|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:594308..595332+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_006438-T1 ID=KYF_006438-T1|Name=KYF_006438-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1025bp|location=Sequence derived from alignment at ch5:594308..595332+ (Aspergillus niger KYF3)
ATGTCCCGATTCGGCGCAAAGAAAGGCAGAAAGCTCCCCGGAGCCGAATT
CACTTGGGAGGCAGATCCCAGCGGAGAACCTGATACGGCGCCGACGCCTT
TGTTCCCGGTATGTTTTGGGCTGATGTGATGTGATGTGATATATTTGCTT
CTTTGTCCGTTTGCTTTTGTGACACGGTATTTTCTTCGTTGCTGTTGCGT
CTACCAGCGTCGTTTACATCACCCTGTTGCTATAGCATTCTGGCTTGCTG
TTACTTCTTCTTCTACAATAAGAGAAAGGGACAGGTTCTAATCATGTCTC
TCTACAACCAGAAATACACCGTCCCCCGCGCCAGACCTCTCACCTCGCAG
GAACAATTGCAGGTGGATTTCTATCGTACTCTCCGGGAACGGTTCCACGA
TGGCCCGTATTACTCGATTCTGGAGGGGGCGGGGTCGACGATGAAGAAGG
ATAGCGCGGCGCGGGTGAACTTCGATCCGTTTCATGGCATGCCTAGTTAT
TCGGGCAAGTATCAGAAAAAGAAGAGGGCGTTGCCGAGGTTACAGGGGAG
ACAGTATGGTGAGTTTGTCCATTATTTTTCATGAACGACGTGAGAGATAT
GTGCTAATGAGATCGTCTTTGTAGTGATGAAGTTCTTCCCCCGGGAATTG
TGGCAGACAATTCAGCCGACGTTCAAGCCCGATGCCGCGATGGATGGGTA
CGTGCCGCAGGTGGCGCGGGCCGGGGTGAAGCGGGGATTCGAGGACGATG
ATGAAGAGGAAGATGAGGATGCGGCGAAGCGGGCGAAGGCTGGTGGTGAG
GAGGGTGAAGGAGCTGAGGATGATGATGACGGGGACGGGGATATCCTGGA
TCCGGAGGAGGAGCAAGAAGGGGAGGAGGAGATTGAAGATGATGACTTTG
AGGATGATGATGATGAGATGGGTGGGGATTATAACGCTGAGCAGTACTTT
GATGGTGGTGATGATGAGTATGGGGATGATGGGTTCGGAGATGGTGGTGG
TGGAGGGGAGGAGGATACTTATTAG back to topCoding sequence (CDS) from alignment at ch5:594308..595332+ >KYF_006438-T1 ID=KYF_006438-T1|Name=KYF_006438-T1|organism=Aspergillus niger KYF3|type=CDS|length=2268bp|location=Sequence derived from alignment at ch5:594308..595332+ (Aspergillus niger KYF3)
ATGTCCCGATTCGGCGCAAAGAAAGGCAGAAAGCTCCCCGGAGCCGAATT
CACTTGGGAGGCAGATCCCAGCGGAGAACCTGATACGGCGCCGACGCCTT
TGTTCCCGAAATACACCGTCCCCCGCGCCAGACCTCTCACCTCGCAGGAA
CAATTGCAGGTGGATTTCTATCGTACTCTCCGGGAACGGTTCCACGATGG
CCCGTATTACTCGATTCTGGAGGGGGCGGGGTCGACGATGAAGAAGGATA
GCGCGGCGCGGGTGAACTTCGATCCGTTTCATGGCATGCCTAGTTATTCG
GGCAAGTATCAGAAAAAGAAGAGGGCGTTGCCGAGGTTACAGGGGAGACA
GTATGTGATGAAGTTCTTCCCCCGGGAATTGTGGCAGACAATTCAGCCGA
CGTTCAAGCCCGATGCCGCGATGGATGGGTACGTGCCGCAGGTGGCGCGG
GCCGGGGTGAAGCGGGGATTCGAGGACGATGATGAAGAGGAAGATGAGGA
