You are here

Home

KYF_006853-T1, KYF_006853-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_006853-T1
Unique NameKYF_006853-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1987342..1989026+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_006853-T1 ID=KYF_006853-T1|Name=KYF_006853-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1685bp|location=Sequence derived from alignment at ch5:1987342..1989026+ (Aspergillus niger KYF3)
ATGGGAGCAGCAGGCGGCGGTTTCTCCCCCCAAGCCATCAAACAAGTCCC
TCCTGCGGCTCGAGGACTTTACATCTGGTTGGCGATCATCTGGGCCTCGT
ACTGCGGTGGTCTGCATGGTTTTAACACGTCCAATATCTCGGGTGCTATG
CAGATGGAGCAATGGGATCCAGACTTTGGATGGGACAAGCTTTCCAGCAC
GACTGTTTCGAACAATGAGGGCTGGGTGGTATCCTCTATGCTGCTGGTAT
GTGATCTCACACTATATAGCATGAAGTGCATTTACTGAGGCAGTATAACT
TTATGCAGGGCCAAACCGTCGGAGTCTTATTCGCAGGCCCACTAGGGGAA
CGACGGGGCCGAAAGGCAGTCATCCTCGCTGCCGCCATCTGCTACTCGAT
CGGAGCTATTCTCATGGCTGCCAACCTGGGGTCCTTCGCTGAACTCCTGG
TCGGGCGTATTCTTTCCGGATTAGGGTCTGGACTGGGAATGTCAGCAGGA
CCGGTATACATCTCCGAAGTTGCACCCCTCGAGCTGCGCGGAATGATGAC
GACCTTCTACAACGTGAGCATCATGGGCGGCGTTACAGGCAGTTACTGGA
TCAACTACGCCTCGTTGCTCGTCATCCCCGACAGTTCCAGCTGGCAATGG
CGCACCACACTTGTCCTGCAATCCATCCCGGCCATCATCCTCTTCCTCGG
ATTCCCCTTCTTCCCCGAAAGCCCTCGCTACCTCATGATGCGCGGCCACG
TCGACGCTGCCCGGCGCAGCCTGTCCCGCCTGCGCGGCGGCATGGACGAA
AGCACTGAGTACTTCGCCCGCGAATATGCCGAACTCCTCAGCAAGCTCGA
CACCACGTCCACAACAATCACTCCCACGAAAGCCTTCCTATCCCTTCTCC
ACGAATGCATCAATCACCCGCCGACCCGCAAAATCCTCCTCTTCGTCACT
CTCATTCAAACCTTCTTCATCATGAGTGGAGGCAATAGCATCACCTACTA
CGCCCCAAATATACTCGAATCCATCGGCCTTGGCCATTCAGAAGTCCTTC
TCTTCACCGCCATCTACGGCCTCGTCAAGCTCCTCTCCGTACTATTCTAC
GCCTGGTTCCTAACGGAACGCTTCGGCCGGCGTCCTCTCCTGCTGATCGG
CTCCACAATCAACGTCCTCTGTCTGCTGTACCTGACGTGCTATCTTGCCC
TCAGCCCGCCCTCATCGTCAGGAACAGCTTCCCCTTCCGCCGCGTCGTAT
GTTTGCATTGTCGCGATCTGCATCTACGCCATAGGCTACGGCTTCGGCTG
GGCGCCCGTGTTCTCCCTCACAGCGTCGGAGATCTGTCCGACCCGGATAC
GCGGCACGGTAGTGACGCTTGCGTTCACGTACCAGAACCTGCTCAATTTT
GGGATTACGCGCGGGTTCCCCAGTATGACGGAGAGTATGCAGTCCTGGGG
CCCGTTTGCGCTGTTCACGGCGTTCACGACGCTCGCGACGGTGTGGGTGG
GGGTTGGGTTCCCGGAGTGTAAGGGACGGAGTATGGAGAAGATGGAGGAG
GTGTTTACGAGGAGTTGGTGGAAGATAGGGTGGGCGAAGGTGCCGGAAGA
