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KYF_006577-T1, KYF_006577-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_006577-T1
Unique NameKYF_006577-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1031797..1032879+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_006577-T1 ID=KYF_006577-T1|Name=KYF_006577-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1083bp|location=Sequence derived from alignment at ch5:1031797..1032879+ (Aspergillus niger KYF3)
ATGGCCGTTGGAAAGTACGTGAATGCCCTACTCTATTATGATTTATGTTG
CAGCAATTCGATTGTAGTAGTCTCTTACTGATTTTATGGCAGGAACAAGC
GCTTGTCGAAGGGCAAGAAGGGTGTTAAGAAGAGAACTGTCGACCCTTTC
ACCCGGAAAGACGAGTACTCTGTGAAGGTAAGTGTGCAACTTGAGGGTGT
GTGGATTTTGCTGACAGGAATAGGCTCCCTCGACCTTCCAGACCAGAGAG
TATGGCATCGCCCCTCCCCCCCAAATTTCGTCGTCGGGACTTTCAGATAT
TCTTTCGCCTCGTTATAATCATTTTTTGTCGCATTCCCCATGTGCAAACC
AGTCACTGACCAGTTCTTGTTGAAGTGTTGGAAAGACTCTGGTGAACCGT
ACCAGTGGTCTGAAGAACGCGAACGATTCCCTGAAGGGCCGTATCTTCGA
AGTCTCCCTTGCCGACTTGCAGAATGACGAGGACCATGCCTTCCGTAAGG
TCAAGCTCCGCGTGGACGAAATCCAGGGAAAGAACTGCCTGACCAACTTC
CACGGTCTGGATTTCACGACCGACAAGCTGCGATCCCTTGTGCGCAAGTG
GCAGTCGCTGATTGAAGCCAACGTCACTGTGAAGACGACCGATGACTATC
TTCTCCGTCTGTTCGCCATCGCCTTCACGAAGAGACGCCCCAACCAAATC
AAGAAGACTACATATGCTCGCTCGTCCCAAATCCGCGCTATTCGCAAGAA
GATGACCGAGATCATGCAGCGCGAGGCCGCTAGCTGCTCTCTCGCTCAGC
TTACTACCAAGTTGATCCCCGAAGTCATCGGTCGTGAGATTGAGAAGGCT
ACCCAGGGAATTTACCCCCTGCAGAACGTTCGTCCCCCTCGACCCTCGTA
TTCTATCAAATGATTGCGATCCATCTAATACTCTATTAGGTCCACATTCG
CAAGGTCAAGCTTCTCAAGTCCCCCAAGTTCGACCTCGGTGCCCTCCTTA
ACTTGCACGGCGAGTCTACAACCGATGATAAGGGACACAAGGTTGAGAGA
GAGTTCAAGGAACAGGTTCTTGAGAGCGTGTAA
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Coding sequence (CDS) from alignment at ch5:1031797..1032879+

>KYF_006577-T1 ID=KYF_006577-T1|Name=KYF_006577-T1|organism=Aspergillus niger KYF3|type=CDS|length=3855bp|location=Sequence derived from alignment at ch5:1031797..1032879+ (Aspergillus niger KYF3)
ATGGCCGTTGGAAAGAACAAGCGCTTGTCGAAGGGCAAGAAGGGTGTTAA
GAAGAGAACTGTCGACCCTTTCACCCGGAAAGACGAGTACTCTGTGAAGG
CTCCCTCGACCTTCCAGACCAGAGATGTTGGAAAGACTCTGGTGAACCGT
ACCAGTGGTCTGAAGAACGCGAACGATTCCCTGAAGGGCCGTATCTTCGA
AGTCTCCCTTGCCGACTTGCAGAATGACGAGGACCATGCCTTCCGTAAGG
TCAAGCTCCGCGTGGACGAAATCCAGGGAAAGAACTGCCTGACCAACTTC
CACGGTCTGGATTTCACGACCGACAAGCTGCGATCCCTTGTGCGCAAGTG
