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KYF_007016-T1, KYF_007016-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_007016-T1
Unique NameKYF_007016-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2485760..2488108-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_007016-T1 ID=KYF_007016-T1|Name=KYF_007016-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2349bp|location=Sequence derived from alignment at ch5:2485760..2488108- (Aspergillus niger KYF3)
ATGGATTCCACAGCGGATTTTGGCTCGTTACAGCAACGGGTGCAGTCGTC
CCTGATGCAGGTGACGCGCACTGCCGGTCAACTTTCAGCCGAAGATCTCG
ATTTCCATCGCACCTCTAACGCAGAGGTTTCTGATTCCCTGGACGAGCAG
AGCAACCGACTCTTGTCGCTCACTTCTTCTATTTTGAAAGCCGCCACCGC
CGGAACCGATGTTTCTGCACCGACCTTAGACGACGAAGATTCCCTCGAAG
ATAATTGGCGCGGCGTCGTGGATGTCATCGATGCGCTATTGGAAAAGGCC
GACGCATGCTTGGATGAATTCACCGGTGTTATTAAGAAATTGAGCCCGTC
GCAACAGGATCAAGCTGCCGCTGCCGCTGCGAAGGCTTCGAAGAAGCAAC
CCGCCAAATTCCCGACCATTTACGACTACGGCCCGTCGAAGATCCCGAAG
CCGCAATTGCTGTTCGAACGCAAGGCCGATAACACCGATACCGCGCCTTT
CAAGCCTTTGCTTAAGACGAAGCCTCATGCCGTTGTTCCGCTGAAAGACT
CGTTAAAGTTGTCCGATTCCGCTGTCGGATATGTCAACCCGTACGAGAAG
GAGATTCGTGCCGCAAAGTTCCCCACTTCTTCCTACAGCGTGTCGCCGCC
TGTGGATTATCAGCCGTGGGAGTCGACAAAGGCGACTTTTGTGGATACTC
TGGAGGGAGTGAAGGAGATGTTGGAGGAACTTAAGGCCGCGAAGGAGATC
GCGATTGATTTGGAGCATCACGATGTGCACTCGTATCAGGGTCTTGTCTC
CTTGATGCAGATCAGCACTCGGGATAAGGATTGGGTTGTTGATACGCTTA
AGCCGTGGAGGGAGGAGCTGCAAGTTCTTAACGAAGTGTTCACGGATCCC
AACATCTTGAAGGTGCTTCACGGTTCCTCGATGGATATTATCTGGCTTCA
GCGCGACTTGGGGCTGTACGTCGTTGGCATGTTCGATACATACCATGCTG
CTTGCGCGTTGAACTACCCCAAGCGCAGTTTGAAGTTCCTGCTGCAGAAG
TTTGTCAACTTCGAAGCCGATAAACGTTACCAGATGGCCGACTGGCGCAT
TCGACCGATCCCGGAAGGCATGTTCGATTACGCTCGTTCGGATACTCACT
ACCTTCTTCACATCTACGACCACATTCGCAACGAACTTGTCGAAAACTCC
CTCCCCGACAACAACCTTATCGACTACGTCCTGGAGCAGTCTAAGAAGGA
AGCTCTGCAAGTATATGAGCGTCCTGTTTACGATGCTGCTACTGGTCAAG
GACCGGGTGGTTGGTACGACCTCCTTTCTCGCAATTCGGTCGTGGTCAAC
AGGGAACAGTTTGCCGTATTCAAAGCAGTACATCAGTGGCGTGACGAGGT
TGCTAGAGAGGAAGACGAGGGCGTGCAATGCGTGTTCCCGAAACACGTTC
TCTTCAGGGTTGCTCACACTATGCCGCTCGACTTGGGCACCCTGTTCCGG
ACATTGTCACCTGTGACACCAATTGTCCAAAACCGCGCTGTAGACCTTTT
GGAAGTCATCAAGAAGGCTAAGGATGAGGGCGCTGATGGCCCTGAATGGC
GTGACGTCTACGTCAAGCCAACCAGGGGTACACCGGCCGCGCCGGCGACA
CAGCCAGTCGATGTCCCGTCCCCGACCCCAGCAGACGAGGCCAATCTCCC
