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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:971108..972796- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_006551-T1 ID=KYF_006551-T1|Name=KYF_006551-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1689bp|location=Sequence derived from alignment at ch5:971108..972796- (Aspergillus niger KYF3)
ATGGCGGTCGCAGTGGCTAAGGAGGAGATGGACTACTCAATCAAGCCTGA
GGCTAGTGCCTCGAAAATCGACACGTCGGAGTGGCCGCTTCTTCTGAAGA
ATTATGACAAGCGTACGTTCACTTCAAATCCACATCTCATATCAATGTAG
CTGGTGCTGATTTATAATATCAGTGCTTGTCAGGACCGGCCACTTCACGC
CAATTCCCGCTGGTAGCACTCCTCTGAAGCGTGACCTGAAGTCGTACATC
AACTCCGGTGTCATCAACCTGGACAAGCCTTCAAACCCCTCCAGTCATGA
GGTTGTTGCTTGGATGAAGAGAATCCTGAGGTAAATCTTCTATTACGTTC
TCCTCTTGTCTTCACGATACTGAGACTAGTTTTGTAAAGGGCGGAGAAGA
CTGGTCACAGCGGAACCCTCGACCCCAAGGTCACCGGTTGCTTGATTGTC
TGCATTGACCGTGCTACTCGCCTGGTGAAATCCCAACAGGGTGCCGGAAA
GGAATACGTTTGCGTGATCCGCCTACATGATAAGATCCCCGGTGGCGAGG
CTCAGTTTAAGCGGGCTCTTGAGACCTTGACTGGAGCCCTTTTCCAGCGG
CCGCCATTGATCTCTGCTGTTAAGCGTCAGCTTCGTATCCGGACAATTCA
CGAAAGCAAGCTTTACGAGTTCGATAATGAGAGGCATCTTGGTGTCTTCT
GGGTCAGCTGTGAAGCCGGAACGTACATCAGAACCCTTTGTGTCCACTTG
GGTCTTTTGCTCGGTGTTGGTGCGCACATGCAGGAACTTCGCCGTGTTCG
CAGTGGTGCCATGGATGAGAACAGTGGAATGGTGACTCTACACGACGTTT
TGGACGCCCAATGGATGTACGACAACCAGCGGGACGAGTCTTATTTGAGG
AAGGTCATCAAACCTCTGGAGACTCTTCTCACCACGTACAAGCGTATCGT
TGTCAAAGACAGTGCTGTTAACGCTGTATGCTATGGTGCTAAGCTTATGG
TCCCTGGTCTCCTCCGCTTCGGTAAGATCTTGTCTTCTCCATATGGTTCG
AATTGAATTGCTGACTCTGGTGAAGAGGCTGGTATTGAGGTCAACGAAGA
GGTAGTTCTCATGACCACTAAGGGTGAGGCTATTGCCATCGGTATCGCTC
AAATGTCGACCGTTGAGCTGTCCACCTGCGATCACGGCGTTGTGGCCAAG
GTCAAGCGTTGTATCATGGAACGCGACCTGTACCCGCGTCGCTGGGGTTT
GGGGCCTGTGGCTTTGGAGAAGAAGAAGCTCAAGTCCGCCGGAAAACTGG
ATGTAAGCTATCCTATGGAATACTCACATATGTTCTGGCTTTGCTGACAA
ATAATGCAGAAATACGGTCGTGCTAACGAGGCTACGCCTGCTAAATGGAA
GAACGACTACAAGGATTACAGCGCACCCGAAGAAGAAGGCGCACAGGCAG
TGGCTCAACCTGTTGCTCAAGAAGAAACCGCTACTCCTGCTGAGCAAACC
GAAACCCCTTCTTCTCCCAACAAGATGGATGTTGATGACGACGACGACGA
GAAGAAGAAGCGCAAGCGCCACGAAGGTGAGACGCCCGAGGAACGGGCCG
AGCGCAAGCGCAAGAAGAAGGAGAAGAAGGAAAAGAAGGAGCGCCGGAAG