TGCGGCGAAGCGGGCGAAGGCTGGTGGTGAGGAGGGTGAAGGAGCTGAGG
ATGATGATGACGGGGACGGGGATATCCTGGATCCGGAGGAGGAGCAAGAA
GGGGAGGAGGAGATTGAAGATGATGACTTTGAGGATGATGATGATGAGAT
GGGTGGGGATTATAACGCTGAGCAGTACTTTGATGGTGGTGATGATGAGT
ATGGGGATGATGGGTTCGGAGATGGTGGTGGTGGAGGGGAGGAGGATACT
TATTAGATGTCCCGATTCGGCGCAAAGAAAGGCAGAAAGCTCCCCGGAGC
CGAATTCACTTGGGAGGCAGATCCCAGCGGAGAACCTGATACGGCGCCGA
CGCCTTTGTTCCCGAAATACACCGTCCCCCGCGCCAGACCTCTCACCTCG
CAGGAACAATTGCAGGTGGATTTCTATCGTACTCTCCGGGAACGGTTCCA
CGATGGCCCGTATTACTCGATTCTGGAGGGGGCGGGGTCGACGATGAAGA
AGGATAGCGCGGCGCGGGTGAACTTCGATCCGTTTCATGGCATGCCTAGT
TATTCGGGCAAGTATCAGAAAAAGAAGAGGGCGTTGCCGAGGTTACAGGG
GAGACAGTATGTGATGAAGTTCTTCCCCCGGGAATTGTGGCAGACAATTC
AGCCGACGTTCAAGCCCGATGCCGCGATGGATGGGTACGTGCCGCAGGTG
GCGCGGGCCGGGGTGAAGCGGGGATTCGAGGACGATGATGAAGAGGAAGA
TGAGGATGCGGCGAAGCGGGCGAAGGCTGGTGGTGAGGAGGGTGAAGGAG
CTGAGGATGATGATGACGGGGACGGGGATATCCTGGATCCGGAGGAGGAG
CAAGAAGGGGAGGAGGAGATTGAAGATGATGACTTTGAGGATGATGATGA
TGAGATGGGTGGGGATTATAACGCTGAGCAGTACTTTGATGGTGGTGATG
ATGAGTATGGGGATGATGGGTTCGGAGATGGTGGTGGTGGAGGGGAGGAG
GATACTTATTAGATGTCCCGATTCGGCGCAAAGAAAGGCAGAAAGCTCCC
CGGAGCCGAATTCACTTGGGAGGCAGATCCCAGCGGAGAACCTGATACGG
CGCCGACGCCTTTGTTCCCGAAATACACCGTCCCCCGCGCCAGACCTCTC
ACCTCGCAGGAACAATTGCAGGTGGATTTCTATCGTACTCTCCGGGAACG
GTTCCACGATGGCCCGTATTACTCGATTCTGGAGGGGGCGGGGTCGACGA
TGAAGAAGGATAGCGCGGCGCGGGTGAACTTCGATCCGTTTCATGGCATG
CCTAGTTATTCGGGCAAGTATCAGAAAAAGAAGAGGGCGTTGCCGAGGTT
ACAGGGGAGACAGTATGTGATGAAGTTCTTCCCCCGGGAATTGTGGCAGA
CAATTCAGCCGACGTTCAAGCCCGATGCCGCGATGGATGGGTACGTGCCG
CAGGTGGCGCGGGCCGGGGTGAAGCGGGGATTCGAGGACGATGATGAAGA
GGAAGATGAGGATGCGGCGAAGCGGGCGAAGGCTGGTGGTGAGGAGGGTG
AAGGAGCTGAGGATGATGATGACGGGGACGGGGATATCCTGGATCCGGAG
GAGGAGCAAGAAGGGGAGGAGGAGATTGAAGATGATGACTTTGAGGATGA
TGATGATGAGATGGGTGGGGATTATAACGCTGAGCAGTACTTTGATGGTG
GTGATGATGAGTATGGGGATGATGGGTTCGGAGATGGTGGTGGTGGAGGG
GAGGAGGATACTTATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006383 | transcription by RNA polymerase III |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003899 | DNA-directed 5'-3' RNA polymerase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR024661 |
| DBxref | PFAM:PF11705 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:594308..595332 + |
|
