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KYF_006492-T1, KYF_006492-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_006492-T1
Unique NameKYF_006492-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:763403..764534+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_006492-T1 ID=KYF_006492-T1|Name=KYF_006492-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1132bp|location=Sequence derived from alignment at ch5:763403..764534+ (Aspergillus niger KYF3)
ATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACAA
GGAGGTAAGTCGTGTGTGCGTTTTCTGGTTTTGTGTCCTATTCCTCCTCC
CTGTCTCCCCCCAATCGGTTTGCGAAAGGGGTTTCCTTTCTACCTGCATT
GTATCTGCTCGTTTATTCCTGTCTTACAATGTTTATTCATCACGGATTGG
AATCGTCGGAGAGCTGGAGGATGGGATGAAGTCGTGTTGTTGTTCTCCGA
TTTCTGCCTACTTGCATATTTCTCAGCCGCCAGTTTCGAAGCTAAACTAA
CCATCTCCTCTTCACACTTTAGCTCTCCAAGTACCCTGTCCTCAACAACT
TGGAGCGCCAGACCTCCGTCCCCAAGGTCTACGTGATCCTGGGCCTGGTC
GGCGTCTACTTCTTCTTGGTCTTCTTCAACATCGCCGGTGAATTCCTCGT
CAACCTCGCTGGTTTCCTCATCCCTGGTTACTACTCCCTGAACGCTCTGT
TCACCGCCGGAAAGGCCGACGACACACAGGTATGCTCCATCTCTTTATTC
CCTACTGTTTTCTTAGATGATAATTGTGCTGATGATCGTGACCCTGCGTT
TAGTGGTTGACGGTATGTTTCTCGTGATCCCCGTTATCGCGACATGACTC
GGGCGTTTCATACGCCTAGGTTATCTTTCTGCACGTGACGACGTGCGCTC
GTCAGCTAGCGGTTATACTGATTGGCATGTGATTCTTCTAGTACTGGGTT
GTTTACGCCTTCTTCACCGTCATTGAGAGCGCCATCTCTGCCCCCTACTG
GTTCCGTAAGTATTCGCAACGTTTGATGTGATTCCTACAGTGGAAAGTAC
ATAAACTGATCGCGACGCTTCAACACAGCCTTCTACTACATCTTCAAGTT
CGCCCTTGTCCTCTGGATGTCTCTTCCCCAGACCAAGTAAGCTATCCACT
TCCCGCAGCTCCGAAACCCATTATTATTATCATCACCAGAACTCCGACTG
ACCCTCTTCTCCAGCGGTGCTCAAGTGGTCTTCCACTCCTTCATCCAGCC
CGTGCTCGGCCGCTTCTTCCAGGGCGGTTCCACTTCGGCCAACCTCCGCG
CCCAGGCCGAGGCTGCTGCTAAGGACCAGTAA
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Coding sequence (CDS) from alignment at ch5:763403..764534+

>KYF_006492-T1 ID=KYF_006492-T1|Name=KYF_006492-T1|organism=Aspergillus niger KYF3|type=CDS|length=2505bp|location=Sequence derived from alignment at ch5:763403..764534+ (Aspergillus niger KYF3)
ATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACAA
GGAGCTCTCCAAGTACCCTGTCCTCAACAACTTGGAGCGCCAGACCTCCG
TCCCCAAGGTCTACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTTCTTG
GTCTTCTTCAACATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTTTCCT
CATCCCTGGTTACTACTCCCTGAACGCTCTGTTCACCGCCGGAAAGGCCG
ACGACACACAGTACTGGGTTGTTTACGCCTTCTTCACCGTCATTGAGAGC
GCCATCTCTGCCCCCTACTGGTTCCCCTTCTACTACATCTTCAAGTTCGC
CCTTGTCCTCTGGATGTCTCTTCCCCAGACCAACGGTGCTCAAGTGGTCT
TCCACTCCTTCATCCAGCCCGTGCTCGGCCGCTTCTTCCAGGGCGGTTCC
ACTTCGGCCAACCTCCGCGCCCAGGCCGAGGCTGCTGCTAAGGACCAGTA
AATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACA
AGGAGCTCTCCAAGTACCCTGTCCTCAACAACTTGGAGCGCCAGACCTCC
GTCCCCAAGGTCTACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTTCTT
GGTCTTCTTCAACATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTTTCC
TCATCCCTGGTTACTACTCCCTGAACGCTCTGTTCACCGCCGGAAAGGCC