GCAGTCGCTGATTGAAGCCAACGTCACTGTGAAGACGACCGATGACTATC
TTCTCCGTCTGTTCGCCATCGCCTTCACGAAGAGACGCCCCAACCAAATC
AAGAAGACTACATATGCTCGCTCGTCCCAAATCCGCGCTATTCGCAAGAA
GATGACCGAGATCATGCAGCGCGAGGCCGCTAGCTGCTCTCTCGCTCAGC
TTACTACCAAGTTGATCCCCGAAGTCATCGGTCGTGAGATTGAGAAGGCT
ACCCAGGGAATTTACCCCCTGCAGAACGTCCACATTCGCAAGGTCAAGCT
TCTCAAGTCCCCCAAGTTCGACCTCGGTGCCCTCCTTAACTTGCACGGCG
AGTCTACAACCGATGATAAGGGACACAAGGTTGAGAGAGAGTTCAAGGAA
CAGGTTCTTGAGAGCGTGTAAATGGCCGTTGGAAAGAACAAGCGCTTGTC
GAAGGGCAAGAAGGGTGTTAAGAAGAGAACTGTCGACCCTTTCACCCGGA
AAGACGAGTACTCTGTGAAGGCTCCCTCGACCTTCCAGACCAGAGATGTT
GGAAAGACTCTGGTGAACCGTACCAGTGGTCTGAAGAACGCGAACGATTC
CCTGAAGGGCCGTATCTTCGAAGTCTCCCTTGCCGACTTGCAGAATGACG
AGGACCATGCCTTCCGTAAGGTCAAGCTCCGCGTGGACGAAATCCAGGGA
AAGAACTGCCTGACCAACTTCCACGGTCTGGATTTCACGACCGACAAGCT
GCGATCCCTTGTGCGCAAGTGGCAGTCGCTGATTGAAGCCAACGTCACTG
TGAAGACGACCGATGACTATCTTCTCCGTCTGTTCGCCATCGCCTTCACG
AAGAGACGCCCCAACCAAATCAAGAAGACTACATATGCTCGCTCGTCCCA
AATCCGCGCTATTCGCAAGAAGATGACCGAGATCATGCAGCGCGAGGCCG
CTAGCTGCTCTCTCGCTCAGCTTACTACCAAGTTGATCCCCGAAGTCATC
GGTCGTGAGATTGAGAAGGCTACCCAGGGAATTTACCCCCTGCAGAACGT
CCACATTCGCAAGGTCAAGCTTCTCAAGTCCCCCAAGTTCGACCTCGGTG
CCCTCCTTAACTTGCACGGCGAGTCTACAACCGATGATAAGGGACACAAG
GTTGAGAGAGAGTTCAAGGAACAGGTTCTTGAGAGCGTGTAAATGGCCGT
TGGAAAGAACAAGCGCTTGTCGAAGGGCAAGAAGGGTGTTAAGAAGAGAA
CTGTCGACCCTTTCACCCGGAAAGACGAGTACTCTGTGAAGGCTCCCTCG
ACCTTCCAGACCAGAGATGTTGGAAAGACTCTGGTGAACCGTACCAGTGG
TCTGAAGAACGCGAACGATTCCCTGAAGGGCCGTATCTTCGAAGTCTCCC
TTGCCGACTTGCAGAATGACGAGGACCATGCCTTCCGTAAGGTCAAGCTC
CGCGTGGACGAAATCCAGGGAAAGAACTGCCTGACCAACTTCCACGGTCT
GGATTTCACGACCGACAAGCTGCGATCCCTTGTGCGCAAGTGGCAGTCGC
TGATTGAAGCCAACGTCACTGTGAAGACGACCGATGACTATCTTCTCCGT
CTGTTCGCCATCGCCTTCACGAAGAGACGCCCCAACCAAATCAAGAAGAC
TACATATGCTCGCTCGTCCCAAATCCGCGCTATTCGCAAGAAGATGACCG
AGATCATGCAGCGCGAGGCCGCTAGCTGCTCTCTCGCTCAGCTTACTACC
AAGTTGATCCCCGAAGTCATCGGTCGTGAGATTGAGAAGGCTACCCAGGG
AATTTACCCCCTGCAGAACGTCCACATTCGCAAGGTCAAGCTTCTCAAGT
CCCCCAAGTTCGACCTCGGTGCCCTCCTTAACTTGCACGGCGAGTCTACA
ACCGATGATAAGGGACACAAGGTTGAGAGAGAGTTCAAGGAACAGGTTCT
TGAGAGCGTGTAAATGGCCGTTGGAAAGAACAAGCGCTTGTCGAAGGGCA
AGAAGGGTGTTAAGAAGAGAACTGTCGACCCTTTCACCCGGAAAGACGAG
TACTCTGTGAAGGCTCCCTCGACCTTCCAGACCAGAGATGTTGGAAAGAC
TCTGGTGAACCGTACCAGTGGTCTGAAGAACGCGAACGATTCCCTGAAGG
GCCGTATCTTCGAAGTCTCCCTTGCCGACTTGCAGAATGACGAGGACCAT
