You are here

Home

KYF_006627-T1, KYF_006627-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_006627-T1
Unique NameKYF_006627-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1284034..1285052-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_006627-T1 ID=KYF_006627-T1|Name=KYF_006627-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1019bp|location=Sequence derived from alignment at ch5:1284034..1285052- (Aspergillus niger KYF3)
ATGTTCATTCTTGTTAGTGATCGACTACTACTACTCTCGCTTCTATACGC
ACCCAGTGCATACCGATAGTGGAGTATGAGCTGACCTGTATCTCACAGAC
TACGGTCTCCGATCTTATCCAGATCTCCCCGGAGGATTTCTCCAAATATA
GCGCGGTGGCTCTCGAGGATAACATCAACGAGAAGTATGCCAACAAAGTA
TGTACTAGCGCGTGAAGTTCCTTTCGTCATGTACTTTAAGCTCAGCACGG
TCTGAGAGCGATGCTTGTGAGCAAACATTGTTGACTCTGTTGTGCATAGG
TTATTCAAAAGATCGGCCTCTGTATTGGTTTCTATGACCTGCTAGAGTCT
TCAGATGGTTTGATCGGCCACGGCACTGGACTTGTCAATGTAAATGGTAT
GTTCTGTCTTCTATCTACTCTGATCTTACGGTGTAGCAGAGAGACTGACC
CTATAACAGTCAAATTCCGTCTGATTGTCTTCCGCCCGTTCAAGGGCGAG
ATCATGCTTGGGAAGATCTCGAGTGCGACAGAACATGGCATTAAGGGTGA
GTACTCCGTACATGCCATGTATATGCTTGATGCATGATGTTGACAACTCC
CTAGTTGCCGTGGAATTCTTCAACGATATCCTCGTGCCCCCTGATCTACT
CCTGGATGGCGCCAGATTGTGAGTGTACCACCTATTCCAACTCTGCGATT
TCTCAGCTTACTGACAAATACCAGTGACTACGCGGATCAAGTCTGGATCT
GGGAGAACGAAGATGGCTCCACTTTCTACTTTGATGTTGGTGAAGTTGTT
CGATTCCGCGTTGAGATGGAAGAATGGCACGACCAAATCCCCAATGCACC
GGATCTAGGAGATGCCGCCGCGATCGAGCGGAAACCTCCATATTCGATTA
TTGTGAGTGACTTGCCTTACTCCAAGTATATGATTCTACCTATGTTGAAG
ACAGTCTAACATGTTATGGTATAGGGATCGATGCAAATGGCAGGGTTGGG
TCCGATCTCATGGTGGTGA
back to top

Coding sequence (CDS) from alignment at ch5:1284034..1285052-

>KYF_006627-T1 ID=KYF_006627-T1|Name=KYF_006627-T1|organism=Aspergillus niger KYF3|type=CDS|length=4074bp|location=Sequence derived from alignment at ch5:1284034..1285052- (Aspergillus niger KYF3)
GGATCGATGCAAATGGCAGGGTTGGGTCCGATCTCATGGTGGTGATGACT
ACGCGGATCAAGTCTGGATCTGGGAGAACGAAGATGGCTCCACTTTCTAC
TTTGATGTTGGTGAAGTTGTTCGATTCCGCGTTGAGATGGAAGAATGGCA
CGACCAAATCCCCAATGCACCGGATCTAGGAGATGCCGCCGCGATCGAGC
GGAAACCTCCATATTCGATTATTTTGCCGTGGAATTCTTCAACGATATCC
TCGTGCCCCCTGATCTACTCCTGGATGGCGCCAGATTTCAAATTCCGTCT
GATTGTCTTCCGCCCGTTCAAGGGCGAGATCATGCTTGGGAAGATCTCGA
GTGCGACAGAACATGGCATTAAGGGTTATTCAAAAGATCGGCCTCTGTAT
TGGTTTCTATGACCTGCTAGAGTCTTCAGATGGTTTGATCGGCCACGGCA
CTGGACTTGTCAATGTAAATGACTACGGTCTCCGATCTTATCCAGATCTC
CCCGGAGGATTTCTCCAAATATAGCGCGGTGGCTCTCGAGGATAACATCA
