You are here

Home

KYF_007247-T1, KYF_007247-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_007247-T1
Unique NameKYF_007247-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:3125114..3127175+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_007247-T1 ID=KYF_007247-T1|Name=KYF_007247-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2062bp|location=Sequence derived from alignment at ch5:3125114..3127175+ (Aspergillus niger KYF3)
ATGGATGATTTATCCCACCCGGCGCAAGCAACTGCATCATCCCAGACCAC
GTATCCCCGTAGCTGCATCCCCTGCAATCGCAGAAAGCTCCGATGCGACC
GGAAATTTCCCTGCGGCCGGTGTGTGAAGGGCGGCGAGCAATGTGTCTTT
CCGGGTCCCAAGCGAGCGCCCCGACAGCTCAAACGGCCTCCCATCGCGGA
GGTGTTGGCCCAGCTGCGACAGCTAGAGCAAGAGGTCCAGCTCCTGCGCG
CTCAAGCTCAGCAACCCGCGGAGGCTGGAGCGTCTCCACTCGGCCATCCT
CTGGAGGAGGCCGCTGGTCCACTGGAGCCAGGCGAGCGGGAAGGCAGGCT
AGTTGTCAAGGAAGGTAAGAGTCGTTATGTGGGGGATGCTCCCTCGGCTG
TGCTGGGGGATAAGGTTAGATCAACTTTCCTCGTCTGATACTTGTTCCTT
CTCCCAACAAGAGCCCTGACGGGTGTGTTCGTGACTATTATAGATCCGAG
AACTACAGGATATCTGTGATGCATCATCCTCCGAGGATGAACTGGAGACC
CCAGAGACATCCGGCTTGCACTTCGCCAGTAGCCTCGGGGGCAACTGGCG
CAATCACAGTTTACGGGACACCTATCTCCAGCCAGATCAGATGCAGCGCT
TATGGCAAGTCTACCAAGACAATGTGGCACCGTTACTCGCCGTTCTACAT
GTACCTTCCGTGGAGATCATGGTACGCGAAGAATCCGAGAACATCAATCC
GGACCCTGCCCGCGAAGCACTCATTCTCGCCGTCTGCTTCGCTGCCATCG
TAACCATACCCCCAGACCAGTGCATGACCTTGGTGGGTATGGATTGCGAA
AAGGCCATCCAGAGCTATCAGCTCGACGTGGACCAGGCGTTGGTACGAGC
CAACTTCATCAAGTCCCAGAATATCTGCGTCTTGCAAGCTGCGGTGATCT
TCTTGCTCTGTCTCCGTTGGAGAGGCGATGCGAGACTCGTCTGGGCGGCG
TCTGCCGTTGTGGTTCGCGTGGCTCAGGGACAGGGCATTCATCGCGACGG
TCAAAGCCTTGGACTCAGCCCATTTGACTCGGAAATGCGACGTCGCTTAT
GGTGGCACATCTGTCTTCTGGATATGGTGTGCTCTGAGGAGCAAGGGACC
GACACCCAAATCCAGCCAGGCATGTTTGACACTCGTCTCCCCCATAACAT
CGACGGGGCAGATCTGGACCCATCCATGACCGAGCTGCCACCGGAGAAGA
CTGGTGCCACCGATATCACCCTCCTCATAATCCAGTGCGACATCATCTCG
GAACTTAACTGGCCGAATCGGCGTAACGGTGGTGCAAGAGATGCACAATC
CACCGCTGATCAGGAACCGCTCGTTACCACCGTAGCGAACCGTCTGGAAG
GTCGCTTTTTGCAACACTTGGACATGAACATCCCAATTCAATGGGTATAC
GCCATGATTATCCGGCTTACCCTGTCAAAACTGTGGCTATACGCCCATTA
CAACAAAATGGCCAGCCATGAGTCTCGATCCGGATGGTCGCAAGCCGCCT
GCGATGATGCCTTTCAAGCGGCCGTCGAAACGATCAAATTCACCATTCTG
CTGCATACGAACGAGAGTACTTCGCAATGGGCGTGGCTATGCAAGACCTA
TAAGCAGTGGCACACGGTCGCGTTCATCCTCGCGGAGCTGTGCAACCGCC
CTATCACGGCCGAGACCGACCATGCCTGGCAGGTGGTGACGGAGATCCAG
CGGCAATGGGAACAAGATGGCTCGCCCCAGAGTGTCATGCTCCGGAAGCC
CCTCAAGCGCTTGATGCAACGGACGGCATCGACCAGGGCGGCCAAGATGG
GGATATCGCCAGGCTCCTCACTGGGCACGGAGGTTAAGGATGATGATAGC
ATCGGGTCGGGTTTGATGTCCTTTAATACAAACCCTCTGCCAGGTATGGA
