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KYF_006763-T1, KYF_006763-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_006763-T1
Unique NameKYF_006763-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1693702..1694868-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_006763-T1 ID=KYF_006763-T1|Name=KYF_006763-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1167bp|location=Sequence derived from alignment at ch5:1693702..1694868- (Aspergillus niger KYF3)
ATGCCTTCTGCCAAGCCTTTGTTCTGCCTTGCGACCCTGGCCGGTGCCGC
TCTGGCTGCTCCTGCGCCTTCCCGCGTCTCCGACTTCACCAAGCGGTCCA
CCTGCACCTTCACTGATGCGGCCACCGCCTCCGAGAGCAAGACCTCTTGC
TCCGACATCGTCCTCAAGGACATCACCGTCCCTGCTGGTGAGACCCTTAA
CCTGAAGGACCTCAACGACGGCACCACCGTAAGCGTCCCCTCCCAGCCCT
AGCAGCAGCCCCAATCCTAACAAGCATTCCAGGTCACCTTCGAGGGAACC
ACCACCTGGGAGTACGAGGAGTGGGATGGACCCCTTCTCCGTATCTCCGG
TAAGGACATCACCGTGACCCAGTCCTCCGACGCCGTCCTCGACGGCAACG
GCGCCAAGTGGTGGGACGGTGAGGGAACCAACGGCGGCAAGACCAAGCCC
AAGTTCTTCTACGCCCACGACCTCGACGACTCCAAGATCTCCGGTCTTTA
CATCAAGAACACCCCCGTCCAGGCCATCTCCGTCGAGTCGGACAACCTCG
TGATCGAGGACGTCACCATCGACAACAGCGACGGTGACTCCGAGGGCGGT
CACAACACCGACGGTTTCGACATCAGCGAGAGTACCTACATCACCATCAC
CGGCGCCACCGTCAAGAACCAGGACGACTGCGTCGCCATCAACTCTGGTG
AGAACATCTACTTCTCCGGCGGTACCTGCTCCGGCGGTCACGGTCTCTCC
ATCGGCTCCGTCGGTGGCCGCGACGACAACACCGTCAAGAACGTCACTTT
CATCGACTCGACTGTCTCCGACTCTGAGAACGGTGTTCGCATCAAGACCG
TCTACGACGCTACTGGTACTGTCGAGGACATCACCTACTCCAACATCCAG
CTCTCCGGTATTTCCGACTACGGTATCGTCATCGAGCAGGACTACGAGAA
TGGTGACCCCACTGGTACTCCCTCCAACGGTGTTACCATCTCCGACGTCA
CCCTCGAGGACATCACTGGCTCGGTTGACTCCGACGCTGTCGAGATCTAC
ATCCTTTGCGGTGATGGCAGCTGCTCTGACTGGACCATGTCTGGCATTGA
CATCACCGGCGGTGAGACCAGCAGCGATTGCGAGAACGTTCCTTCTGGTG
CTTCTTGCGATCAGTAA
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Coding sequence (CDS) from alignment at ch5:1693702..1694868-

>KYF_006763-T1 ID=KYF_006763-T1|Name=KYF_006763-T1|organism=Aspergillus niger KYF3|type=CDS|length=2226bp|location=Sequence derived from alignment at ch5:1693702..1694868- (Aspergillus niger KYF3)
GTCACCTTCGAGGGAACCACCACCTGGGAGTACGAGGAGTGGGATGGACC
CCTTCTCCGTATCTCCGGTAAGGACATCACCGTGACCCAGTCCTCCGACG
CCGTCCTCGACGGCAACGGCGCCAAGTGGTGGGACGGTGAGGGAACCAAC
GGCGGCAAGACCAAGCCCAAGTTCTTCTACGCCCACGACCTCGACGACTC
CAAGATCTCCGGTCTTTACATCAAGAACACCCCCGTCCAGGCCATCTCCG
TCGAGTCGGACAACCTCGTGATCGAGGACGTCACCATCGACAACAGCGAC
GGTGACTCCGAGGGCGGTCACAACACCGACGGTTTCGACATCAGCGAGAG
TACCTACATCACCATCACCGGCGCCACCGTCAAGAACCAGGACGACTGCG
