You are here

Home

KYF_006378-T1, KYF_006378-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_006378-T1
Unique NameKYF_006378-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:416853..417720-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_006378-T1 ID=KYF_006378-T1|Name=KYF_006378-T1|organism=Aspergillus niger KYF3|type=mRNA|length=868bp|location=Sequence derived from alignment at ch5:416853..417720- (Aspergillus niger KYF3)
ATGGCTAATATGACAGAGGCTATTCACGATTACTATCCTTCTACGATCGA
CTTGCCTCATTATGTAACTAACGAGAGTTCGACCTTTTCACTGGTCGCTC
AATTTGCTGTCCTTTGGGGTTTGGCCCTGGGTATAGCGTCCATCATCATT
CGTCGTCCGCGAACACCGGTGACTCAATCAGACCAGTTTGCATTTATCTG
GATGTGCTTCAGTAAGTCGTGTCATATTCTCTACTTCTGCATGGAACAAT
TATTGACGGAGGAAAATCAGCCGGATGCATACATCTATTTTTTGAAAGCT
ACTTCGTGGTCTACCACAAGACCCTAGCCGGCTCGCACACTTTATTCGGC
CAACTCTGGAAGGAATATTCCCTTTCTGACTCACGCTACCTGACCTCAGA
TTCATTCCTTGTGTCTATGGAAGCAGTTACCGCTGTAAGTCCTTATATCC
AACACCCTGACACCTAATCAACTCATCATCAACTAACTTGTATAGTTTTG
CTGGGGCCCGCTCGCATTCCTCATTGCATACTGCATTGCCACACAGCATC
CAGCCCGACATGTCTTGCAGCTTATTGTCTCCGTAGGCCAGGTTTACGGA
GATGTGCTCTACTACGCTACGAGCATGTTCGACCTTTATTACCATGAAGT
GTCATTCTGTCGTCCGGAGGGCTACTATTTCTGGTTCTACTACGTTTTCA
TGAACTTTATCTGGCTTGCTGCTGGTTCTTGTGAGTTTATCAATACCTTG
CTGAGTGGGAACTGTGATTGCTAATCATATTGCAGATTTCGCGTACGAAA
GTGCGGTGGAGATCACGCGTGGTATGAAAAAGTTAAGCGCAATGGATCGG
AAGCGGAAGGACTGTTAG
back to top

