|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:64799..68191+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_007324-T1 ID=KYF_007324-T1|Name=KYF_007324-T1|organism=Aspergillus niger KYF3|type=mRNA|length=3393bp|location=Sequence derived from alignment at ch6:64799..68191+ (Aspergillus niger KYF3) ATGGGTGTCCAGGGGCTCTGGACGGTCGTACATCCTTGTGCACGGCCCAT
CAAATTAGAAACTCTCAACAAAAAGCGCCTGGCTGTTGACGCATCGATAT
GGATATATCAATTTTTGAAGGCGGTACGCGACAAAGAAGGCAATGCCCTC
CGGAACTCTCATATCGTGGGCTTCTTTCGGCGCATATGCAAGCTCCTCTA
CTTTGGTATTCAGCCGGTCTTCGTGTTTGACGGTGGCGCTCCAGTACTCA
AGCGCCAAACTATAGCAAACCGGAAGAAACGGCGCGAGGGTCGGCGAGAA
GATGCCGTGCGGACCGCTGGAAAGCTGCTGGCTGTGCAGCTGCAAAGGTC
TGCTGAGGAAGAGGCGGCTACCCGCCGGAGGGGGAGAACGGAAAATGAAG
AGGAGGTGCCAGACAACCCAGTTTATGTTGGTGATGCTTTCATAACCGAA
CAGGAAAAGCAGCAGACGCGCTCGTTCAAGAAGAAGGACGCCTACCATCT
GCCGGAGTTACAAACCAGTCTTGAAGAGATGGGGGCCCCCAATGACCCTC
GTATCATGTCCCAGGACGAATTGGAGGAATATGCAAAGCAATTTCATCAA
GGAGAAGATATCAATCTGTATGATTTCTCGAAAATTGACTTTGATAGCCC
ATTCTTCGTCAGTCTCCCGGCGACGGACCGGTACAACATTCTCAATGCGG
CCAGGCTCCGAAGCCGTCTCCGGATGGGGTACTCAAAGGAGCAACTAGAC
AGCATGTTTCCTGATAGAATGGCATTCTCGAAGTTTCAAATCGAGCGTGT
AAAGGAGCGCAATGACTTAACGCAGCGCCTGATGAATATTAACGGCATGA
ACGGTGAAGATGCTCTGTACAAATCAGGACAACGTATTGCCGGAGAACGC
GGGAAGGAGTATGTCTTAGTGAAGGACGATACCATCGAAGGTGGCTGGGT
TTTGGGTGTTGTGGGAAATAAGGAAGGTCAAGAAGATAAACCTATCGATG
TTGACCAATATGGTCAGCAGCTGATATTCCCAGATAAAGAGGATGATTCG
AATGACGATGACGGAGGATTTGAAGATGTACCTATTGAAGGATTCAACCG
ACTCCCTAAGCTGCCTTTTCTCCAGAAAGGGGGTTTCGATGAGCCAAACA
GGAATCAGATGCGTGATAGCTTGAATACGAGAGGCCCCGAGCTGCAGGCA
GCCAACGAAGACTCCCTTTTCGTGGAAGGTGGTCAGGATGAATTCCTATC
GAAGCATAACCGCCATACTGCAGATACTTTGTTCGATATTAGTGGAGATG
ATGATGACGAAACGCTTCAACGAGCGATCGCGATGTCACTCGAACCTGGA
GGGGATATCAATAATGATGATCTACCTGAAATTCAGCTTAACCAGAACCA
TATGTCTCTTCCAACTATCGATGAGGCCCCGGCAAACGTTACGGATCATA
GTGATGACGAAGGAATGGACTTTGTCGCCGCCTTAGCACAGTCTAAGAGA
ATAAAGAAAGCACCGTCCAAAGTGGCAGATAATCCCTTCGATGGTCCGCT
ACCCTTTGAGTCACTTAAACCGCTCAAAACTGGAAAGTCACTCAATCGTG
CTCAAATACCCGAACAAGACGCTGGCGCCAAAACATCCGACAAAGAACCA
AGTAAGACGAAGGATAACCAGCCACTGCCGCCGTGGTTCTCAGGGCCATC
GCAAACTGTCAAAAATGTTGAATTTGTTAGTGATGAGGTTGATCTTCGTC
CAGTGGCGAAGCCGCCTACTGAGCAGAACATACCAGATCATGTGTTCATC
GTTGGCGATGAAGACGCGACGGAGGATCATAATTTAGAGTCTTCAAAAGG
CTCAAAGCCATTCATTGACTTGGAGGACCCAACTCCTCAACTGAACGTTG