TCGCCATCAACTCTGGTGAGAACATCTACTTCTCCGGCGGTACCTGCTCC
GGCGGTCACGGTCTCTCCATCGGCTCCGTCGGTGGCCGCGACGACAACAC
CGTCAAGAACGTCACTTTCATCGACTCGACTGTCTCCGACTCTGAGAACG
GTGTTCGCATCAAGACCGTCTACGACGCTACTGGTACTGTCGAGGACATC
ACCTACTCCAACATCCAGCTCTCCGGTATTTCCGACTACGGTATCGTCAT
CGAGCAGGACTACGAGAATGGTGACCCCACTGGTACTCCCTCCAACGGTG
TTACCATCTCCGACGTCACCCTCGAGGACATCACTGGCTCGGTTGACTCC
GACGCTGTCGAGATCTACATCCTTTGCGGTGATGGCAGCTGCTCTGACTG
GACCATGTCTGGCATTGACATCACCGGCGGTGAGACCAGCAGCGATTGCG
AGAACGTTCCTTCTGGTGCTTCTTGCGATCAGTAAATGCCTTCTGCCAAG
CCTTTGTTCTGCCTTGCGACCCTGGCCGGTGCCGCTCTGGCTGCTCCTGC
GCCTTCCCGCGTCTCCGACTTCACCAAGCGGTCCACCTGCACCTTCACTG
ATGCGGCCACCGCCTCCGAGAGCAAGACCTCTTGCTCCGACATCGTCCTC
AAGGACATCACCGTCCCTGCTGGTGAGACCCTTAACCTGAAGGACCTCAA
CGACGGCACCACCGTCACCTTCGAGGGAACCACCACCTGGGAGTACGAGG
AGTGGGATGGACCCCTTCTCCGTATCTCCGGTAAGGACATCACCGTGACC
CAGTCCTCCGACGCCGTCCTCGACGGCAACGGCGCCAAGTGGTGGGACGG
TGAGGGAACCAACGGCGGCAAGACCAAGCCCAAGTTCTTCTACGCCCACG
ACCTCGACGACTCCAAGATCTCCGGTCTTTACATCAAGAACACCCCCGTC
CAGGCCATCTCCGTCGAGTCGGACAACCTCGTGATCGAGGACGTCACCAT
CGACAACAGCGACGGTGACTCCGAGGGCGGTCACAACACCGACGGTTTCG
ACATCAGCGAGAGTACCTACATCACCATCACCGGCGCCACCGTCAAGAAC
CAGGACGACTGCGTCGCCATCAACTCTGGTGAGAACATCTACTTCTCCGG
CGGTACCTGCTCCGGCGGTCACGGTCTCTCCATCGGCTCCGTCGGTGGCC
GCGACGACAACACCGTCAAGAACGTCACTTTCATCGACTCGACTGTCTCC
GACTCTGAGAACGGTGTTCGCATCAAGACCGTCTACGACGCTACTGGTAC
TGTCGAGGACATCACCTACTCCAACATCCAGCTCTCCGGTATTTCCGACT
ACGGTATCGTCATCGAGCAGGACTACGAGAATGGTGACCCCACTGGTACT
CCCTCCAACGGTGTTACCATCTCCGACGTCACCCTCGAGGACATCACTGG
CTCGGTTGACTCCGACGCTGTCGAGATCTACATCCTTTGCGGTGATGGCA
GCTGCTCTGACTGGACCATGTCTGGCATTGACATCACCGGCGGTGAGACC
AGCAGCGATTGCGAGAACGTTCCTTCTGGTGCTTCTTGCGATCAGTAAAT
GCCTTCTGCCAAGCCTTTGTTCTGCCTTGCGACCCTGGCCGGTGCCGCTC
TGGCTGCTCCTGCGCCTTCCCGCGTCTCCGACTTCACCAAGCGGTCCACC
TGCACCTTCACTGATGCGGCCACCGCCTCCGAGAGCAAGACCTCTTGCTC
CGACATCGTCCTCAAGGACATCACCGTCCCTGCTGGTGAGACCCTTAACC
TGAAGGACCTCAACGACGGCACCACC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_006763KYF_006763Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_006763-T1KYF_006763-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006763-T1.cdsKYF_006763-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006763-T1.exon2KYF_006763-T1.exon2Aspergillus niger KYF3exon
KYF_006763-T1.exon1KYF_006763-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1693702..1694868 -
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