CACTGTTTCTCGCTACGAGGTCTCCCAATTCTGGGGTTCCGTGTTGGAGT
CACAAGAACCTCCCACGGTCCCTGCATACTCCGCCGTTGCTTCAGCCGAA
GCTCTCCGTCTCTCCCTCCCCCTTCCGCCTATGCCTAAAACCGTCTCCGA
AGCCCGCGAAAAGCTCGCACCCGCTCAACCTCAAACCCCGAAACCCGCTA
CCTCTGCACCCGCCGTTAAGGAAGAGAAGAAAGAGGACGAGAACAAGTAC
TTCACCGTCAAGGAAATGGGTGGACCACGTAAGCGCAAGGCCGCCCCCGC
AGAGACGGCCGAGCAATTGCAGTCCGCCTCATCGGATTTCGACACCACTG
ACGCCAGTTCCTCGTTGGACACTGAAGATAAGCCATCCAAGAAACAGCGC
CGCAAGGAGAAGAAGAACAAGCCCGCAGCACAACCCGAGACAGCTGCCGA
GGAGGACGGAGAAGAGGAGGAAGAGGAGGCTCCCTTCAACTACGAGTCCG
CTGCCTCTGTATTCAATGCCAACCCCAAGGCTACTTCGGGACTCCCGTCC
AGGCGTCGTTATAATCCCTATGCTAAGGTGCTCGATGCCCCGTCGGGAGT
GCGGAAGCAGAAACGCGAGACTGCCGGAAAGGCGTTTACGTTCCGGTGA
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Coding sequence (CDS) from alignment at ch5:2485760..2488108-

>KYF_007016-T1 ID=KYF_007016-T1|Name=KYF_007016-T1|organism=Aspergillus niger KYF3|type=CDS|length=2349bp|location=Sequence derived from alignment at ch5:2485760..2488108- (Aspergillus niger KYF3)
ATGGATTCCACAGCGGATTTTGGCTCGTTACAGCAACGGGTGCAGTCGTC
CCTGATGCAGGTGACGCGCACTGCCGGTCAACTTTCAGCCGAAGATCTCG
ATTTCCATCGCACCTCTAACGCAGAGGTTTCTGATTCCCTGGACGAGCAG
AGCAACCGACTCTTGTCGCTCACTTCTTCTATTTTGAAAGCCGCCACCGC
CGGAACCGATGTTTCTGCACCGACCTTAGACGACGAAGATTCCCTCGAAG
ATAATTGGCGCGGCGTCGTGGATGTCATCGATGCGCTATTGGAAAAGGCC
GACGCATGCTTGGATGAATTCACCGGTGTTATTAAGAAATTGAGCCCGTC
GCAACAGGATCAAGCTGCCGCTGCCGCTGCGAAGGCTTCGAAGAAGCAAC
CCGCCAAATTCCCGACCATTTACGACTACGGCCCGTCGAAGATCCCGAAG
CCGCAATTGCTGTTCGAACGCAAGGCCGATAACACCGATACCGCGCCTTT
CAAGCCTTTGCTTAAGACGAAGCCTCATGCCGTTGTTCCGCTGAAAGACT
CGTTAAAGTTGTCCGATTCCGCTGTCGGATATGTCAACCCGTACGAGAAG
GAGATTCGTGCCGCAAAGTTCCCCACTTCTTCCTACAGCGTGTCGCCGCC
TGTGGATTATCAGCCGTGGGAGTCGACAAAGGCGACTTTTGTGGATACTC
TGGAGGGAGTGAAGGAGATGTTGGAGGAACTTAAGGCCGCGAAGGAGATC
GCGATTGATTTGGAGCATCACGATGTGCACTCGTATCAGGGTCTTGTCTC
CTTGATGCAGATCAGCACTCGGGATAAGGATTGGGTTGTTGATACGCTTA
AGCCGTGGAGGGAGGAGCTGCAAGTTCTTAACGAAGTGTTCACGGATCCC
AACATCTTGAAGGTGCTTCACGGTTCCTCGATGGATATTATCTGGCTTCA
GCGCGACTTGGGGCTGTACGTCGTTGGCATGTTCGATACATACCATGCTG
CTTGCGCGTTGAACTACCCCAAGCGCAGTTTGAAGTTCCTGCTGCAGAAG
TTTGTCAACTTCGAAGCCGATAAACGTTACCAGATGGCCGACTGGCGCAT
TCGACCGATCCCGGAAGGCATGTTCGATTACGCTCGTTCGGATACTCACT
ACCTTCTTCACATCTACGACCACATTCGCAACGAACTTGTCGAAAACTCC