ACGAGAAGTATGCCAACAAAATGTTCATTCTTGGATCGATGCAAATGGCA
GGGTTGGGTCCGATCTCATGGTGGTGATGACTACGCGGATCAAGTCTGGA
TCTGGGAGAACGAAGATGGCTCCACTTTCTACTTTGATGTTGGTGAAGTT
GTTCGATTCCGCGTTGAGATGGAAGAATGGCACGACCAAATCCCCAATGC
ACCGGATCTAGGAGATGCCGCCGCGATCGAGCGGAAACCTCCATATTCGA
TTATTTTGCCGTGGAATTCTTCAACGATATCCTCGTGCCCCCTGATCTAC
TCCTGGATGGCGCCAGATTTCAAATTCCGTCTGATTGTCTTCCGCCCGTT
CAAGGGCGAGATCATGCTTGGGAAGATCTCGAGTGCGACAGAACATGGCA
TTAAGGGTTATTCAAAAGATCGGCCTCTGTATTGGTTTCTATGACCTGCT
AGAGTCTTCAGATGGTTTGATCGGCCACGGCACTGGACTTGTCAATGTAA
ATGACTACGGTCTCCGATCTTATCCAGATCTCCCCGGAGGATTTCTCCAA
ATATAGCGCGGTGGCTCTCGAGGATAACATCAACGAGAAGTATGCCAACA
AAATGTTCATTCTTGGATCGATGCAAATGGCAGGGTTGGGTCCGATCTCA
TGGTGGTGATGACTACGCGGATCAAGTCTGGATCTGGGAGAACGAAGATG
GCTCCACTTTCTACTTTGATGTTGGTGAAGTTGTTCGATTCCGCGTTGAG
ATGGAAGAATGGCACGACCAAATCCCCAATGCACCGGATCTAGGAGATGC
CGCCGCGATCGAGCGGAAACCTCCATATTCGATTATTTTGCCGTGGAATT
CTTCAACGATATCCTCGTGCCCCCTGATCTACTCCTGGATGGCGCCAGAT
TTCAAATTCCGTCTGATTGTCTTCCGCCCGTTCAAGGGCGAGATCATGCT
TGGGAAGATCTCGAGTGCGACAGAACATGGCATTAAGGGTTATTCAAAAG
ATCGGCCTCTGTATTGGTTTCTATGACCTGCTAGAGTCTTCAGATGGTTT
GATCGGCCACGGCACTGGACTTGTCAATGTAAATGACTACGGTCTCCGAT
CTTATCCAGATCTCCCCGGAGGATTTCTCCAAATATAGCGCGGTGGCTCT
CGAGGATAACATCAACGAGAAGTATGCCAACAAAATGTTCATTCTTGGAT
CGATGCAAATGGCAGGGTTGGGTCCGATCTCATGGTGGTGATGACTACGC
GGATCAAGTCTGGATCTGGGAGAACGAAGATGGCTCCACTTTCTACTTTG
ATGTTGGTGAAGTTGTTCGATTCCGCGTTGAGATGGAAGAATGGCACGAC
CAAATCCCCAATGCACCGGATCTAGGAGATGCCGCCGCGATCGAGCGGAA
ACCTCCATATTCGATTATTTTGCCGTGGAATTCTTCAACGATATCCTCGT
GCCCCCTGATCTACTCCTGGATGGCGCCAGATTTCAAATTCCGTCTGATT
GTCTTCCGCCCGTTCAAGGGCGAGATCATGCTTGGGAAGATCTCGAGTGC
GACAGAACATGGCATTAAGGGTTATTCAAAAGATCGGCCTCTGTATTGGT
TTCTATGACCTGCTAGAGTCTTCAGATGGTTTGATCGGCCACGGCACTGG
ACTTGTCAATGTAAATGACTACGGTCTCCGATCTTATCCAGATCTCCCCG
GAGGATTTCTCCAAATATAGCGCGGTGGCTCTCGAGGATAACATCAACGA
GAAGTATGCCAACAAAATGTTCATTCTTGGATCGATGCAAATGGCAGGGT
TGGGTCCGATCTCATGGTGGTGATGACTACGCGGATCAAGTCTGGATCTG
GGAGAACGAAGATGGCTCCACTTTCTACTTTGATGTTGGTGAAGTTGTTC
GATTCCGCGTTGAGATGGAAGAATGGCACGACCAAATCCCCAATGCACCG
GATCTAGGAGATGCCGCCGCGATCGAGCGGAAACCTCCATATTCGATTAT
TTTGCCGTGGAATTCTTCAACGATATCCTCGTGCCCCCTGATCTACTCCT
GGATGGCGCCAGATTTCAAATTCCGTCTGATTGTCTTCCGCCCGTTCAAG
GGCGAGATCATGCTTGGGAAGATCTCGAGTGCGACAGAACATGGCATTAA
GGGTTATTCAAAAGATCGGCCTCTGTATTGGTTTCTATGACCTGCTAGAG
TCTTCAGATGGTTTGATCGGCCACGGCACTGGACTTGTCAATGTAAATGA
