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KYF_007287-T1, KYF_007287-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_007287-T1
Unique NameKYF_007287-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:3237033..3238254+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_007287-T1 ID=KYF_007287-T1|Name=KYF_007287-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1222bp|location=Sequence derived from alignment at ch5:3237033..3238254+ (Aspergillus niger KYF3)
ATGACTGTCCAACAACCACGACTTGAAATCAATGGCTCAGACGAGGAGAA
TACCATGAAAAACGTGAAGACCATATTGGTTACTGGAGGCGCCGGTTTTA
TGTGAGTCTATTACTGTGGCTATGGTTATTGGAGTTTCAAAGACACAGAT
AGGTAAACTAACACTGCTTGGTCAGTGGAGGCTGGTTCGTTCGACACCTC
CTTCAGGTATACGGAACGAAATATACGGTACTCTGTTTTGATATCCTCGA
TTACTGCGCATCTAAGCGCAACTTTCAACCCGTTGAACATTTGCCTAACT
TCCACTTCTTTCCGGGGGATCTGTGCGACCGCGACAGAGTGACTGCTCTC
TTCCAGCAGTTCAAAGTGGATGCAGTTGTCCACTTCGCGGCCAATTCTCA
TGTGGATCAATCTCTAGTTAACCCGCTCTCTTTCACTCGGAGCAACGTCA
CAGGGACCCATGTCCTTCTGGAAGCAGCACGCCAAGCTGGGACAGTAATA
AGGTTTATCCACATCTCTACTGACGAGGTATACGGAGGAAACATGCCAGG
CCAGGACTATGCCTTTACCGAGGAAGATCAGCTGAACCCCACCAATCCGT
ATTCTGCTAGCAAAGCCGCTGCTGAGATGATCGCCAATTCCTACCGTTAT
TCCTTTCACATGCCCATCATAATAACCCGCTGCAATAATGTTTTCGGTCC
CTGTCAGTACCCTGAAAGTGAGAGCTCCCTGATGCTGATTTAACGGGCTG
CTGTTCCCTGACATACCTTGTGCTAGAACTCATTCCAAAGTTCGCGATGC
AAATGCTACGTTCCCAACGAATGACTTTACATGGTCAGGGAGAGGCAGTT
CGTGGTTTTGTCTACGTCAGTGATGCCATGAGCGCTTTCGATATCATTCT
TCATCGAGGCCTTGTGTCTGAGACATACAATATATCCTCGAAAGAGCAGA
TAAAGGTCGTAGACGTTGCGAAACGAATTATTCAGTGGTTTCATGCAGTC
CAGAGCGATACCTGCGAACAATATCTGGAGACAGTCGCAGATAGACCCTT
CAACGACCGGATGTACTGGACCAATGATTCCAAGCTTCGACAATTAGGAT
GGACGGAGAAAGTGTCCTTCGATGAGGGACTTATAATGACACTAGAATGG
TATCGTGACCATGGCGAAACATTCTGGTCTGGACCAGGGCCAGCGTGTAA
ATTGAACGGGAGGCAGGGTTGA
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Coding sequence (CDS) from alignment at ch5:3237033..3238254+

>KYF_007287-T1 ID=KYF_007287-T1|Name=KYF_007287-T1|organism=Aspergillus niger KYF3|type=CDS|length=3267bp|location=Sequence derived from alignment at ch5:3237033..3238254+ (Aspergillus niger KYF3)
ATGACTGTCCAACAACCACGACTTGAAATCAATGGCTCAGACGAGGAGAA
TACCATGAAAAACGTGAAGACCATATTGGTTACTGGAGGCGCCGGTTTTA
TTGGAGGCTGGTTCGTTCGACACCTCCTTCAGGTATACGGAACGAAATAT
ACGGTACTCTGTTTTGATATCCTCGATTACTGCGCATCTAAGCGCAACTT
TCAACCCGTTGAACATTTGCCTAACTTCCACTTCTTTCCGGGGGATCTGT
GCGACCGCGACAGAGTGACTGCTCTCTTCCAGCAGTTCAAAGTGGATGCA
GTTGTCCACTTCGCGGCCAATTCTCATGTGGATCAATCTCTAGTTAACCC
GCTCTCTTTCACTCGGAGCAACGTCACAGGGACCCATGTCCTTCTGGAAG
CAGCACGCCAAGCTGGGACAGTAATAAGGTTTATCCACATCTCTACTGAC
GAGGTATACGGAGGAAACATGCCAGGCCAGGACTATGCCTTTACCGAGGA
AGATCAGCTGAACCCCACCAATCCGTATTCTGCTAGCAAAGCCGCTGCTG
AGATGATCGCCAATTCCTACCGTTATTCCTTTCACATGCCCATCATAATA
ACCCGCTGCAATAATGTTTTCGGTCCCTGTCAGTACCCTGAAAAACTCAT
TCCAAAGTTCGCGATGCAAATGCTACGTTCCCAACGAATGACTTTACATG
GTCAGGGAGAGGCAGTTCGTGGTTTTGTCTACGTCAGTGATGCCATGAGC
GCTTTCGATATCATTCTTCATCGAGGCCTTGTGTCTGAGACATACAATAT
ATCCTCGAAAGAGCAGATAAAGGTCGTAGACGTTGCGAAACGAATTATTC
AGTGGTTTCATGCAGTCCAGAGCGATACCTGCGAACAATATCTGGAGACA
GTCGCAGATAGACCCTTCAACGACCGGATGTACTGGACCAATGATTCCAA
GCTTCGACAATTAGGATGGACGGAGAAAGTGTCCTTCGATGAGGGACTTA
TAATGACACTAGAATGGTATCGTGACCATGGCGAAACATTCTGGTCTGGA
CCAGGGCCAGCGTGTAAATTGAACGGGAGGCAGGGTTGAATGACTGTCCA
