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KYF_006488-T1, KYF_006488-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_006488-T1
Unique NameKYF_006488-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:748124..749125+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_006488-T1 ID=KYF_006488-T1|Name=KYF_006488-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1002bp|location=Sequence derived from alignment at ch5:748124..749125+ (Aspergillus niger KYF3)
ATGGGTCGCGTGATCCGCAACCAGAGGAAGGGTCGTGGATCCATTTTCAG
TGAGTGCGACCGCAGAGATCCTGAAGCGAAATTCGCAGCATCTCCAGATC
AATTTTTACTGATACAATTTTTCGCTCGACAGCGGCAAACACCCGTCTCA
ACAAGGCTCCTGCCCAGTTCCGCACCCTCGACTACGCCGAGCGTCATGGA
TACACTCGTGGTGTCGTGAAGGAGATCATCCACGACCCCGGCCGTGGTGC
TCCCCTCGCCAAGGTCCAGTTCCGTCACCCCTACAAGTTCAAGACCATCA
CCGAGACCTTCATCGCCAACGAGGGCATGTACACCGGTCAATTCGTCTAC
GCCGGAAAGAACGCCGCCCTGACTGTCGGAAACGTCCTTCCCCTCGCCTC
CGTCCCTGAGGGTACCGTTGTGACCAACGTCGAGGAGAAGGCTGGTGACC
GTGGTGCTCTTGGTCGTACCTCCGGTAACTACGTTACCGTCATCGGCCAC
AACCCCGAGGAGGGCAAGACCCGTGTCAAGCTCCCCTCCGGTGCCAAGAA
GGTCGTCAAGAACACCGCCCGTGGTATGATCGGTATCGTCGCTGGTGGTG
GTCGTACCGACAAGCCTTTGCTGAGTATGTCTCCGGAAATCTGGCTCCGT
TGAATCACTTTTCGGAGAGAATGCGGTTAAAGAAGAGGACTTTGATGGCT
AATTCATTCCCTACAGAGGCTTCTCGCGCCAAGCACAAGTTCGCTGTCAA
GCGCAACTCTTGGCCCAAGACCCGTGGTGTTGCCATGAACCCCGTGGATC
ACGTAAGGCTCCCTCCAATGATTTGGTCGATTTATCTACAGATTCTGACA
TGTTTTCTCTACAGCCTCACGGTGGTGGTAACCACCAGCACATTGGTAAG
GCCTCGACCATCTCCCGCTACGCTGCCCAGGGTCAAAAAGCCGGTCTTAT
CGCTGCCCGGAGAACTGGTCTGCTCCGTGGTACCCAGAAGACCAAGGAGT
AA
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Coding sequence (CDS) from alignment at ch5:748124..749125+

>KYF_006488-T1 ID=KYF_006488-T1|Name=KYF_006488-T1|organism=Aspergillus niger KYF3|type=CDS|length=3060bp|location=Sequence derived from alignment at ch5:748124..749125+ (Aspergillus niger KYF3)
ATGGGTCGCGTGATCCGCAACCAGAGGAAGGGTCGTGGATCCATTTTCAC
GGCAAACACCCGTCTCAACAAGGCTCCTGCCCAGTTCCGCACCCTCGACT
ACGCCGAGCGTCATGGATACACTCGTGGTGTCGTGAAGGAGATCATCCAC
GACCCCGGCCGTGGTGCTCCCCTCGCCAAGGTCCAGTTCCGTCACCCCTA
CAAGTTCAAGACCATCACCGAGACCTTCATCGCCAACGAGGGCATGTACA
CCGGTCAATTCGTCTACGCCGGAAAGAACGCCGCCCTGACTGTCGGAAAC
GTCCTTCCCCTCGCCTCCGTCCCTGAGGGTACCGTTGTGACCAACGTCGA
GGAGAAGGCTGGTGACCGTGGTGCTCTTGGTCGTACCTCCGGTAACTACG
TTACCGTCATCGGCCACAACCCCGAGGAGGGCAAGACCCGTGTCAAGCTC
CCCTCCGGTGCCAAGAAGGTCGTCAAGAACACCGCCCGTGGTATGATCGG
TATCGTCGCTGGTGGTGGTCGTACCGACAAGCCTTTGCTGAAGGCTTCTC
GCGCCAAGCACAAGTTCGCTGTCAAGCGCAACTCTTGGCCCAAGACCCGT
GGTGTTGCCATGAACCCCGTGGATCACCCTCACGGTGGTGGTAACCACCA
GCACATTGGTAAGGCCTCGACCATCTCCCGCTACGCTGCCCAGGGTCAAA
AAGCCGGTCTTATCGCTGCCCGGAGAACTGGTCTGCTCCGTGGTACCCAG
AAGACCAAGGAGTAAATGGGTCGCGTGATCCGCAACCAGAGGAAGGGTCG
TGGATCCATTTTCACGGCAAACACCCGTCTCAACAAGGCTCCTGCCCAGT
TCCGCACCCTCGACTACGCCGAGCGTCATGGATACACTCGTGGTGTCGTG
AAGGAGATCATCCACGACCCCGGCCGTGGTGCTCCCCTCGCCAAGGTCCA
GTTCCGTCACCCCTACAAGTTCAAGACCATCACCGAGACCTTCATCGCCA
ACGAGGGCATGTACACCGGTCAATTCGTCTACGCCGGAAAGAACGCCGCC