Coding sequence (CDS) from alignment at ch5:416853..417720-

>KYF_006378-T1 ID=KYF_006378-T1|Name=KYF_006378-T1|organism=Aspergillus niger KYF3|type=CDS|length=2772bp|location=Sequence derived from alignment at ch5:416853..417720- (Aspergillus niger KYF3)
ATTTCGCGTACGAAAGTGCGGTGGAGATCACGCGTGGTATGAAAAAGTTA
AGCGCAATGGATCGGAAGCGGAAGGACTGTTAGTTTTGCTGGGGCCCGCT
CGCATTCCTCATTGCATACTGCATTGCCACACAGCATCCAGCCCGACATG
TCTTGCAGCTTATTGTCTCCGTAGGCCAGGTTTACGGAGATGTGCTCTAC
TACGCTACGAGCATGTTCGACCTTTATTACCATGAAGTGTCATTCTGTCG
TCCGGAGGGCTACTATTTCTGGTTCTACTACGTTTTCATGAACTTTATCT
GGCTTGCTGCTGGTTCTTCCGGATGCATACATCTATTTTTTGAAAGCTAC
TTCGTGGTCTACCACAAGACCCTAGCCGGCTCGCACACTTTATTCGGCCA
ACTCTGGAAGGAATATTCCCTTTCTGACTCACGCTACCTGACCTCAGATT
CATTCCTTGTGTCTATGGAAGCAGTTACCGCTATGGCTAATATGACAGAG
GCTATTCACGATTACTATCCTTCTACGATCGACTTGCCTCATTATGTAAC
TAACGAGAGTTCGACCTTTTCACTGGTCGCTCAATTTGCTGTCCTTTGGG
GTTTGGCCCTGGGTATAGCGTCCATCATCATTCGTCGTCCGCGAACACCG
GTGACTCAATCAGACCAGTTTGCATTTATCTGGATGTGCTTCAATTTCGC
GTACGAAAGTGCGGTGGAGATCACGCGTGGTATGAAAAAGTTAAGCGCAA
TGGATCGGAAGCGGAAGGACTGTTAGTTTTGCTGGGGCCCGCTCGCATTC
CTCATTGCATACTGCATTGCCACACAGCATCCAGCCCGACATGTCTTGCA
GCTTATTGTCTCCGTAGGCCAGGTTTACGGAGATGTGCTCTACTACGCTA
CGAGCATGTTCGACCTTTATTACCATGAAGTGTCATTCTGTCGTCCGGAG
GGCTACTATTTCTGGTTCTACTACGTTTTCATGAACTTTATCTGGCTTGC
TGCTGGTTCTTCCGGATGCATACATCTATTTTTTGAAAGCTACTTCGTGG
TCTACCACAAGACCCTAGCCGGCTCGCACACTTTATTCGGCCAACTCTGG
AAGGAATATTCCCTTTCTGACTCACGCTACCTGACCTCAGATTCATTCCT
TGTGTCTATGGAAGCAGTTACCGCTATGGCTAATATGACAGAGGCTATTC
ACGATTACTATCCTTCTACGATCGACTTGCCTCATTATGTAACTAACGAG
AGTTCGACCTTTTCACTGGTCGCTCAATTTGCTGTCCTTTGGGGTTTGGC
CCTGGGTATAGCGTCCATCATCATTCGTCGTCCGCGAACACCGGTGACTC
AATCAGACCAGTTTGCATTTATCTGGATGTGCTTCAATTTCGCGTACGAA
AGTGCGGTGGAGATCACGCGTGGTATGAAAAAGTTAAGCGCAATGGATCG
GAAGCGGAAGGACTGTTAGTTTTGCTGGGGCCCGCTCGCATTCCTCATTG
CATACTGCATTGCCACACAGCATCCAGCCCGACATGTCTTGCAGCTTATT
GTCTCCGTAGGCCAGGTTTACGGAGATGTGCTCTACTACGCTACGAGCAT
GTTCGACCTTTATTACCATGAAGTGTCATTCTGTCGTCCGGAGGGCTACT
ATTTCTGGTTCTACTACGTTTTCATGAACTTTATCTGGCTTGCTGCTGGT
TCTTCCGGATGCATACATCTATTTTTTGAAAGCTACTTCGTGGTCTACCA
CAAGACCCTAGCCGGCTCGCACACTTTATTCGGCCAACTCTGGAAGGAAT
ATTCCCTTTCTGACTCACGCTACCTGACCTCAGATTCATTCCTTGTGTCT
ATGGAAGCAGTTACCGCTATGGCTAATATGACAGAGGCTATTCACGATTA
CTATCCTTCTACGATCGACTTGCCTCATTATGTAACTAACGAGAGTTCGA
CCTTTTCACTGGTCGCTCAATTTGCTGTCCTTTGGGGTTTGGCCCTGGGT
ATAGCGTCCATCATCATTCGTCGTCCGCGAACACCGGTGACTCAATCAGA
CCAGTTTGCATTTATCTGGATGTGCTTCAATTTCGCGTACGAAAGTGCGG
TGGAGATCACGCGTGGTATGAAAAAGTTAAGCGCAATGGATCGGAAGCGG
AAGGACTGTTAGTTTTGCTGGGGCCCGCTCGCATTCCTCATTGCATACTG
CATTGCCACACAGCATCCAGCCCGACATGTCTTGCAGCTTATTGTCTCCG
TAGGCCAGGTTTACGGAGATGTGCTCTACTACGCTACGAGCATGTTCGAC
CTTTATTACCATGAAGTGTCATTCTGTCGTCCGGAGGGCTACTATTTCTG
GTTCTACTACGTTTTCATGAACTTTATCTGGCTTGCTGCTGGTTCTTCCG
GATGCATACATCTATTTTTTGAAAGCTACTTCGTGGTCTACCACAAGACC
CTAGCCGGCTCGCACACTTTATTCGGCCAACTCTGGAAGGAATATTCCCT
TTCTGACTCACGCTACCTGACCTCAGATTCATTCCTTGTGTCTATGGAAG
CAGTTACCGCTATGGCTAATATGACAGAGGCTATTCACGATTACTATCCT
TCTACGATCGACTTGCCTCATTATGTAACTAACGAGAGTTCGACCTTTTC
ACTGGTCGCTCAATTTGCTGTCCTTTGGGGTTTGGCCCTGGGTATAGCGT
CCATCATCATTCGTCGTCCGCGAACACCGGTGACTCAATCAGACCAGTTT
GCATTTATCTGGATGTGCTTCA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0016125sterol metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0047750cholestenol delta-isomerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_006378KYF_006378Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_006378-T1KYF_006378-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006378-T1.cdsKYF_006378-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006378-T1.exon4KYF_006378-T1.exon4Aspergillus niger KYF3exon
KYF_006378-T1.exon3KYF_006378-T1.exon3Aspergillus niger KYF3exon
KYF_006378-T1.exon2KYF_006378-T1.exon2Aspergillus niger KYF3exon
KYF_006378-T1.exon1KYF_006378-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR033118
DBxrefInterPro:IPR007905
DBxrefPFAM:PF05241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:416853..417720 -
Powered by Drupal