GACGACACACAGTACTGGGTTGTTTACGCCTTCTTCACCGTCATTGAGAG
CGCCATCTCTGCCCCCTACTGGTTCCCCTTCTACTACATCTTCAAGTTCG
CCCTTGTCCTCTGGATGTCTCTTCCCCAGACCAACGGTGCTCAAGTGGTC
TTCCACTCCTTCATCCAGCCCGTGCTCGGCCGCTTCTTCCAGGGCGGTTC
CACTTCGGCCAACCTCCGCGCCCAGGCCGAGGCTGCTGCTAAGGACCAGT
AAATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGAC
AAGGAGCTCTCCAAGTACCCTGTCCTCAACAACTTGGAGCGCCAGACCTC
CGTCCCCAAGGTCTACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTTCT
TGGTCTTCTTCAACATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTTTC
CTCATCCCTGGTTACTACTCCCTGAACGCTCTGTTCACCGCCGGAAAGGC
CGACGACACACAGTACTGGGTTGTTTACGCCTTCTTCACCGTCATTGAGA
GCGCCATCTCTGCCCCCTACTGGTTCCCCTTCTACTACATCTTCAAGTTC
GCCCTTGTCCTCTGGATGTCTCTTCCCCAGACCAACGGTGCTCAAGTGGT
CTTCCACTCCTTCATCCAGCCCGTGCTCGGCCGCTTCTTCCAGGGCGGTT
CCACTTCGGCCAACCTCCGCGCCCAGGCCGAGGCTGCTGCTAAGGACCAG
TAAATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGA
CAAGGAGCTCTCCAAGTACCCTGTCCTCAACAACTTGGAGCGCCAGACCT
CCGTCCCCAAGGTCTACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTTC
TTGGTCTTCTTCAACATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTTT
CCTCATCCCTGGTTACTACTCCCTGAACGCTCTGTTCACCGCCGGAAAGG
CCGACGACACACAGTACTGGGTTGTTTACGCCTTCTTCACCGTCATTGAG
AGCGCCATCTCTGCCCCCTACTGGTTCCCCTTCTACTACATCTTCAAGTT
CGCCCTTGTCCTCTGGATGTCTCTTCCCCAGACCAACGGTGCTCAAGTGG
TCTTCCACTCCTTCATCCAGCCCGTGCTCGGCCGCTTCTTCCAGGGCGGT
TCCACTTCGGCCAACCTCCGCGCCCAGGCCGAGGCTGCTGCTAAGGACCA
GTAAATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCG
ACAAGGAGCTCTCCAAGTACCCTGTCCTCAACAACTTGGAGCGCCAGACC
TCCGTCCCCAAGGTCTACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTT
CTTGGTCTTCTTCAACATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTT
TCCTCATCCCTGGTTACTACTCCCTGAACGCTCTGTTCACCGCCGGAAAG
GCCGACGACACACAGTACTGGGTTGTTTACGCCTTCTTCACCGTCATTGA
GAGCGCCATCTCTGCCCCCTACTGGTTCCCCTTCTACTACATCTTCAAGT
TCGCCCTTGTCCTCTGGATGTCTCTTCCCCAGACCAACGGTGCTCAAGTG
GTCTTCCACTCCTTCATCCAGCCCGTGCTCGGCCGCTTCTTCCAGGGCGG
TTCCACTTCGGCCAACCTCCGCGCCCAGGCCGAGGCTGCTGCTAAGGACC
AGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YOP1KYF_006492Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_006492-T1KYF_006492-T1-proteinAspergillus niger KYF3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006492-T1.exon1KYF_006492-T1.exon1Aspergillus niger KYF3exon
KYF_006492-T1.exon2KYF_006492-T1.exon2Aspergillus niger KYF3exon
KYF_006492-T1.exon3KYF_006492-T1.exon3Aspergillus niger KYF3exon
KYF_006492-T1.exon4KYF_006492-T1.exon4Aspergillus niger KYF3exon
KYF_006492-T1.exon5KYF_006492-T1.exon5Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006492-T1.cdsKYF_006492-T1.cdsAspergillus niger KYF3CDS


Properties
Property NameValue
NoteBUSCO:EOG09264USX
DBxrefInterPro:IPR004345
DBxrefPFAM:PF03134
ProductER membrane protein DP1/Yop1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:763403..764534 +
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