ACAACCACGACTTGAAATCAATGGCTCAGACGAGGAGAATACCATGAAAA
ACGTGAAGACCATATTGGTTACTGGAGGCGCCGGTTTTATTGGAGGCTGG
TTCGTTCGACACCTCCTTCAGGTATACGGAACGAAATATACGGTACTCTG
TTTTGATATCCTCGATTACTGCGCATCTAAGCGCAACTTTCAACCCGTTG
AACATTTGCCTAACTTCCACTTCTTTCCGGGGGATCTGTGCGACCGCGAC
AGAGTGACTGCTCTCTTCCAGCAGTTCAAAGTGGATGCAGTTGTCCACTT
CGCGGCCAATTCTCATGTGGATCAATCTCTAGTTAACCCGCTCTCTTTCA
CTCGGAGCAACGTCACAGGGACCCATGTCCTTCTGGAAGCAGCACGCCAA
GCTGGGACAGTAATAAGGTTTATCCACATCTCTACTGACGAGGTATACGG
AGGAAACATGCCAGGCCAGGACTATGCCTTTACCGAGGAAGATCAGCTGA
ACCCCACCAATCCGTATTCTGCTAGCAAAGCCGCTGCTGAGATGATCGCC
AATTCCTACCGTTATTCCTTTCACATGCCCATCATAATAACCCGCTGCAA
TAATGTTTTCGGTCCCTGTCAGTACCCTGAAAAACTCATTCCAAAGTTCG
CGATGCAAATGCTACGTTCCCAACGAATGACTTTACATGGTCAGGGAGAG
GCAGTTCGTGGTTTTGTCTACGTCAGTGATGCCATGAGCGCTTTCGATAT
CATTCTTCATCGAGGCCTTGTGTCTGAGACATACAATATATCCTCGAAAG
AGCAGATAAAGGTCGTAGACGTTGCGAAACGAATTATTCAGTGGTTTCAT
GCAGTCCAGAGCGATACCTGCGAACAATATCTGGAGACAGTCGCAGATAG
ACCCTTCAACGACCGGATGTACTGGACCAATGATTCCAAGCTTCGACAAT
TAGGATGGACGGAGAAAGTGTCCTTCGATGAGGGACTTATAATGACACTA
GAATGGTATCGTGACCATGGCGAAACATTCTGGTCTGGACCAGGGCCAGC
GTGTAAATTGAACGGGAGGCAGGGTTGAATGACTGTCCAACAACCACGAC
TTGAAATCAATGGCTCAGACGAGGAGAATACCATGAAAAACGTGAAGACC
ATATTGGTTACTGGAGGCGCCGGTTTTATTGGAGGCTGGTTCGTTCGACA
CCTCCTTCAGGTATACGGAACGAAATATACGGTACTCTGTTTTGATATCC
TCGATTACTGCGCATCTAAGCGCAACTTTCAACCCGTTGAACATTTGCCT
AACTTCCACTTCTTTCCGGGGGATCTGTGCGACCGCGACAGAGTGACTGC
TCTCTTCCAGCAGTTCAAAGTGGATGCAGTTGTCCACTTCGCGGCCAATT
CTCATGTGGATCAATCTCTAGTTAACCCGCTCTCTTTCACTCGGAGCAAC
GTCACAGGGACCCATGTCCTTCTGGAAGCAGCACGCCAAGCTGGGACAGT
AATAAGGTTTATCCACATCTCTACTGACGAGGTATACGGAGGAAACATGC
CAGGCCAGGACTATGCCTTTACCGAGGAAGATCAGCTGAACCCCACCAAT
CCGTATTCTGCTAGCAAAGCCGCTGCTGAGATGATCGCCAATTCCTACCG
TTATTCCTTTCACATGCCCATCATAATAACCCGCTGCAATAATGTTTTCG
GTCCCTGTCAGTACCCTGAAAAACTCATTCCAAAGTTCGCGATGCAAATG
CTACGTTCCCAACGAATGACTTTACATGGTCAGGGAGAGGCAGTTCGTGG
TTTTGTCTACGTCAGTGATGCCATGAGCGCTTTCGATATCATTCTTCATC
GAGGCCTTGTGTCTGAGACATACAATATATCCTCGAAAGAGCAGATAAAG
GTCGTAGACGTTGCGAAACGAATTATTCAGTGGTTTCATGCAGTCCAGAG
CGATACCTGCGAACAATATCTGGAGACAGTCGCAGATAGACCCTTCAACG
ACCGGATGTACTGGACCAATGATTCCAAGCTTCGACAATTAGGATGGACG
GAGAAAGTGTCCTTCGATGAGGGACTTATAATGACACTAGAATGGTATCG
TGACCATGGCGAAACATTCTGGTCTGGACCAGGGCCAGCGTGTAAATTGA
ACGGGAGGCAGGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009225nucleotide-sugar metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008460dTDP-glucose 4,6-dehydratase activity
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_007287KYF_007287Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_007287-T1.exon1KYF_007287-T1.exon1Aspergillus niger KYF3exon
KYF_007287-T1.exon2KYF_007287-T1.exon2Aspergillus niger KYF3exon
KYF_007287-T1.exon3KYF_007287-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_007287-T1.cdsKYF_007287-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_007287-T1KYF_007287-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR005888
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR016040
DBxrefPFAM:PF04321
DBxrefPFAM:PF02719
DBxrefPFAM:PF07993
DBxrefPFAM:PF16363
DBxrefPFAM:PF01370
DBxrefPFAM:PF01073
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:3237033..3238254 +
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