CTGACTGTCGGAAACGTCCTTCCCCTCGCCTCCGTCCCTGAGGGTACCGT
TGTGACCAACGTCGAGGAGAAGGCTGGTGACCGTGGTGCTCTTGGTCGTA
CCTCCGGTAACTACGTTACCGTCATCGGCCACAACCCCGAGGAGGGCAAG
ACCCGTGTCAAGCTCCCCTCCGGTGCCAAGAAGGTCGTCAAGAACACCGC
CCGTGGTATGATCGGTATCGTCGCTGGTGGTGGTCGTACCGACAAGCCTT
TGCTGAAGGCTTCTCGCGCCAAGCACAAGTTCGCTGTCAAGCGCAACTCT
TGGCCCAAGACCCGTGGTGTTGCCATGAACCCCGTGGATCACCCTCACGG
TGGTGGTAACCACCAGCACATTGGTAAGGCCTCGACCATCTCCCGCTACG
CTGCCCAGGGTCAAAAAGCCGGTCTTATCGCTGCCCGGAGAACTGGTCTG
CTCCGTGGTACCCAGAAGACCAAGGAGTAAATGGGTCGCGTGATCCGCAA
CCAGAGGAAGGGTCGTGGATCCATTTTCACGGCAAACACCCGTCTCAACA
AGGCTCCTGCCCAGTTCCGCACCCTCGACTACGCCGAGCGTCATGGATAC
ACTCGTGGTGTCGTGAAGGAGATCATCCACGACCCCGGCCGTGGTGCTCC
CCTCGCCAAGGTCCAGTTCCGTCACCCCTACAAGTTCAAGACCATCACCG
AGACCTTCATCGCCAACGAGGGCATGTACACCGGTCAATTCGTCTACGCC
GGAAAGAACGCCGCCCTGACTGTCGGAAACGTCCTTCCCCTCGCCTCCGT
CCCTGAGGGTACCGTTGTGACCAACGTCGAGGAGAAGGCTGGTGACCGTG
GTGCTCTTGGTCGTACCTCCGGTAACTACGTTACCGTCATCGGCCACAAC
CCCGAGGAGGGCAAGACCCGTGTCAAGCTCCCCTCCGGTGCCAAGAAGGT
CGTCAAGAACACCGCCCGTGGTATGATCGGTATCGTCGCTGGTGGTGGTC
GTACCGACAAGCCTTTGCTGAAGGCTTCTCGCGCCAAGCACAAGTTCGCT
GTCAAGCGCAACTCTTGGCCCAAGACCCGTGGTGTTGCCATGAACCCCGT
GGATCACCCTCACGGTGGTGGTAACCACCAGCACATTGGTAAGGCCTCGA
CCATCTCCCGCTACGCTGCCCAGGGTCAAAAAGCCGGTCTTATCGCTGCC
CGGAGAACTGGTCTGCTCCGTGGTACCCAGAAGACCAAGGAGTAAATGGG
TCGCGTGATCCGCAACCAGAGGAAGGGTCGTGGATCCATTTTCACGGCAA
ACACCCGTCTCAACAAGGCTCCTGCCCAGTTCCGCACCCTCGACTACGCC
GAGCGTCATGGATACACTCGTGGTGTCGTGAAGGAGATCATCCACGACCC
CGGCCGTGGTGCTCCCCTCGCCAAGGTCCAGTTCCGTCACCCCTACAAGT
TCAAGACCATCACCGAGACCTTCATCGCCAACGAGGGCATGTACACCGGT
CAATTCGTCTACGCCGGAAAGAACGCCGCCCTGACTGTCGGAAACGTCCT
TCCCCTCGCCTCCGTCCCTGAGGGTACCGTTGTGACCAACGTCGAGGAGA
AGGCTGGTGACCGTGGTGCTCTTGGTCGTACCTCCGGTAACTACGTTACC
GTCATCGGCCACAACCCCGAGGAGGGCAAGACCCGTGTCAAGCTCCCCTC
CGGTGCCAAGAAGGTCGTCAAGAACACCGCCCGTGGTATGATCGGTATCG
TCGCTGGTGGTGGTCGTACCGACAAGCCTTTGCTGAAGGCTTCTCGCGCC
AAGCACAAGTTCGCTGTCAAGCGCAACTCTTGGCCCAAGACCCGTGGTGT
TGCCATGAACCCCGTGGATCACCCTCACGGTGGTGGTAACCACCAGCACA
TTGGTAAGGCCTCGACCATCTCCCGCTACGCTGCCCAGGGTCAAAAAGCC
GGTCTTATCGCTGCCCGGAGAACTGGTCTGCTCCGTGGTACCCAGAAGAC
CAAGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL2KYF_006488Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006488-T1.exon1KYF_006488-T1.exon1Aspergillus niger KYF3exon
KYF_006488-T1.exon2KYF_006488-T1.exon2Aspergillus niger KYF3exon
KYF_006488-T1.exon3KYF_006488-T1.exon3Aspergillus niger KYF3exon
KYF_006488-T1.exon4KYF_006488-T1.exon4Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006488-T1.cdsKYF_006488-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_006488-T1KYF_006488-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR022671
DBxrefInterPro:IPR014722
DBxrefInterPro:IPR022666
DBxrefInterPro:IPR014726
DBxrefInterPro:IPR002171
DBxrefInterPro:IPR022669
DBxrefPFAM:PF03947
DBxrefPFAM:PF00181
Product60S ribosomal protein L2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:748124..749125 +
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