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KYF_006558-T1, KYF_006558-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_006558-T1
Unique NameKYF_006558-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:985155..986029+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_006558-T1 ID=KYF_006558-T1|Name=KYF_006558-T1|organism=Aspergillus niger KYF3|type=mRNA|length=875bp|location=Sequence derived from alignment at ch5:985155..986029+ (Aspergillus niger KYF3)
ATGGCTCCCAAGGTGGAAAACAAGCAAGGTAGGTACAATTTATGCGATTC
ATCCGTCTTCTTGAAATTTGCAGATTTGTTCTTGTCGAAAACCCGGTTTT
GTGATCCTCGAATGGCATCTACATGTGGCGGTACTTCGGGGGATAAGGCC
CTCTCAGCACGAACGAAAAAAAGGCATTCCCGATGAACGATTCGAGCCCT
GTGTTTCCCCCGTTATTGTCAACTTGCATGGATCTTATTTCGAGCGAGCG
ATGGGCTATATTTTATTTTGAAGTGACGGACGGGCTGACATTCTGGATCT
ATAGGCAAGACCAAGCCCAGCGACAAGGCTGGTGCTGCCGCCAAGGCAGT
CATTAAGGGTGCTGGCGTACGTTCTCACAAGGCTTCAAATCCGCCCATGC
TCTGTTCGGTGCTAAATGTCATATAATTTTTCCAGGCGCACAAGGCTCGT
AAGGTCCGCACCTCTACGACCTTCCACCGCCCCAAGACCCTTCAGCTTTC
CCGGTCGCCCAAGTACCCCCGCAAGTCGATCCCCCATGTCCCTCGCCTCG
ATGCGCACAAGGTCATCCTCTACCCTCTCAACACCGAGAGCGCCATGAAG
AAGATCGAGGAGAACAACACCCTGGTCTTCATCGTCGACGTCAAGTCCAA
CAAGCGCCAGATCAAGCTCGCCCTCAAGAAGCTGTACGACGTTGACACCG
TCAAGGTCAACACTCTCGTCAGGTACGACGACCTATCCCATAATCATTGA
TGTACTACAGAAGTCGGAATATCTAACCTTCCTTTAGACCCGATGGACTG
AAGAAGGCCTTCGCCCGTCTAACCCCTGACGTTGATGCTCTGGACATCGC
TGCCACCAAGCTTGCCATCGTCTAG
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Coding sequence (CDS) from alignment at ch5:985155..986029+

>KYF_006558-T1 ID=KYF_006558-T1|Name=KYF_006558-T1|organism=Aspergillus niger KYF3|type=CDS|length=1860bp|location=Sequence derived from alignment at ch5:985155..986029+ (Aspergillus niger KYF3)
ATGGCTCCCAAGGTGGAAAACAAGCAAGGCAAGACCAAGCCCAGCGACAA
GGCTGGTGCTGCCGCCAAGGCAGTCATTAAGGGTGCTGGCGCGCACAAGG
CTCGTAAGGTCCGCACCTCTACGACCTTCCACCGCCCCAAGACCCTTCAG
CTTTCCCGGTCGCCCAAGTACCCCCGCAAGTCGATCCCCCATGTCCCTCG
CCTCGATGCGCACAAGGTCATCCTCTACCCTCTCAACACCGAGAGCGCCA
TGAAGAAGATCGAGGAGAACAACACCCTGGTCTTCATCGTCGACGTCAAG
TCCAACAAGCGCCAGATCAAGCTCGCCCTCAAGAAGCTGTACGACGTTGA
CACCGTCAAGGTCAACACTCTCGTCAGACCCGATGGACTGAAGAAGGCCT
TCGCCCGTCTAACCCCTGACGTTGATGCTCTGGACATCGCTGCCACCAAG
CTTGCCATCGTCTAGATGGCTCCCAAGGTGGAAAACAAGCAAGGCAAGAC