GCCTTCCGTAAGGTCAAGCTCCGCGTGGACGAAATCCAGGGAAAGAACTG
CCTGACCAACTTCCACGGTCTGGATTTCACGACCGACAAGCTGCGATCCC
TTGTGCGCAAGTGGCAGTCGCTGATTGAAGCCAACGTCACTGTGAAGACG
ACCGATGACTATCTTCTCCGTCTGTTCGCCATCGCCTTCACGAAGAGACG
CCCCAACCAAATCAAGAAGACTACATATGCTCGCTCGTCCCAAATCCGCG
CTATTCGCAAGAAGATGACCGAGATCATGCAGCGCGAGGCCGCTAGCTGC
TCTCTCGCTCAGCTTACTACCAAGTTGATCCCCGAAGTCATCGGTCGTGA
GATTGAGAAGGCTACCCAGGGAATTTACCCCCTGCAGAACGTCCACATTC
GCAAGGTCAAGCTTCTCAAGTCCCCCAAGTTCGACCTCGGTGCCCTCCTT
AACTTGCACGGCGAGTCTACAACCGATGATAAGGGACACAAGGTTGAGAG
AGAGTTCAAGGAACAGGTTCTTGAGAGCGTGTAAATGGCCGTTGGAAAGA
ACAAGCGCTTGTCGAAGGGCAAGAAGGGTGTTAAGAAGAGAACTGTCGAC
CCTTTCACCCGGAAAGACGAGTACTCTGTGAAGGCTCCCTCGACCTTCCA
GACCAGAGATGTTGGAAAGACTCTGGTGAACCGTACCAGTGGTCTGAAGA
ACGCGAACGATTCCCTGAAGGGCCGTATCTTCGAAGTCTCCCTTGCCGAC
TTGCAGAATGACGAGGACCATGCCTTCCGTAAGGTCAAGCTCCGCGTGGA
CGAAATCCAGGGAAAGAACTGCCTGACCAACTTCCACGGTCTGGATTTCA
CGACCGACAAGCTGCGATCCCTTGTGCGCAAGTGGCAGTCGCTGATTGAA
GCCAACGTCACTGTGAAGACGACCGATGACTATCTTCTCCGTCTGTTCGC
CATCGCCTTCACGAAGAGACGCCCCAACCAAATCAAGAAGACTACATATG
CTCGCTCGTCCCAAATCCGCGCTATTCGCAAGAAGATGACCGAGATCATG
CAGCGCGAGGCCGCTAGCTGCTCTCTCGCTCAGCTTACTACCAAGTTGAT
CCCCGAAGTCATCGGTCGTGAGATTGAGAAGGCTACCCAGGGAATTTACC
CCCTGCAGAACGTCCACATTCGCAAGGTCAAGCTTCTCAAGTCCCCCAAG
TTCGACCTCGGTGCCCTCCTTAACTTGCACGGCGAGTCTACAACCGATGA
TAAGGGACACAAGGTTGAGAGAGAGTTCAAGGAACAGGTTCTTGAGAGCG
TGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS1KYF_006577Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_006577-T1KYF_006577-T1-proteinAspergillus niger KYF3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006577-T1.exon1KYF_006577-T1.exon1Aspergillus niger KYF3exon
KYF_006577-T1.exon2KYF_006577-T1.exon2Aspergillus niger KYF3exon
KYF_006577-T1.exon3KYF_006577-T1.exon3Aspergillus niger KYF3exon
KYF_006577-T1.exon4KYF_006577-T1.exon4Aspergillus niger KYF3exon
KYF_006577-T1.exon5KYF_006577-T1.exon5Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006577-T1.cdsKYF_006577-T1.cdsAspergillus niger KYF3CDS


Properties
Property NameValue
DBxrefInterPro:IPR027500
DBxrefInterPro:IPR018281
DBxrefInterPro:IPR001593
DBxrefPFAM:PF01015
Productribosomal 40S subunit protein S1B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1031797..1032879 +
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