TTTCTCTCAGGTATCCCTGGGTCAAGGATCTCTTCCCCCGGATGCGTATT
CACTGGGGATGGCTGGTTTTGGTGTTTCGGGCATGGAGTGGCTGTGGGAG
CCATTGCTGTGA
back to top

Coding sequence (CDS) from alignment at ch5:3125114..3127175+

>KYF_007247-T1 ID=KYF_007247-T1|Name=KYF_007247-T1|organism=Aspergillus niger KYF3|type=CDS|length=3966bp|location=Sequence derived from alignment at ch5:3125114..3127175+ (Aspergillus niger KYF3)
ATGGATGATTTATCCCACCCGGCGCAAGCAACTGCATCATCCCAGACCAC
GTATCCCCGTAGCTGCATCCCCTGCAATCGCAGAAAGCTCCGATGCGACC
GGAAATTTCCCTGCGGCCGGTGTGTGAAGGGCGGCGAGCAATGTGTCTTT
CCGGGTCCCAAGCGAGCGCCCCGACAGCTCAAACGGCCTCCCATCGCGGA
GGTGTTGGCCCAGCTGCGACAGCTAGAGCAAGAGGTCCAGCTCCTGCGCG
CTCAAGCTCAGCAACCCGCGGAGGCTGGAGCGTCTCCACTCGGCCATCCT
CTGGAGGAGGCCGCTGGTCCACTGGAGCCAGGCGAGCGGGAAGGCAGGCT
AGTTGTCAAGGAAGGTAAGAGTCGTTATGTGGGGGATGCTCCCTCGGCTG
TGCTGGGGGATAAGATCCGAGAACTACAGGATATCTGTGATGCATCATCC
TCCGAGGATGAACTGGAGACCCCAGAGACATCCGGCTTGCACTTCGCCAG
TAGCCTCGGGGGCAACTGGCGCAATCACAGTTTACGGGACACCTATCTCC
AGCCAGATCAGATGCAGCGCTTATGGCAAGTCTACCAAGACAATGTGGCA
CCGTTACTCGCCGTTCTACATGTACCTTCCGTGGAGATCATGGTACGCGA
AGAATCCGAGAACATCAATCCGGACCCTGCCCGCGAAGCACTCATTCTCG
CCGTCTGCTTCGCTGCCATCGTAACCATACCCCCAGACCAGTGCATGACC
TTGGTGGGTATGGATTGCGAAAAGGCCATCCAGAGCTATCAGCTCGACGT
GGACCAGGCGTTGGTACGAGCCAACTTCATCAAGTCCCAGAATATCTGCG
TCTTGCAAGCTGCGGTGATCTTCTTGCTCTGTCTCCGTTGGAGAGGCGAT
GCGAGACTCGTCTGGGCGGCGTCTGCCGTTGTGGTTCGCGTGGCTCAGGG
ACAGGGCATTCATCGCGACGGTCAAAGCCTTGGACTCAGCCCATTTGACT
CGGAAATGCGACGTCGCTTATGGTGGCACATCTGTCTTCTGGATATGGTG
TGCTCTGAGGAGCAAGGGACCGACACCCAAATCCAGCCAGGCATGTTTGA
CACTCGTCTCCCCCATAACATCGACGGGGCAGATCTGGACCCATCCATGA
CCGAGCTGCCACCGGAGAAGACTGGTGCCACCGATATCACCCTCCTCATA
ATCCAGTGCGACATCATCTCGGAACTTAACTGGCCGAATCGGCGTAACGG
TGGTGCAAGAGATGCACAATCCACCGCTGATCAGGAACCGCTCGTTACCA
CCGTAGCGAACCGTCTGGAAGGTCGCTTTTTGCAACACTTGGACATGAAC
ATCCCAATTCAATGGGTATACGCCATGATTATCCGGCTTACCCTGTCAAA
ACTGTGGCTATACGCCCATTACAACAAAATGGCCAGCCATGAGTCTCGAT
CCGGATGGTCGCAAGCCGCCTGCGATGATGCCTTTCAAGCGGCCGTCGAA
ACGATCAAATTCACCATTCTGCTGCATACGAACGAGAGTACTTCGCAATG
GGCGTGGCTATGCAAGACCTATAAGCAGTGGCACACGGTCGCGTTCATCC
TCGCGGAGCTGTGCAACCGCCCTATCACGGCCGAGACCGACCATGCCTGG
CAGGTGGTGACGGAGATCCAGCGGCAATGGGAACAAGATGGCTCGCCCCA
GAGTGTCATGCTCCGGAAGCCCCTCAAGCGCTTGATGCAACGGACGGCAT
CGACCAGGGCGGCCAAGATGGGGATATCGCCAGGCTCCTCACTGGGCACG
GAGGTTAAGGATGATGATAGCATCGGGTCGGGTTTGATGTCCTTTAATAC
AAACCCTCTGCCAGGTATGGATTTCTCTCAGGTATCCCTGGGTCAAGGAT
CTCTTCCCCCGGATGCGTATTCACTGGGGATGGCTGGTTTTGGTGTTTCG
GGCATGGAGTGGCTGTGGGAGCCATTGCTGTGAATGGATGATTTATCCCA
CCCGGCGCAAGCAACTGCATCATCCCAGACCACGTATCCCCGTAGCTGCA