TCCAAGCAGGAGAAGGAAGAGAGCGACGATAGTGATTAA back to topCoding sequence (CDS) from alignment at ch5:971108..972796- >KYF_006551-T1 ID=KYF_006551-T1|Name=KYF_006551-T1|organism=Aspergillus niger KYF3|type=CDS|length=7290bp|location=Sequence derived from alignment at ch5:971108..972796- (Aspergillus niger KYF3)
AAATACGGTCGTGCTAACGAGGCTACGCCTGCTAAATGGAAGAACGACTA
CAAGGATTACAGCGCACCCGAAGAAGAAGGCGCACAGGCAGTGGCTCAAC
CTGTTGCTCAAGAAGAAACCGCTACTCCTGCTGAGCAAACCGAAACCCCT
TCTTCTCCCAACAAGATGGATGTTGATGACGACGACGACGAGAAGAAGAA
GCGCAAGCGCCACGAAGGTGAGACGCCCGAGGAACGGGCCGAGCGCAAGC
GCAAGAAGAAGGAGAAGAAGGAAAAGAAGGAGCGCCGGAAGTCCAAGCAG
GAGAAGGAAGAGAGCGACGATAGTGATTAAAGGCTGGTATTGAGGTCAAC
GAAGAGGTAGTTCTCATGACCACTAAGGGTGAGGCTATTGCCATCGGTAT
CGCTCAAATGTCGACCGTTGAGCTGTCCACCTGCGATCACGGCGTTGTGG
CCAAGGTCAAGCGTTGTATCATGGAACGCGACCTGTACCCGCGTCGCTGG
GGTTTGGGGCCTGTGGCTTTGGAGAAGAAGAAGCTCAAGTCCGCCGGAAA
ACTGGATGGCGGAGAAGACTGGTCACAGCGGAACCCTCGACCCCAAGGTC
ACCGGTTGCTTGATTGTCTGCATTGACCGTGCTACTCGCCTGGTGAAATC
CCAACAGGGTGCCGGAAAGGAATACGTTTGCGTGATCCGCCTACATGATA
AGATCCCCGGTGGCGAGGCTCAGTTTAAGCGGGCTCTTGAGACCTTGACT
GGAGCCCTTTTCCAGCGGCCGCCATTGATCTCTGCTGTTAAGCGTCAGCT
TCGTATCCGGACAATTCACGAAAGCAAGCTTTACGAGTTCGATAATGAGA
GGCATCTTGGTGTCTTCTGGGTCAGCTGTGAAGCCGGAACGTACATCAGA
ACCCTTTGTGTCCACTTGGGTCTTTTGCTCGGTGTTGGTGCGCACATGCA
GGAACTTCGCCGTGTTCGCAGTGGTGCCATGGATGAGAACAGTGGAATGG
TGACTCTACACGACGTTTTGGACGCCCAATGGATGTACGACAACCAGCGG
GACGAGTCTTATTTGAGGAAGGTCATCAAACCTCTGGAGACTCTTCTCAC
CACGTACAAGCGTATCGTTGTCAAAGACAGTGCTGTTAACGCTGTATGCT
ATGGTGCTAAGCTTATGGTCCCTGGTCTCCTCCGCTTCGTGCTTGTCAGG
ACCGGCCACTTCACGCCAATTCCCGCTGGTAGCACTCCTCTGAAGCGTGA
CCTGAAGTCGTACATCAACTCCGGTGTCATCAACCTGGACAAGCCTTCAA
ACCCCTCCAGTCATGAGGTTGTTGCTTGGATGAAGAGAATCCTGAGATGG
CGGTCGCAGTGGCTAAGGAGGAGATGGACTACTCAATCAAGCCTGAGGCT
AGTGCCTCGAAAATCGACACGTCGGAGTGGCCGCTTCTTCTGAAGAATTA
TGACAAGCAAATACGGTCGTGCTAACGAGGCTACGCCTGCTAAATGGAAG
AACGACTACAAGGATTACAGCGCACCCGAAGAAGAAGGCGCACAGGCAGT
GGCTCAACCTGTTGCTCAAGAAGAAACCGCTACTCCTGCTGAGCAAACCG
AAACCCCTTCTTCTCCCAACAAGATGGATGTTGATGACGACGACGACGAG
AAGAAGAAGCGCAAGCGCCACGAAGGTGAGACGCCCGAGGAACGGGCCGA
GCGCAAGCGCAAGAAGAAGGAGAAGAAGGAAAAGAAGGAGCGCCGGAAGT
CCAAGCAGGAGAAGGAAGAGAGCGACGATAGTGATTAAAGGCTGGTATTG
AGGTCAACGAAGAGGTAGTTCTCATGACCACTAAGGGTGAGGCTATTGCC