CTCCCCGACAACAACCTTATCGACTACGTCCTGGAGCAGTCTAAGAAGGA
AGCTCTGCAAGTATATGAGCGTCCTGTTTACGATGCTGCTACTGGTCAAG
GACCGGGTGGTTGGTACGACCTCCTTTCTCGCAATTCGGTCGTGGTCAAC
AGGGAACAGTTTGCCGTATTCAAAGCAGTACATCAGTGGCGTGACGAGGT
TGCTAGAGAGGAAGACGAGGGCGTGCAATGCGTGTTCCCGAAACACGTTC
TCTTCAGGGTTGCTCACACTATGCCGCTCGACTTGGGCACCCTGTTCCGG
ACATTGTCACCTGTGACACCAATTGTCCAAAACCGCGCTGTAGACCTTTT
GGAAGTCATCAAGAAGGCTAAGGATGAGGGCGCTGATGGCCCTGAATGGC
GTGACGTCTACGTCAAGCCAACCAGGGGTACACCGGCCGCGCCGGCGACA
CAGCCAGTCGATGTCCCGTCCCCGACCCCAGCAGACGAGGCCAATCTCCC
CACTGTTTCTCGCTACGAGGTCTCCCAATTCTGGGGTTCCGTGTTGGAGT
CACAAGAACCTCCCACGGTCCCTGCATACTCCGCCGTTGCTTCAGCCGAA
GCTCTCCGTCTCTCCCTCCCCCTTCCGCCTATGCCTAAAACCGTCTCCGA
AGCCCGCGAAAAGCTCGCACCCGCTCAACCTCAAACCCCGAAACCCGCTA
CCTCTGCACCCGCCGTTAAGGAAGAGAAGAAAGAGGACGAGAACAAGTAC
TTCACCGTCAAGGAAATGGGTGGACCACGTAAGCGCAAGGCCGCCCCCGC
AGAGACGGCCGAGCAATTGCAGTCCGCCTCATCGGATTTCGACACCACTG
ACGCCAGTTCCTCGTTGGACACTGAAGATAAGCCATCCAAGAAACAGCGC
CGCAAGGAGAAGAAGAACAAGCCCGCAGCACAACCCGAGACAGCTGCCGA
GGAGGACGGAGAAGAGGAGGAAGAGGAGGCTCCCTTCAACTACGAGTCCG
CTGCCTCTGTATTCAATGCCAACCCCAAGGCTACTTCGGGACTCCCGTCC
AGGCGTCGTTATAATCCCTATGCTAAGGTGCTCGATGCCCCGTCGGGAGT
GCGGAAGCAGAAACGCGAGACTGCCGGAAAGGCGTTTACGTTCCGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000176nuclear exosome (RNase complex)
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
GO:0003676nucleic acid binding
GO:00084083'-5' exonuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
GO:0006396RNA processing
GO:0006139nucleobase-containing compound metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_007016KYF_007016Aspergillus niger KYF3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_007016-T1.cdsKYF_007016-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_007016-T1.exon1KYF_007016-T1.exon1Aspergillus niger KYF3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_007016-T1KYF_007016-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926158Y
DBxrefInterPro:IPR010997
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR012588
DBxrefInterPro:IPR002121
DBxrefInterPro:IPR002562
DBxrefPFAM:PF08066
DBxrefPFAM:PF00570
DBxrefPFAM:PF01612
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2485760..2488108 -
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