CAAGCCCAGCGACAAGGCTGGTGCTGCCGCCAAGGCAGTCATTAAGGGTG
CTGGCGCGCACAAGGCTCGTAAGGTCCGCACCTCTACGACCTTCCACCGC
CCCAAGACCCTTCAGCTTTCCCGGTCGCCCAAGTACCCCCGCAAGTCGAT
CCCCCATGTCCCTCGCCTCGATGCGCACAAGGTCATCCTCTACCCTCTCA
ACACCGAGAGCGCCATGAAGAAGATCGAGGAGAACAACACCCTGGTCTTC
ATCGTCGACGTCAAGTCCAACAAGCGCCAGATCAAGCTCGCCCTCAAGAA
GCTGTACGACGTTGACACCGTCAAGGTCAACACTCTCGTCAGACCCGATG
GACTGAAGAAGGCCTTCGCCCGTCTAACCCCTGACGTTGATGCTCTGGAC
ATCGCTGCCACCAAGCTTGCCATCGTCTAGATGGCTCCCAAGGTGGAAAA
CAAGCAAGGCAAGACCAAGCCCAGCGACAAGGCTGGTGCTGCCGCCAAGG
CAGTCATTAAGGGTGCTGGCGCGCACAAGGCTCGTAAGGTCCGCACCTCT
ACGACCTTCCACCGCCCCAAGACCCTTCAGCTTTCCCGGTCGCCCAAGTA
CCCCCGCAAGTCGATCCCCCATGTCCCTCGCCTCGATGCGCACAAGGTCA
TCCTCTACCCTCTCAACACCGAGAGCGCCATGAAGAAGATCGAGGAGAAC
AACACCCTGGTCTTCATCGTCGACGTCAAGTCCAACAAGCGCCAGATCAA
GCTCGCCCTCAAGAAGCTGTACGACGTTGACACCGTCAAGGTCAACACTC
TCGTCAGACCCGATGGACTGAAGAAGGCCTTCGCCCGTCTAACCCCTGAC
GTTGATGCTCTGGACATCGCTGCCACCAAGCTTGCCATCGTCTAGATGGC
TCCCAAGGTGGAAAACAAGCAAGGCAAGACCAAGCCCAGCGACAAGGCTG
GTGCTGCCGCCAAGGCAGTCATTAAGGGTGCTGGCGCGCACAAGGCTCGT
AAGGTCCGCACCTCTACGACCTTCCACCGCCCCAAGACCCTTCAGCTTTC
CCGGTCGCCCAAGTACCCCCGCAAGTCGATCCCCCATGTCCCTCGCCTCG
ATGCGCACAAGGTCATCCTCTACCCTCTCAACACCGAGAGCGCCATGAAG
AAGATCGAGGAGAACAACACCCTGGTCTTCATCGTCGACGTCAAGTCCAA
CAAGCGCCAGATCAAGCTCGCCCTCAAGAAGCTGTACGACGTTGACACCG
TCAAGGTCAACACTCTCGTCAGACCCGATGGACTGAAGAAGGCCTTCGCC
CGTCTAACCCCTGACGTTGATGCTCTGGACATCGCTGCCACCAAGCTTGC
CATCGTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL23AKYF_006558Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006558-T1.exon1KYF_006558-T1.exon1Aspergillus niger KYF3exon
KYF_006558-T1.exon2KYF_006558-T1.exon2Aspergillus niger KYF3exon
KYF_006558-T1.exon3KYF_006558-T1.exon3Aspergillus niger KYF3exon
KYF_006558-T1.exon4KYF_006558-T1.exon4Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006558-T1.cdsKYF_006558-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_006558-T1KYF_006558-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092657YR
DBxrefInterPro:IPR012678
DBxrefInterPro:IPR013025
DBxrefInterPro:IPR005633
DBxrefInterPro:IPR012677
DBxrefPFAM:PF03939
DBxrefPFAM:PF00276
Product60S ribosomal protein L23A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:985155..986029 +
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