ATCGGTATCGCTCAAATGTCGACCGTTGAGCTGTCCACCTGCGATCACGG
CGTTGTGGCCAAGGTCAAGCGTTGTATCATGGAACGCGACCTGTACCCGC
GTCGCTGGGGTTTGGGGCCTGTGGCTTTGGAGAAGAAGAAGCTCAAGTCC
GCCGGAAAACTGGATGGCGGAGAAGACTGGTCACAGCGGAACCCTCGACC
CCAAGGTCACCGGTTGCTTGATTGTCTGCATTGACCGTGCTACTCGCCTG
GTGAAATCCCAACAGGGTGCCGGAAAGGAATACGTTTGCGTGATCCGCCT
ACATGATAAGATCCCCGGTGGCGAGGCTCAGTTTAAGCGGGCTCTTGAGA
CCTTGACTGGAGCCCTTTTCCAGCGGCCGCCATTGATCTCTGCTGTTAAG
CGTCAGCTTCGTATCCGGACAATTCACGAAAGCAAGCTTTACGAGTTCGA
TAATGAGAGGCATCTTGGTGTCTTCTGGGTCAGCTGTGAAGCCGGAACGT
ACATCAGAACCCTTTGTGTCCACTTGGGTCTTTTGCTCGGTGTTGGTGCG
CACATGCAGGAACTTCGCCGTGTTCGCAGTGGTGCCATGGATGAGAACAG
TGGAATGGTGACTCTACACGACGTTTTGGACGCCCAATGGATGTACGACA
ACCAGCGGGACGAGTCTTATTTGAGGAAGGTCATCAAACCTCTGGAGACT
CTTCTCACCACGTACAAGCGTATCGTTGTCAAAGACAGTGCTGTTAACGC
TGTATGCTATGGTGCTAAGCTTATGGTCCCTGGTCTCCTCCGCTTCGTGC
TTGTCAGGACCGGCCACTTCACGCCAATTCCCGCTGGTAGCACTCCTCTG
AAGCGTGACCTGAAGTCGTACATCAACTCCGGTGTCATCAACCTGGACAA
GCCTTCAAACCCCTCCAGTCATGAGGTTGTTGCTTGGATGAAGAGAATCC
TGAGATGGCGGTCGCAGTGGCTAAGGAGGAGATGGACTACTCAATCAAGC
CTGAGGCTAGTGCCTCGAAAATCGACACGTCGGAGTGGCCGCTTCTTCTG
AAGAATTATGACAAGCAAATACGGTCGTGCTAACGAGGCTACGCCTGCTA
AATGGAAGAACGACTACAAGGATTACAGCGCACCCGAAGAAGAAGGCGCA
CAGGCAGTGGCTCAACCTGTTGCTCAAGAAGAAACCGCTACTCCTGCTGA
GCAAACCGAAACCCCTTCTTCTCCCAACAAGATGGATGTTGATGACGACG
ACGACGAGAAGAAGAAGCGCAAGCGCCACGAAGGTGAGACGCCCGAGGAA
CGGGCCGAGCGCAAGCGCAAGAAGAAGGAGAAGAAGGAAAAGAAGGAGCG
CCGGAAGTCCAAGCAGGAGAAGGAAGAGAGCGACGATAGTGATTAAAGGC
TGGTATTGAGGTCAACGAAGAGGTAGTTCTCATGACCACTAAGGGTGAGG
CTATTGCCATCGGTATCGCTCAAATGTCGACCGTTGAGCTGTCCACCTGC
GATCACGGCGTTGTGGCCAAGGTCAAGCGTTGTATCATGGAACGCGACCT
GTACCCGCGTCGCTGGGGTTTGGGGCCTGTGGCTTTGGAGAAGAAGAAGC
TCAAGTCCGCCGGAAAACTGGATGGCGGAGAAGACTGGTCACAGCGGAAC
CCTCGACCCCAAGGTCACCGGTTGCTTGATTGTCTGCATTGACCGTGCTA
CTCGCCTGGTGAAATCCCAACAGGGTGCCGGAAAGGAATACGTTTGCGTG
ATCCGCCTACATGATAAGATCCCCGGTGGCGAGGCTCAGTTTAAGCGGGC
TCTTGAGACCTTGACTGGAGCCCTTTTCCAGCGGCCGCCATTGATCTCTG
CTGTTAAGCGTCAGCTTCGTATCCGGACAATTCACGAAAGCAAGCTTTAC
GAGTTCGATAATGAGAGGCATCTTGGTGTCTTCTGGGTCAGCTGTGAAGC
CGGAACGTACATCAGAACCCTTTGTGTCCACTTGGGTCTTTTGCTCGGTG
TTGGTGCGCACATGCAGGAACTTCGCCGTGTTCGCAGTGGTGCCATGGAT
GAGAACAGTGGAATGGTGACTCTACACGACGTTTTGGACGCCCAATGGAT
