGTGATGACTCTTCCGGT
GGCACTCTTCGATGGCCTTCACAACCAGACTTGCGACCTGGCTTTGGGGT
CACGATCCGAAGGATCGGGCTCTGCTTGCCAAGCTGGATGTGACTCTGCT
CCCTTATTTTTCCCTAATTTGGTTCCTTTTCGGTGTGACACGGTCTAGCT
ATTCCTCGGCCTACATCAGCGGCATGAAAGAGGCTCTCGGGTTCAAGGGG
AAAGAGTACAATTACATGAGCACCGCATACCTGGTCGTCTATGCCGTCTG
CCAAATGCCCGGTACAAGCCTTCTCACAATAATGCGACCGAAATATGTCT
TTGTTACTGCCAATGTTACTTGGAGTGTCTTGACCTTGATCACGTACAAG
ATGACACGGGCCTGGCAGGTCATTCTGTTAAATGCGATCGAAGGAGGGTT
CTCAGCTATCGCATATGTATTCAGTTTGTGTGCAAATGCTAGGGAACAAC
GTCATGGCCTACTGGCTAGCCTCACGGGGGTACACGGTCGTCCAGCAGAA
CACCTATCCTACCGTCATCCATGCCACTGCCGTTGTGGGGATAGTTGTGT
ATGCCGCAATTTCAGACAAGTTACAATCGCGATGGGAGGTCTCTATCGCC
ATTGGTCTAACTTTTGTCATCGGCTCAGCTATCCTTGTATCGACCCCTTC
CACGGACGCTGGCTACTTTGTTGCCTTCTACTTGCTCGGAACGACATACG
CGCCTCAGGCTGTCTGGTATTCCTGGATGGCCGACGTTACAGGCCATGAC
CTCCAGCTGCGTGCCATCACAACTGGATTTATGAACTCCTTTGACTTTGC
TTTTGTGACCTGGTGGCCGTTGGTCTTCTATCCAGTAACCGATTCGCCCA
ACTTCAGAAAAGGGTATATTGCGAGCTTAGTGACGGGGATGTTAACTCTC
CCAGTTATCGGTCTTATCGCTTACCTCGAAAAAAGGGACACCGCCAGAGG
AATCATTGGAAGATCTCGTACTGATAGTTTGCTCGAAGAAGAGCCGGTTC
TTTCCCCAGATGATGAAACGGGAAAGCCTGGAAGCCCTCCGATAACCGTG
CGCGCCACTGAGGACGGTGTGTAGGCTGGGTCTTCATTCCGGACCTTCCA
TCACATCGTGCAGCCTGGTATCTTACCGATGAACAGAAGGAACATGCGGC
AACTCGACTGGGTACCCTTTCCAAGAAGTCCTGGGACATCACAGTCTTCA
AGCGCGTCTTGCTGAGCTGGCAATTCTGGCTCCTGCCGTTTGTTTTCATG
TCGTTGGCGCACAATTCATCCTAGCGTCGTGGTACAAAAAGTCGGAGCTC
GGGATGCGGGCAGCGGTATTCTGCGTGTTCGGCCAATTGGGGACGCTGTC
CGGTGGCTGGATTCAAGCCGGTCTGCTAGAGACACTCGCTGGTAAAGGTG
GCCTACCCGCATGGAAGTGGATATTCATCATCGTCTCAGTGATGACTCTT
CCGGTGGCACTCTTCGATGGCCTTCACAACCAGACTTGCGACCTGGCTTT
GGGGTCACGATCCGAAGGATCGGGCTCTGCTTGCCAAGCTGGATGTGACT
CTGCTCCCTTATTTTTCCCTAATTTGGTTCCTTTTCGGTGTGACACGGTC
TAGCTATTCCTCGGCCTACATCAGCGGCATGAAAGAGGCTCTCGGGTTCA
AGGGGAAAGAGTACAATTACATGAGCACCGCATACCTGGTCGTCTATGCC
GTCTGCCAAATGCCCGGTACAAGCCTTCTCACAATAATGCGACCGAAATA
TGTCTTTGTTACTGCCAATGTTACTTGGAGTGTCTTGACCTTGATCACGT
ACAAGATGACACGGGCCTGGCAGGTCATTCTGTTAAATGCGATCGAAGGA
GGGTTCTCAGCTATCGCATA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_006373KYF_006373Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_006373-T1KYF_006373-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006373-T1.cdsKYF_006373-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006373-T1.exon4KYF_006373-T1.exon4Aspergillus niger KYF3exon
KYF_006373-T1.exon3KYF_006373-T1.exon3Aspergillus niger KYF3exon
KYF_006373-T1.exon2KYF_006373-T1.exon2Aspergillus niger KYF3exon
KYF_006373-T1.exon1KYF_006373-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:405811..407422 -
Powered by Drupal