TCCCCTGCAATCGCAGAAAGCTCCGATGCGACCGGAAATTTCCCTGCGGC
CGGTGTGTGAAGGGCGGCGAGCAATGTGTCTTTCCGGGTCCCAAGCGAGC
GCCCCGACAGCTCAAACGGCCTCCCATCGCGGAGGTGTTGGCCCAGCTGC
GACAGCTAGAGCAAGAGGTCCAGCTCCTGCGCGCTCAAGCTCAGCAACCC
GCGGAGGCTGGAGCGTCTCCACTCGGCCATCCTCTGGAGGAGGCCGCTGG
TCCACTGGAGCCAGGCGAGCGGGAAGGCAGGCTAGTTGTCAAGGAAGGTA
AGAGTCGTTATGTGGGGGATGCTCCCTCGGCTGTGCTGGGGGATAAGATC
CGAGAACTACAGGATATCTGTGATGCATCATCCTCCGAGGATGAACTGGA
GACCCCAGAGACATCCGGCTTGCACTTCGCCAGTAGCCTCGGGGGCAACT
GGCGCAATCACAGTTTACGGGACACCTATCTCCAGCCAGATCAGATGCAG
CGCTTATGGCAAGTCTACCAAGACAATGTGGCACCGTTACTCGCCGTTCT
ACATGTACCTTCCGTGGAGATCATGGTACGCGAAGAATCCGAGAACATCA
ATCCGGACCCTGCCCGCGAAGCACTCATTCTCGCCGTCTGCTTCGCTGCC
ATCGTAACCATACCCCCAGACCAGTGCATGACCTTGGTGGGTATGGATTG
CGAAAAGGCCATCCAGAGCTATCAGCTCGACGTGGACCAGGCGTTGGTAC
GAGCCAACTTCATCAAGTCCCAGAATATCTGCGTCTTGCAAGCTGCGGTG
ATCTTCTTGCTCTGTCTCCGTTGGAGAGGCGATGCGAGACTCGTCTGGGC
GGCGTCTGCCGTTGTGGTTCGCGTGGCTCAGGGACAGGGCATTCATCGCG
ACGGTCAAAGCCTTGGACTCAGCCCATTTGACTCGGAAATGCGACGTCGC
TTATGGTGGCACATCTGTCTTCTGGATATGGTGTGCTCTGAGGAGCAAGG
GACCGACACCCAAATCCAGCCAGGCATGTTTGACACTCGTCTCCCCCATA
ACATCGACGGGGCAGATCTGGACCCATCCATGACCGAGCTGCCACCGGAG
AAGACTGGTGCCACCGATATCACCCTCCTCATAATCCAGTGCGACATCAT
CTCGGAACTTAACTGGCCGAATCGGCGTAACGGTGGTGCAAGAGATGCAC
AATCCACCGCTGATCAGGAACCGCTCGTTACCACCGTAGCGAACCGTCTG
GAAGGTCGCTTTTTGCAACACTTGGACATGAACATCCCAATTCAATGGGT
ATACGCCATGATTATCCGGCTTACCCTGTCAAAACTGTGGCTATACGCCC
ATTACAACAAAATGGCCAGCCATGAGTCTCGATCCGGATGGTCGCAAGCC
GCCTGCGATGATGCCTTTCAAGCGGCCGTCGAAACGATCAAATTCACCAT
TCTGCTGCATACGAACGAGAGTACTTCGCAATGGGCGTGGCTATGCAAGA
CCTATAAGCAGTGGCACACGGTCGCGTTCATCCTCGCGGAGCTGTGCAAC
CGCCCTATCACGGCCGAGACCGACCATGCCTGGCAGGTGGTGACGGAGAT
CCAGCGGCAATGGGAACAAGATGGCTCGCCCCAGAGTGTCATGCTCCGGA
AGCCCCTCAAGCGCTTGATGCAACGGACGGCATCGACCAGGGCGGCCAAG
ATGGGGATATCGCCAGGCTCCTCACTGGGCACGGAGGTTAAGGATGATGA
TAGCATCGGGTCGGGTTTGATGTCCTTTAATACAAACCCTCTGCCAGGTA
TGGATTTCTCTCAGGTATCCCTGGGTCAAGGATCTCTTCCCCCGGATGCG
TATTCACTGGGGATGGCTGGTTTTGGTGTTTCGGGCATGGAGTGGCTGTG
GGAGCCATTGCTGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677DNA binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_007247KYF_007247Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_007247-T1.exon1KYF_007247-T1.exon1Aspergillus niger KYF3exon
KYF_007247-T1.exon2KYF_007247-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_007247-T1.cdsKYF_007247-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_007247-T1KYF_007247-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:3125114..3127175 +
Powered by Drupal