GTACGACAACCAGCGGGACGAGTCTTATTTGAGGAAGGTCATCAAACCTC
TGGAGACTCTTCTCACCACGTACAAGCGTATCGTTGTCAAAGACAGTGCT
GTTAACGCTGTATGCTATGGTGCTAAGCTTATGGTCCCTGGTCTCCTCCG
CTTCGTGCTTGTCAGGACCGGCCACTTCACGCCAATTCCCGCTGGTAGCA
CTCCTCTGAAGCGTGACCTGAAGTCGTACATCAACTCCGGTGTCATCAAC
CTGGACAAGCCTTCAAACCCCTCCAGTCATGAGGTTGTTGCTTGGATGAA
GAGAATCCTGAGATGGCGGTCGCAGTGGCTAAGGAGGAGATGGACTACTC
AATCAAGCCTGAGGCTAGTGCCTCGAAAATCGACACGTCGGAGTGGCCGC
TTCTTCTGAAGAATTATGACAAGCAAATACGGTCGTGCTAACGAGGCTAC
GCCTGCTAAATGGAAGAACGACTACAAGGATTACAGCGCACCCGAAGAAG
AAGGCGCACAGGCAGTGGCTCAACCTGTTGCTCAAGAAGAAACCGCTACT
CCTGCTGAGCAAACCGAAACCCCTTCTTCTCCCAACAAGATGGATGTTGA
TGACGACGACGACGAGAAGAAGAAGCGCAAGCGCCACGAAGGTGAGACGC
CCGAGGAACGGGCCGAGCGCAAGCGCAAGAAGAAGGAGAAGAAGGAAAAG
AAGGAGCGCCGGAAGTCCAAGCAGGAGAAGGAAGAGAGCGACGATAGTGA
TTAAAGGCTGGTATTGAGGTCAACGAAGAGGTAGTTCTCATGACCACTAA
GGGTGAGGCTATTGCCATCGGTATCGCTCAAATGTCGACCGTTGAGCTGT
CCACCTGCGATCACGGCGTTGTGGCCAAGGTCAAGCGTTGTATCATGGAA
CGCGACCTGTACCCGCGTCGCTGGGGTTTGGGGCCTGTGGCTTTGGAGAA
GAAGAAGCTCAAGTCCGCCGGAAAACTGGATGGCGGAGAAGACTGGTCAC
AGCGGAACCCTCGACCCCAAGGTCACCGGTTGCTTGATTGTCTGCATTGA
CCGTGCTACTCGCCTGGTGAAATCCCAACAGGGTGCCGGAAAGGAATACG
TTTGCGTGATCCGCCTACATGATAAGATCCCCGGTGGCGAGGCTCAGTTT
AAGCGGGCTCTTGAGACCTTGACTGGAGCCCTTTTCCAGCGGCCGCCATT
GATCTCTGCTGTTAAGCGTCAGCTTCGTATCCGGACAATTCACGAAAGCA
AGCTTTACGAGTTCGATAATGAGAGGCATCTTGGTGTCTTCTGGGTCAGC
TGTGAAGCCGGAACGTACATCAGAACCCTTTGTGTCCACTTGGGTCTTTT
GCTCGGTGTTGGTGCGCACATGCAGGAACTTCGCCGTGTTCGCAGTGGTG
CCATGGATGAGAACAGTGGAATGGTGACTCTACACGACGTTTTGGACGCC
CAATGGATGTACGACAACCAGCGGGACGAGTCTTATTTGAGGAAGGTCAT
CAAACCTCTGGAGACTCTTCTCACCACGTACAAGCGTATCGTTGTCAAAG
ACAGTGCTGTTAACGCTGTATGCTATGGTGCTAAGCTTATGGTCCCTGGT
CTCCTCCGCTTCGTGCTTGTCAGGACCGGCCACTTCACGCCAATTCCCGC
TGGTAGCACTCCTCTGAAGCGTGACCTGAAGTCGTACATCAACTCCGGTG
TCATCAACCTGGACAAGCCTTCAAACCCCTCCAGTCATGAGGTTGTTGCT
TGGATGAAGAGAATCCTGAGATGGCGGTCGCAGTGGCTAAGGAGGAGATG
GACTACTCAATCAAGCCTGAGGCTAGTGCCTCGAAAATCGACACGTCGGA
GTGGCCGCTTCTTCTGAAGAATTATGACAAGCAAATACGGTCGTGCTAAC
GAGGCTACGCCTGCTAAATGGAAGAACGACTACAAGGATTACAGCGCACC
CGAAGAAGAAGGCGCACAGGCAGTGGCTCAACCTGTTGCTCAAGAAGAAA
CCGCTACTCCTGCTGAGCAAACCGAAACCCCTTCTTCTCCCAACAAGATG
GATGTTGATGACGACGACGACGAGAAGAAGAAGCGCAAGCGCCACGAAGG
