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KYF_006934-T1, KYF_006934-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_006934-T1
Unique NameKYF_006934-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2228832..2229665-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_006934-T1 ID=KYF_006934-T1|Name=KYF_006934-T1|organism=Aspergillus niger KYF3|type=mRNA|length=834bp|location=Sequence derived from alignment at ch5:2228832..2229665- (Aspergillus niger KYF3)
ATGACTCTCGCCGAGGAGCTCCGCTCGAGAAACTTCAGTACGGACTTGCC
TTGTTTACCTGATTTATTCTTTGACATGCGAAGCAAGGGATAACTAACAA
CTCATCACTTAGGTATCTACGGACAATGGTTTGTACCGCTCTTCTCTGTT
CCCTTTCTCGCCCGCTGCTGCTCAACTGTGCGCCTTTGCAACATTTGCGA
AAACAAATCATGGTTGCCTGGATCTTCAGCGCTTGGCGCTGTCATGAAAG
GACCTCCATCAGTTGCCGCCTTGGGCAACCGTGTACTCTGAATGATTGCG
CATAAATTTTGGGGGACTGCGACAACAATGGAGCAATAATTATGGCGTCT
ACCGGACTAGTTTGCTAATCGATATCTGACGTAGGACGGGCGTGATCTGC
ATCGTCTTGTGCTTGGCTCTCGGTATCGCCAACATCTTCTCGTTCGACGT
CGTGATCATCATCTTTAGTGTTCTGTGCCTGTGAGTACTCACCTGAATTT
CTTACACTGGTCTCAGACGCTTACAATACACAGCATCTCTGGTTTGATCC
TCATCTTCGCCGAAGTGCCCTTCCTCCTCAGAATATGCCCCACATCACCG
AAGTTCGATGCATTTATCCGACGCTTCACCACAAACTGGATGCGCGCTGC
AATGTATACAGTGATGAGTGTTGTGCAATGGCTTAGTCTTATCAAGTCCG
CTACCAGTTTGATTGCGGCTGCCGTCTTCCTACTCATTGCCGGTTTATTC
TATGCGCTGGCGGGTCTCAAGAGCCAGGAATTCGTCGGCAGCAAGACTTT
GGGCGGCCAAGGTCTTGCGCAGATGATCGTTTAA
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Coding sequence (CDS) from alignment at ch5:2228832..2229665-

>KYF_006934-T1 ID=KYF_006934-T1|Name=KYF_006934-T1|organism=Aspergillus niger KYF3|type=CDS|length=1800bp|location=Sequence derived from alignment at ch5:2228832..2229665- (Aspergillus niger KYF3)
CATCTCTGGTTTGATCCTCATCTTCGCCGAAGTGCCCTTCCTCCTCAGAA
TATGCCCCACATCACCGAAGTTCGATGCATTTATCCGACGCTTCACCACA
AACTGGATGCGCGCTGCAATGTATACAGTGATGAGTGTTGTGCAATGGCT
TAGTCTTATCAAGTCCGCTACCAGTTTGATTGCGGCTGCCGTCTTCCTAC
TCATTGCCGGTTTATTCTATGCGCTGGCGGGTCTCAAGAGCCAGGAATTC
GTCGGCAGCAAGACTTTGGGCGGCCAAGGTCTTGCGCAGATGATCGTTTA
AGACGGGCGTGATCTGCATCGTCTTGTGCTTGGCTCTCGGTATCGCCAAC
ATCTTCTCGTTCGACGTCGTGATCATCATCTTTAGTGTTCTGTGCCTGTA
TCTACGGACAATGATGACTCTCGCCGAGGAGCTCCGCTCGAGAAACTTCA
CATCTCTGGTTTGATCCTCATCTTCGCCGAAGTGCCCTTCCTCCTCAGAA
TATGCCCCACATCACCGAAGTTCGATGCATTTATCCGACGCTTCACCACA
AACTGGATGCGCGCTGCAATGTATACAGTGATGAGTGTTGTGCAATGGCT
TAGTCTTATCAAGTCCGCTACCAGTTTGATTGCGGCTGCCGTCTTCCTAC
TCATTGCCGGTTTATTCTATGCGCTGGCGGGTCTCAAGAGCCAGGAATTC
GTCGGCAGCAAGACTTTGGGCGGCCAAGGTCTTGCGCAGATGATCGTTTA
AGACGGGCGTGATCTGCATCGTCTTGTGCTTGGCTCTCGGTATCGCCAAC
ATCTTCTCGTTCGACGTCGTGATCATCATCTTTAGTGTTCTGTGCCTGTA
TCTACGGACAATGATGACTCTCGCCGAGGAGCTCCGCTCGAGAAACTTCA
CATCTCTGGTTTGATCCTCATCTTCGCCGAAGTGCCCTTCCTCCTCAGAA
TATGCCCCACATCACCGAAGTTCGATGCATTTATCCGACGCTTCACCACA
AACTGGATGCGCGCTGCAATGTATACAGTGATGAGTGTTGTGCAATGGCT
TAGTCTTATCAAGTCCGCTACCAGTTTGATTGCGGCTGCCGTCTTCCTAC
TCATTGCCGGTTTATTCTATGCGCTGGCGGGTCTCAAGAGCCAGGAATTC
GTCGGCAGCAAGACTTTGGGCGGCCAAGGTCTTGCGCAGATGATCGTTTA
AGACGGGCGTGATCTGCATCGTCTTGTGCTTGGCTCTCGGTATCGCCAAC
ATCTTCTCGTTCGACGTCGTGATCATCATCTTTAGTGTTCTGTGCCTGTA
TCTACGGACAATGATGACTCTCGCCGAGGAGCTCCGCTCGAGAAACTTCA
CATCTCTGGTTTGATCCTCATCTTCGCCGAAGTGCCCTTCCTCCTCAGAA
TATGCCCCACATCACCGAAGTTCGATGCATTTATCCGACGCTTCACCACA
AACTGGATGCGCGCTGCAATGTATACAGTGATGAGTGTTGTGCAATGGCT
TAGTCTTATCAAGTCCGCTACCAGTTTGATTGCGGCTGCCGTCTTCCTAC
TCATTGCCGGTTTATTCTATGCGCTGGCGGGTCTCAAGAGCCAGGAATTC
GTCGGCAGCAAGACTTTGGGCGGCCAAGGTCTTGCGCAGATGATCGTTTA
AGACGGGCGTGATCTGCATCGTCTTGTGCTTGGCTCTCGGTATCGCCAAC
ATCTTCTCGTTCGACGTCGTGATCATCATCTTTAGTGTTCTGTGCCTGTA
TCTACGGACAATGATGACTCTCGCCGAGGAGCTCCGCTCGAGAAACTTCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TVP18KYF_006934Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_006934-T1KYF_006934-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006934-T1.cdsKYF_006934-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006934-T1.exon4KYF_006934-T1.exon4Aspergillus niger KYF3exon
KYF_006934-T1.exon3KYF_006934-T1.exon3Aspergillus niger KYF3exon
KYF_006934-T1.exon2KYF_006934-T1.exon2Aspergillus niger KYF3exon
KYF_006934-T1.exon1KYF_006934-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR019365
DBxrefPFAM:PF10233
ProductGolgi apparatus membrane protein tvp18
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2228832..2229665 -
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