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KYF_006451-T1, KYF_006451-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_006451-T1
Unique NameKYF_006451-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:626930..628156+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_006451-T1 ID=KYF_006451-T1|Name=KYF_006451-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1227bp|location=Sequence derived from alignment at ch5:626930..628156+ (Aspergillus niger KYF3)
ATGGCTGAAGCAACACACCCAACTGAAACAGTAACCCCTCCTACGGAGGA
TGTTGTCGAAGATCAACAACAAACCCAGCAACAAGAAAACGAAACAACAG
AAGAAACCACCGCCCTAACAACCACCGCCGACGGCGCCGTCGAACCGCAA
AAGAAGACCAAAAAGATAATCCGACGCAAGCGCCGTCCAGCACGCCCACA
AGTCGACCCTGCGACAATCAAATCCGAACCTCCACCCCAAGTCGGCACAA
TCTTCAACATCTGGTACAACAAATGGAGCGGCGGTGACCGCGAAAACTCC
TACCTGAGCAAGACGGCAGCACCCTCACGATGCAACATCGCGCGCGACAG
CGGCTACACACGGGCCGACAAAGTGCCCGGGTCATACTTCTGCCTGTTCT
TCGCGCGCGGGATATGCCCGCGCGGCGCAGAGTGCGAGTACCTGCACCGT
TTACCAACACTGCACGACATATTTAATCCGAACGTGGATTGCTTTGGACG
GGACAAGTTCAGTGATTATCGGGATGATATGGGCGGTGTAGGATCGTTCA
TGAGACAGAATCGCACATTGTATGTGGGACGGATTCATGTGACGGATTCG
ATTGAGGAGGTGGTGGCGAGGAATTTCCAGGAATGGGGACAGATTGATCG
GATTCGGGTGCTTACGTCTCGGGGCGTTGCGTTTGTGACGTATACGAATG
AGGCGAATGCGCAATTTGCGAAAGAGGCGATGGCGCATCAAAGTTTGGAT
CATAATGAGATTCTGAATGTGAGGTGGGCTACGGTCGATCCGAATCCGTT
GGCGCAGAAGAGGGAGGCGAGACGGCTGGAAGAGCAGGCTGCTGAGGCGG
TAAGGAGGGCGTTGCCGGCGGAGTTTGTGGCTGAGTTGGAGGGTAGGGAT
CCTGAGGCCAAGAAGAGGAAGAAGATTGAGGGGAGTTATGGGTTGCAGGG
GTATGAGCCGCCGGATGAGGTGTGGTTCTCGCGTGCGAAGGAGTTGGAGG
ATGCGAATGCGATTGCGCAATTGGAGGCTCCAGAGCAGCCGCTGATGATT
GAGGGTGCCTCTGAAACTGCTGCTGCTGCTCCACAGGAGGAACAGGCCGG
AGGGATCTTCTCCAGCTCTGCTGTTGCGGCGTTGAAGGGCCTGGCTGGCG
GTGCTGTCACGACGCAGCAGGCGCCTAAAGCTGCTAGACCTCTGGTGGCG
TACGGGAGTGACGATGATAGCGAGTAA
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Coding sequence (CDS) from alignment at ch5:626930..628156+

>KYF_006451-T1 ID=KYF_006451-T1|Name=KYF_006451-T1|organism=Aspergillus niger KYF3|type=CDS|length=1227bp|location=Sequence derived from alignment at ch5:626930..628156+ (Aspergillus niger KYF3)
ATGGCTGAAGCAACACACCCAACTGAAACAGTAACCCCTCCTACGGAGGA
TGTTGTCGAAGATCAACAACAAACCCAGCAACAAGAAAACGAAACAACAG
AAGAAACCACCGCCCTAACAACCACCGCCGACGGCGCCGTCGAACCGCAA
AAGAAGACCAAAAAGATAATCCGACGCAAGCGCCGTCCAGCACGCCCACA
AGTCGACCCTGCGACAATCAAATCCGAACCTCCACCCCAAGTCGGCACAA
TCTTCAACATCTGGTACAACAAATGGAGCGGCGGTGACCGCGAAAACTCC
TACCTGAGCAAGACGGCAGCACCCTCACGATGCAACATCGCGCGCGACAG
CGGCTACACACGGGCCGACAAAGTGCCCGGGTCATACTTCTGCCTGTTCT
TCGCGCGCGGGATATGCCCGCGCGGCGCAGAGTGCGAGTACCTGCACCGT
TTACCAACACTGCACGACATATTTAATCCGAACGTGGATTGCTTTGGACG
GGACAAGTTCAGTGATTATCGGGATGATATGGGCGGTGTAGGATCGTTCA
TGAGACAGAATCGCACATTGTATGTGGGACGGATTCATGTGACGGATTCG
ATTGAGGAGGTGGTGGCGAGGAATTTCCAGGAATGGGGACAGATTGATCG
GATTCGGGTGCTTACGTCTCGGGGCGTTGCGTTTGTGACGTATACGAATG
AGGCGAATGCGCAATTTGCGAAAGAGGCGATGGCGCATCAAAGTTTGGAT
CATAATGAGATTCTGAATGTGAGGTGGGCTACGGTCGATCCGAATCCGTT
GGCGCAGAAGAGGGAGGCGAGACGGCTGGAAGAGCAGGCTGCTGAGGCGG
TAAGGAGGGCGTTGCCGGCGGAGTTTGTGGCTGAGTTGGAGGGTAGGGAT
CCTGAGGCCAAGAAGAGGAAGAAGATTGAGGGGAGTTATGGGTTGCAGGG
GTATGAGCCGCCGGATGAGGTGTGGTTCTCGCGTGCGAAGGAGTTGGAGG
ATGCGAATGCGATTGCGCAATTGGAGGCTCCAGAGCAGCCGCTGATGATT
GAGGGTGCCTCTGAAACTGCTGCTGCTGCTCCACAGGAGGAACAGGCCGG
AGGGATCTTCTCCAGCTCTGCTGTTGCGGCGTTGAAGGGCCTGGCTGGCG
GTGCTGTCACGACGCAGCAGGCGCCTAAAGCTGCTAGACCTCTGGTGGCG
TACGGGAGTGACGATGATAGCGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0046872metal ion binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CWC2KYF_006451Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006451-T1.exon1KYF_006451-T1.exon1Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006451-T1.cdsKYF_006451-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_006451-T1KYF_006451-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036855
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034181
DBxrefInterPro:IPR000571
DBxrefInterPro:IPR032297
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00642
DBxrefPFAM:PF16131
DBxrefPFAM:PF00076
ProductPre-mRNA-splicing factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:626930..628156 +
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