TGAGACGCCCGAGGAACGGGCCGAGCGCAAGCGCAAGAAGAAGGAGAAGA
AGGAAAAGAAGGAGCGCCGGAAGTCCAAGCAGGAGAAGGAAGAGAGCGAC
GATAGTGATTAAAGGCTGGTATTGAGGTCAACGAAGAGGTAGTTCTCATG
ACCACTAAGGGTGAGGCTATTGCCATCGGTATCGCTCAAATGTCGACCGT
TGAGCTGTCCACCTGCGATCACGGCGTTGTGGCCAAGGTCAAGCGTTGTA
TCATGGAACGCGACCTGTACCCGCGTCGCTGGGGTTTGGGGCCTGTGGCT
TTGGAGAAGAAGAAGCTCAAGTCCGCCGGAAAACTGGATGGCGGAGAAGA
CTGGTCACAGCGGAACCCTCGACCCCAAGGTCACCGGTTGCTTGATTGTC
TGCATTGACCGTGCTACTCGCCTGGTGAAATCCCAACAGGGTGCCGGAAA
GGAATACGTTTGCGTGATCCGCCTACATGATAAGATCCCCGGTGGCGAGG
CTCAGTTTAAGCGGGCTCTTGAGACCTTGACTGGAGCCCTTTTCCAGCGG
CCGCCATTGATCTCTGCTGTTAAGCGTCAGCTTCGTATCCGGACAATTCA
CGAAAGCAAGCTTTACGAGTTCGATAATGAGAGGCATCTTGGTGTCTTCT
GGGTCAGCTGTGAAGCCGGAACGTACATCAGAACCCTTTGTGTCCACTTG
GGTCTTTTGCTCGGTGTTGGTGCGCACATGCAGGAACTTCGCCGTGTTCG
CAGTGGTGCCATGGATGAGAACAGTGGAATGGTGACTCTACACGACGTTT
TGGACGCCCAATGGATGTACGACAACCAGCGGGACGAGTCTTATTTGAGG
AAGGTCATCAAACCTCTGGAGACTCTTCTCACCACGTACAAGCGTATCGT
TGTCAAAGACAGTGCTGTTAACGCTGTATGCTATGGTGCTAAGCTTATGG
TCCCTGGTCTCCTCCGCTTCGTGCTTGTCAGGACCGGCCACTTCACGCCA
ATTCCCGCTGGTAGCACTCCTCTGAAGCGTGACCTGAAGTCGTACATCAA
CTCCGGTGTCATCAACCTGGACAAGCCTTCAAACCCCTCCAGTCATGAGG
TTGTTGCTTGGATGAAGAGAATCCTGAGATGGCGGTCGCAGTGGCTAAGG
AGGAGATGGACTACTCAATCAAGCCTGAGGCTAGTGCCTCGAAAATCGAC
ACGTCGGAGTGGCCGCTTCTTCTGAAGAATTATGACAAGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0001522 | pseudouridine synthesis |
| GO:0009451 | RNA modification |
| GO:0006396 | RNA processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0009982 | pseudouridine synthase activity |
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926273Q |
| DBxref | InterPro:IPR015947 |
| DBxref | InterPro:IPR020103 |
| DBxref | InterPro:IPR002501 |
| DBxref | InterPro:IPR004802 |
| DBxref | InterPro:IPR032819 |
| DBxref | InterPro:IPR004521 |
| DBxref | InterPro:IPR012960 |
| DBxref | InterPro:IPR002478 |
| DBxref | PFAM:PF01509 |
| DBxref | PFAM:PF16198 |
| DBxref | PFAM:PF01472 |
| DBxref | PFAM:PF08068 |
| Product | centromere/microtubule-binding protein cbf5 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:971108..972796 - |
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