You are here

Home

KYF_006643-T1, KYF_006643-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_006643-T1
Unique NameKYF_006643-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1323179..1323962+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_006643-T1 ID=KYF_006643-T1|Name=KYF_006643-T1|organism=Aspergillus niger KYF3|type=mRNA|length=784bp|location=Sequence derived from alignment at ch5:1323179..1323962+ (Aspergillus niger KYF3)
ATGGATCTTCCCCCACTCTCACAAGAGCAACTGACCGCCGTCGTTGCCTC
TGCTAAAACGCCGACGGAGCTCTACGAAACACTATCAGACTATGAAAGCC
AGGCTTGCCTGCTCTCCATGCAAAAGGGCAAACATGCAGAACTACTAAGT
CTTTACTACTCTACATACTTCTTCTCCAACCTTCTCATAGACAAAACGTA
AGCTATTCCCCCGGCTATCCCCACAAGTTGGCAAATCGCTAATCCGCAAG
TTATGCAGCATCGAAGCTCGCCTAACGACACAACGCATGCCACAAGAATT
ATTACAAAATGACTCGTCGCTACAGAATTGTTTGACGCTTCTCCGAGCCG
TTTGGCAACGGAAATATGAGCAAGTCTATAAGATCCTGCGAGAACTGCCG
TGGCCAGAAGCACTCCAACCCATAGTCCAAAGTTATGAATGTAAGGCGAA
CCATTCTCTCGAATATGCCTTGCCTTTTGCTACGTCATTCACTTGCTGAC
TCTATTTAGCTCATTTCCAGGAAAAGACGTTAAAGGAAGTCAGCAGAGCC
TATGAGGCGATAAGGCCAACAGCCGCTGCAACCTATCTCGGCCTTGATCC
TGCCGCCGCACAACAGGGCGATCCGGCCATCATGCAAAAGTTCATAGCGT
ATGGATGGACGTGGGATCAGGAGAAAGGGTTGTTGCACCCGAAACCGATC
GTTGATGAAGTCCCTCAGAAAGATGTTCGACTGTACAATGAACTGAGTGA
GGTCATGGCGCTGATCGGAAATCGCCGGAGTTAA
back to top

Coding sequence (CDS) from alignment at ch5:1323179..1323962+

>KYF_006643-T1 ID=KYF_006643-T1|Name=KYF_006643-T1|organism=Aspergillus niger KYF3|type=CDS|length=1962bp|location=Sequence derived from alignment at ch5:1323179..1323962+ (Aspergillus niger KYF3)
ATGGATCTTCCCCCACTCTCACAAGAGCAACTGACCGCCGTCGTTGCCTC
TGCTAAAACGCCGACGGAGCTCTACGAAACACTATCAGACTATGAAAGCC
AGGCTTGCCTGCTCTCCATGCAAAAGGGCAAACATGCAGAACTACTAAGT
CTTTACTACTCTACATACTTCTTCTCCAACCTTCTCATAGACAAAACCAT
CGAAGCTCGCCTAACGACACAACGCATGCCACAAGAATTATTACAAAATG
ACTCGTCGCTACAGAATTGTTTGACGCTTCTCCGAGCCGTTTGGCAACGG
AAATATGAGCAAGTCTATAAGATCCTGCGAGAACTGCCGTGGCCAGAAGC
ACTCCAACCCATAGTCCAAAGTTATGAATCTCATTTCCAGGAAAAGACGT
TAAAGGAAGTCAGCAGAGCCTATGAGGCGATAAGGCCAACAGCCGCTGCA
ACCTATCTCGGCCTTGATCCTGCCGCCGCACAACAGGGCGATCCGGCCAT
CATGCAAAAGTTCATAGCGTATGGATGGACGTGGGATCAGGAGAAAGGGT
TGTTGCACCCGAAACCGATCGTTGATGAAGTCCCTCAGAAAGATGTTCGA
CTGTACAATGAACTGAGTGAGGTCATGGCGCTGATCGGAAATCGCCGGAG
TTAAATGGATCTTCCCCCACTCTCACAAGAGCAACTGACCGCCGTCGTTG
CCTCTGCTAAAACGCCGACGGAGCTCTACGAAACACTATCAGACTATGAA
AGCCAGGCTTGCCTGCTCTCCATGCAAAAGGGCAAACATGCAGAACTACT
AAGTCTTTACTACTCTACATACTTCTTCTCCAACCTTCTCATAGACAAAA
CCATCGAAGCTCGCCTAACGACACAACGCATGCCACAAGAATTATTACAA
AATGACTCGTCGCTACAGAATTGTTTGACGCTTCTCCGAGCCGTTTGGCA
ACGGAAATATGAGCAAGTCTATAAGATCCTGCGAGAACTGCCGTGGCCAG
AAGCACTCCAACCCATAGTCCAAAGTTATGAATCTCATTTCCAGGAAAAG
ACGTTAAAGGAAGTCAGCAGAGCCTATGAGGCGATAAGGCCAACAGCCGC
TGCAACCTATCTCGGCCTTGATCCTGCCGCCGCACAACAGGGCGATCCGG
CCATCATGCAAAAGTTCATAGCGTATGGATGGACGTGGGATCAGGAGAAA
GGGTTGTTGCACCCGAAACCGATCGTTGATGAAGTCCCTCAGAAAGATGT
TCGACTGTACAATGAACTGAGTGAGGTCATGGCGCTGATCGGAAATCGCC
GGAGTTAAATGGATCTTCCCCCACTCTCACAAGAGCAACTGACCGCCGTC
GTTGCCTCTGCTAAAACGCCGACGGAGCTCTACGAAACACTATCAGACTA
TGAAAGCCAGGCTTGCCTGCTCTCCATGCAAAAGGGCAAACATGCAGAAC
TACTAAGTCTTTACTACTCTACATACTTCTTCTCCAACCTTCTCATAGAC
AAAACCATCGAAGCTCGCCTAACGACACAACGCATGCCACAAGAATTATT
ACAAAATGACTCGTCGCTACAGAATTGTTTGACGCTTCTCCGAGCCGTTT
GGCAACGGAAATATGAGCAAGTCTATAAGATCCTGCGAGAACTGCCGTGG
CCAGAAGCACTCCAACCCATAGTCCAAAGTTATGAATCTCATTTCCAGGA
AAAGACGTTAAAGGAAGTCAGCAGAGCCTATGAGGCGATAAGGCCAACAG
CCGCTGCAACCTATCTCGGCCTTGATCCTGCCGCCGCACAACAGGGCGAT
CCGGCCATCATGCAAAAGTTCATAGCGTATGGATGGACGTGGGATCAGGA
GAAAGGGTTGTTGCACCCGAAACCGATCGTTGATGAAGTCCCTCAGAAAG
ATGTTCGACTGTACAATGAACTGAGTGAGGTCATGGCGCTGATCGGAAAT
CGCCGGAGTTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_006643KYF_006643Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006643-T1.exon1KYF_006643-T1.exon1Aspergillus niger KYF3exon
KYF_006643-T1.exon2KYF_006643-T1.exon2Aspergillus niger KYF3exon
KYF_006643-T1.exon3KYF_006643-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006643-T1.cdsKYF_006643-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_006643-T1KYF_006643-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR033464
DBxrefPFAM:PF10075
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1323179..1323962 +
Powered by Drupal