GAGGAGAGTGGAAGATGGTCAGGAGGTGGGTGATGTTGGGGGTGAGGTAG
AGAAGGGAAGCAGTTCCCATGAAGAGAAGGTATAA
back to top

Coding sequence (CDS) from alignment at ch5:1987342..1989026+

>KYF_006853-T1 ID=KYF_006853-T1|Name=KYF_006853-T1|organism=Aspergillus niger KYF3|type=CDS|length=3246bp|location=Sequence derived from alignment at ch5:1987342..1989026+ (Aspergillus niger KYF3)
ATGGGAGCAGCAGGCGGCGGTTTCTCCCCCCAAGCCATCAAACAAGTCCC
TCCTGCGGCTCGAGGACTTTACATCTGGTTGGCGATCATCTGGGCCTCGT
ACTGCGGTGGTCTGCATGGTTTTAACACGTCCAATATCTCGGGTGCTATG
CAGATGGAGCAATGGGATCCAGACTTTGGATGGGACAAGCTTTCCAGCAC
GACTGTTTCGAACAATGAGGGCTGGGTGGTATCCTCTATGCTGCTGGGCC
AAACCGTCGGAGTCTTATTCGCAGGCCCACTAGGGGAACGACGGGGCCGA
AAGGCAGTCATCCTCGCTGCCGCCATCTGCTACTCGATCGGAGCTATTCT
CATGGCTGCCAACCTGGGGTCCTTCGCTGAACTCCTGGTCGGGCGTATTC
TTTCCGGATTAGGGTCTGGACTGGGAATGTCAGCAGGACCGGTATACATC
TCCGAAGTTGCACCCCTCGAGCTGCGCGGAATGATGACGACCTTCTACAA
CGTGAGCATCATGGGCGGCGTTACAGGCAGTTACTGGATCAACTACGCCT
CGTTGCTCGTCATCCCCGACAGTTCCAGCTGGCAATGGCGCACCACACTT
GTCCTGCAATCCATCCCGGCCATCATCCTCTTCCTCGGATTCCCCTTCTT
CCCCGAAAGCCCTCGCTACCTCATGATGCGCGGCCACGTCGACGCTGCCC
GGCGCAGCCTGTCCCGCCTGCGCGGCGGCATGGACGAAAGCACTGAGTAC
TTCGCCCGCGAATATGCCGAACTCCTCAGCAAGCTCGACACCACGTCCAC
AACAATCACTCCCACGAAAGCCTTCCTATCCCTTCTCCACGAATGCATCA
ATCACCCGCCGACCCGCAAAATCCTCCTCTTCGTCACTCTCATTCAAACC
TTCTTCATCATGAGTGGAGGCAATAGCATCACCTACTACGCCCCAAATAT
ACTCGAATCCATCGGCCTTGGCCATTCAGAAGTCCTTCTCTTCACCGCCA
TCTACGGCCTCGTCAAGCTCCTCTCCGTACTATTCTACGCCTGGTTCCTA
ACGGAACGCTTCGGCCGGCGTCCTCTCCTGCTGATCGGCTCCACAATCAA
CGTCCTCTGTCTGCTGTACCTGACGTGCTATCTTGCCCTCAGCCCGCCCT
CATCGTCAGGAACAGCTTCCCCTTCCGCCGCGTCGTATGTTTGCATTGTC
GCGATCTGCATCTACGCCATAGGCTACGGCTTCGGCTGGGCGCCCGTGTT
CTCCCTCACAGCGTCGGAGATCTGTCCGACCCGGATACGCGGCACGGTAG
TGACGCTTGCGTTCACGTACCAGAACCTGCTCAATTTTGGGATTACGCGC
GGGTTCCCCAGTATGACGGAGAGTATGCAGTCCTGGGGCCCGTTTGCGCT
GTTCACGGCGTTCACGACGCTCGCGACGGTGTGGGTGGGGGTTGGGTTCC
CGGAGTGTAAGGGACGGAGTATGGAGAAGATGGAGGAGGTGTTTACGAGG
AGTTGGTGGAAGATAGGGTGGGCGAAGGTGCCGGAAGAGAGGAGAGTGGA
AGATGGTCAGGAGGTGGGTGATGTTGGGGGTGAGGTAGAGAAGGGAAGCA
GTTCCCATGAAGAGAAGGTATAAATGGGAGCAGCAGGCGGCGGTTTCTCC
