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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2209077..2209716+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_006925-T1 ID=KYF_006925-T1|Name=KYF_006925-T1|organism=Aspergillus niger KYF3|type=mRNA|length=640bp|location=Sequence derived from alignment at ch5:2209077..2209716+ (Aspergillus niger KYF3)
ATGGGTCGCGTCCGTACCAAGGTGAGCATACACGACCGCAATAATGAAGG
AAAGAAAGAATATCAATTCTAACGAAAATGCGCGCGACAATAGACAGTCA
AGCGTTCCGCTAAGGTCGTTATCGAGCGTTACTACCCCAAGTTGACGCTC
GACTTCGAGACCAACAAGCGTATCTGCGATGAGATCGCTATCATTGCCTC
CAAGCGTCTCCGCAACAAGGTTAGTGATTACCATCTTTTTTCTCCCGGAA
ATTCCGGATATAATGGTCAAATGGCAATATACTAATAAGGAATTGGATTT
AGATCGCTGGTTACACCACCCACCTTATGAAGCGTATCCAGCGTGGCCCT
GTCCGCGGTATCTCCTTCAAGCTCCAGGAGGAGGAGCGTGAGCGCAAGGA
TCAGTACGTTCCTGAGGTCTCCGCTCTGGATGTTTCCCAGACCGAGTCCG
GCCAGCTCGACGTCGACTCTGAGACCAAGGACCTGCTCAAGAGCATGGGC
GTAAGTTCTCCCTTATGGAATCTACATTCATGATTTATATCATGTCTAAC
TCGATCGTGCTTTAGTTCGACAACCTCAAGGTCAACGTCATCCCCGTCTC
CCAGCAGCAGGCTCAGGAGCGCCCCCGCCGCTACCGGTAG back to topCoding sequence (CDS) from alignment at ch5:2209077..2209716+ >KYF_006925-T1 ID=KYF_006925-T1|Name=KYF_006925-T1|organism=Aspergillus niger KYF3|type=CDS|length=1680bp|location=Sequence derived from alignment at ch5:2209077..2209716+ (Aspergillus niger KYF3)
ATGGGTCGCGTCCGTACCAAGACAGTCAAGCGTTCCGCTAAGGTCGTTAT
CGAGCGTTACTACCCCAAGTTGACGCTCGACTTCGAGACCAACAAGCGTA
TCTGCGATGAGATCGCTATCATTGCCTCCAAGCGTCTCCGCAACAAGATC
GCTGGTTACACCACCCACCTTATGAAGCGTATCCAGCGTGGCCCTGTCCG
CGGTATCTCCTTCAAGCTCCAGGAGGAGGAGCGTGAGCGCAAGGATCAGT
ACGTTCCTGAGGTCTCCGCTCTGGATGTTTCCCAGACCGAGTCCGGCCAG
CTCGACGTCGACTCTGAGACCAAGGACCTGCTCAAGAGCATGGGCTTCGA
CAACCTCAAGGTCAACGTCATCCCCGTCTCCCAGCAGCAGGCTCAGGAGC
GCCCCCGCCGCTACCGGTAGATGGGTCGCGTCCGTACCAAGACAGTCAAG
CGTTCCGCTAAGGTCGTTATCGAGCGTTACTACCCCAAGTTGACGCTCGA
CTTCGAGACCAACAAGCGTATCTGCGATGAGATCGCTATCATTGCCTCCA
AGCGTCTCCGCAACAAGATCGCTGGTTACACCACCCACCTTATGAAGCGT
ATCCAGCGTGGCCCTGTCCGCGGTATCTCCTTCAAGCTCCAGGAGGAGGA
GCGTGAGCGCAAGGATCAGTACGTTCCTGAGGTCTCCGCTCTGGATGTTT
CCCAGACCGAGTCCGGCCAGCTCGACGTCGACTCTGAGACCAAGGACCTG
CTCAAGAGCATGGGCTTCGACAACCTCAAGGTCAACGTCATCCCCGTCTC
CCAGCAGCAGGCTCAGGAGCGCCCCCGCCGCTACCGGTAGATGGGTCGCG
TCCGTACCAAGACAGTCAAGCGTTCCGCTAAGGTCGTTATCGAGCGTTAC
TACCCCAAGTTGACGCTCGACTTCGAGACCAACAAGCGTATCTGCGATGA
GATCGCTATCATTGCCTCCAAGCGTCTCCGCAACAAGATCGCTGGTTACA
CCACCCACCTTATGAAGCGTATCCAGCGTGGCCCTGTCCGCGGTATCTCC
TTCAAGCTCCAGGAGGAGGAGCGTGAGCGCAAGGATCAGTACGTTCCTGA
GGTCTCCGCTCTGGATGTTTCCCAGACCGAGTCCGGCCAGCTCGACGTCG
ACTCTGAGACCAAGGACCTGCTCAAGAGCATGGGCTTCGACAACCTCAAG
GTCAACGTCATCCCCGTCTCCCAGCAGCAGGCTCAGGAGCGCCCCCGCCG
CTACCGGTAGATGGGTCGCGTCCGTACCAAGACAGTCAAGCGTTCCGCTA
AGGTCGTTATCGAGCGTTACTACCCCAAGTTGACGCTCGACTTCGAGACC
AACAAGCGTATCTGCGATGAGATCGCTATCATTGCCTCCAAGCGTCTCCG
CAACAAGATCGCTGGTTACACCACCCACCTTATGAAGCGTATCCAGCGTG
GCCCTGTCCGCGGTATCTCCTTCAAGCTCCAGGAGGAGGAGCGTGAGCGC
AAGGATCAGTACGTTCCTGAGGTCTCCGCTCTGGATGTTTCCCAGACCGA
GTCCGGCCAGCTCGACGTCGACTCTGAGACCAAGGACCTGCTCAAGAGCA
TGGGCTTCGACAACCTCAAGGTCAACGTCATCCCCGTCTCCCAGCAGCAG
GCTCAGGAGCGCCCCCGCCGCTACCGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018273 |
| DBxref | InterPro:IPR036401 |
| DBxref | InterPro:IPR001210 |
| DBxref | PFAM:PF00833 |
| Product | 40S ribosomal protein S17 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2209077..2209716 + |
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