CTACGGTCTCCGATCTTATCCAGATCTCCCCGGAGGATTTCTCCAAATAT
AGCGCGGTGGCTCTCGAGGATAACATCAACGAGAAGTATGCCAACAAAAT
GTTCATTCTTGGATCGATGCAAATGGCAGGGTTGGGTCCGATCTCATGGT
GGTGATGACTACGCGGATCAAGTCTGGATCTGGGAGAACGAAGATGGCTC
CACTTTCTACTTTGATGTTGGTGAAGTTGTTCGATTCCGCGTTGAGATGG
AAGAATGGCACGACCAAATCCCCAATGCACCGGATCTAGGAGATGCCGCC
GCGATCGAGCGGAAACCTCCATATTCGATTATTTTGCCGTGGAATTCTTC
AACGATATCCTCGTGCCCCCTGATCTACTCCTGGATGGCGCCAGATTTCA
AATTCCGTCTGATTGTCTTCCGCCCGTTCAAGGGCGAGATCATGCTTGGG
AAGATCTCGAGTGCGACAGAACATGGCATTAAGGGTTATTCAAAAGATCG
GCCTCTGTATTGGTTTCTATGACCTGCTAGAGTCTTCAGATGGTTTGATC
GGCCACGGCACTGGACTTGTCAATGTAAATGACTACGGTCTCCGATCTTA
TCCAGATCTCCCCGGAGGATTTCTCCAAATATAGCGCGGTGGCTCTCGAG
GATAACATCAACGAGAAGTATGCCAACAAAATGTTCATTCTTGGATCGAT
GCAAATGGCAGGGTTGGGTCCGATCTCATGGTGGTGATGACTACGCGGAT
CAAGTCTGGATCTGGGAGAACGAAGATGGCTCCACTTTCTACTTTGATGT
TGGTGAAGTTGTTCGATTCCGCGTTGAGATGGAAGAATGGCACGACCAAA
TCCCCAATGCACCGGATCTAGGAGATGCCGCCGCGATCGAGCGGAAACCT
CCATATTCGATTATTTTGCCGTGGAATTCTTCAACGATATCCTCGTGCCC
CCTGATCTACTCCTGGATGGCGCCAGATTTCAAATTCCGTCTGATTGTCT
TCCGCCCGTTCAAGGGCGAGATCATGCTTGGGAAGATCTCGAGTGCGACA
GAACATGGCATTAAGGGTTATTCAAAAGATCGGCCTCTGTATTGGTTTCT
ATGACCTGCTAGAGTCTTCAGATGGTTTGATCGGCCACGGCACTGGACTT
GTCAATGTAAATGACTACGGTCTCCGATCTTATCCAGATCTCCCCGGAGG
ATTTCTCCAAATATAGCGCGGTGGCTCTCGAGGATAACATCAACGAGAAG
TATGCCAACAAAATGTTCATTCTT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003899DNA-directed 5'-3' RNA polymerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_006627KYF_006627Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_006627-T1KYF_006627-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006627-T1.cdsKYF_006627-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006627-T1.exon7KYF_006627-T1.exon7Aspergillus niger KYF3exon
KYF_006627-T1.exon6KYF_006627-T1.exon6Aspergillus niger KYF3exon
KYF_006627-T1.exon5KYF_006627-T1.exon5Aspergillus niger KYF3exon
KYF_006627-T1.exon4KYF_006627-T1.exon4Aspergillus niger KYF3exon
KYF_006627-T1.exon3KYF_006627-T1.exon3Aspergillus niger KYF3exon
KYF_006627-T1.exon2KYF_006627-T1.exon2Aspergillus niger KYF3exon
KYF_006627-T1.exon1KYF_006627-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR005576
DBxrefInterPro:IPR036898
DBxrefInterPro:IPR013238
DBxrefPFAM:PF03876
DBxrefPFAM:PF08292
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1284034..1285052 -
Powered by Drupal