CCCCAAGCCATCAAACAAGTCCCTCCTGCGGCTCGAGGACTTTACATCTG
GTTGGCGATCATCTGGGCCTCGTACTGCGGTGGTCTGCATGGTTTTAACA
CGTCCAATATCTCGGGTGCTATGCAGATGGAGCAATGGGATCCAGACTTT
GGATGGGACAAGCTTTCCAGCACGACTGTTTCGAACAATGAGGGCTGGGT
GGTATCCTCTATGCTGCTGGGCCAAACCGTCGGAGTCTTATTCGCAGGCC
CACTAGGGGAACGACGGGGCCGAAAGGCAGTCATCCTCGCTGCCGCCATC
TGCTACTCGATCGGAGCTATTCTCATGGCTGCCAACCTGGGGTCCTTCGC
TGAACTCCTGGTCGGGCGTATTCTTTCCGGATTAGGGTCTGGACTGGGAA
TGTCAGCAGGACCGGTATACATCTCCGAAGTTGCACCCCTCGAGCTGCGC
GGAATGATGACGACCTTCTACAACGTGAGCATCATGGGCGGCGTTACAGG
CAGTTACTGGATCAACTACGCCTCGTTGCTCGTCATCCCCGACAGTTCCA
GCTGGCAATGGCGCACCACACTTGTCCTGCAATCCATCCCGGCCATCATC
CTCTTCCTCGGATTCCCCTTCTTCCCCGAAAGCCCTCGCTACCTCATGAT
GCGCGGCCACGTCGACGCTGCCCGGCGCAGCCTGTCCCGCCTGCGCGGCG
GCATGGACGAAAGCACTGAGTACTTCGCCCGCGAATATGCCGAACTCCTC
AGCAAGCTCGACACCACGTCCACAACAATCACTCCCACGAAAGCCTTCCT
ATCCCTTCTCCACGAATGCATCAATCACCCGCCGACCCGCAAAATCCTCC
TCTTCGTCACTCTCATTCAAACCTTCTTCATCATGAGTGGAGGCAATAGC
ATCACCTACTACGCCCCAAATATACTCGAATCCATCGGCCTTGGCCATTC
AGAAGTCCTTCTCTTCACCGCCATCTACGGCCTCGTCAAGCTCCTCTCCG
TACTATTCTACGCCTGGTTCCTAACGGAACGCTTCGGCCGGCGTCCTCTC
CTGCTGATCGGCTCCACAATCAACGTCCTCTGTCTGCTGTACCTGACGTG
CTATCTTGCCCTCAGCCCGCCCTCATCGTCAGGAACAGCTTCCCCTTCCG
CCGCGTCGTATGTTTGCATTGTCGCGATCTGCATCTACGCCATAGGCTAC
GGCTTCGGCTGGGCGCCCGTGTTCTCCCTCACAGCGTCGGAGATCTGTCC
GACCCGGATACGCGGCACGGTAGTGACGCTTGCGTTCACGTACCAGAACC
TGCTCAATTTTGGGATTACGCGCGGGTTCCCCAGTATGACGGAGAGTATG
CAGTCCTGGGGCCCGTTTGCGCTGTTCACGGCGTTCACGACGCTCGCGAC
GGTGTGGGTGGGGGTTGGGTTCCCGGAGTGTAAGGGACGGAGTATGGAGA
AGATGGAGGAGGTGTTTACGAGGAGTTGGTGGAAGATAGGGTGGGCGAAG
GTGCCGGAAGAGAGGAGAGTGGAAGATGGTCAGGAGGTGGGTGATGTTGG
GGGTGAGGTAGAGAAGGGAAGCAGTTCCCATGAAGAGAAGGTATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_006853KYF_006853Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006853-T1.exon1KYF_006853-T1.exon1Aspergillus niger KYF3exon
KYF_006853-T1.exon2KYF_006853-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006853-T1.cdsKYF_006853-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_006853-T1KYF_006853-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1987342..1989026 +
Powered by Drupal