TTAGTCAAGAGGTTCAAATCAAGCGCGAGAATAGACCAGAAATAACTCCT
GTCGAAGCACAAGCTACTGAGACAAAGGACGCCGAAGCTTTGGAGGCACA
CATGGGAGATAGTGTCCCAGTGGATGCGTCTAATCATTCTATGACGAAAC
ACACCTCCTTTGATGATAAACCAGATTTGAGGCATATCGAAAAGTCGCCT
TCGCCTGAGTTCGAGGATGTTGTCTTGCAGCCCGACAATGTACCCGCGGA
ACCCATTGCACTAGATCAATCAGATCAAGTGGAGGAATATTATGATGAGG
AAATTTTCTCAGATCCTGAAGACGAGCAATTACTCGAACAGCTTGCGGCT
GAAGGGGAAGAGCATGTACGCTTTGCAGCGACACTAAACTCTACTTCTCA
CACAGAACTTCCATTTGACTACGAGCAAGAACTGAGACAATTGCGATCTC
AGCAAAAGAAGGACCGCAGAGATGCAGACGAAGTGTCACAAGTCATGATT
ACTGAATGCCAGCAGTTGCTGAGGCTATTCGGTCTTCCATACATCACGGC
CCCTATGGAAGCTGAAGCCCAGTGTGCAGAACTGGTGTCACTCGGCCTTG
TTGATGGTATCATCACCGATGATAGTGATGTGTTTTTATTCGGAGGAACA
CGCGTTTACAAAAACATGTTCAACCAAAGCAAGTTTGTCGAATGCTACCT
CACAACCGACCTGGAGAAAGAGTACTCTTTGTTTCGTACCAAACTCATCA
GGCTTGCCCATCTATTAGGAAGCGACTACACAGAGGGCATCCCCGGCATC
GGGCCTGTAACTGCTCTAGAGATCCTCACTGAATTCGGGACCCTGGAAGA
CTTCCGTGATTGGTGGACTCAGGTGCAAACAGGACTCAACATGGGCAACG
ATAGCCATGCAACATTCTACAAGAAGTTCAAAAAGCATGCGACTAAAATC
TTCCTACCACCATCTTTCCCCGATCCCCGAGTCGATGCCGCGTACCTGGA
ACCAGAGGTGGACTCGGACCCGTCTCCCTTCCAGTGGGGAGTACCCGACT
TACATGGCCTGCGGGACTTCCTTATGTCAACAATCGGCTGGAGTCAAGAA
CGCACTGATGAGGTCCTGGTGCCCGTAATTCGCGACATGAACCGCAGAGA
TCAGGAGGGCACACAATCGAATATTACTAGTTTCTTCAGCGGTCCACAAG
GAGCGGGTGCCTTTGCACCACGTGTTCGCAGTGGTGGCCAGACAAGAATG
GAGAAAGCATTTAGTCGACTCCGGCACCAAGCTGCATCTGTGGAACAGCC
GGATTCAACTGGCGTAGATGGTTACTTGGTTGATCCAGCCGCAGATAATT
CCTTGGAGAGTCCAGTAACGTCAACAAGGAAGGAGGCGCGCACCAAACGA
GGGCGTCATGGAGGACGAACTACAAAGGATGGGCATGAAGACATCACGGA
CAGGACCGCTACCAACAAAAAACGTCGGACCCGCGCCAAGTAG back to topCoding sequence (CDS) from alignment at ch6:64799..68191+ >KYF_007324-T1 ID=KYF_007324-T1|Name=KYF_007324-T1|organism=Aspergillus niger KYF3|type=CDS|length=3393bp|location=Sequence derived from alignment at ch6:64799..68191+ (Aspergillus niger KYF3) ATGGGTGTCCAGGGGCTCTGGACGGTCGTACATCCTTGTGCACGGCCCAT CAAATTAGAAACTCTCAACAAAAAGCGCCTGGCTGTTGACGCATCGATAT GGATATATCAATTTTTGAAGGCGGTACGCGACAAAGAAGGCAATGCCCTC CGGAACTCTCATATCGTGGGCTTCTTTCGGCGCATATGCAAGCTCCTCTA CTTTGGTATTCAGCCGGTCTTCGTGTTTGACGGTGGCGCTCCAGTACTCA AGCGCCAAACTATAGCAAACCGGAAGAAACGGCGCGAGGGTCGGCGAGAA GATGCCGTGCGGACCGCTGGAAAGCTGCTGGCTGTGCAGCTGCAAAGGTC TGCTGAGGAAGAGGCGGCTACCCGCCGGAGGGGGAGAACGGAAAATGAAG AGGAGGTGCCAGACAACCCAGTTTATGTTGGTGATGCTTTCATAACCGAA CAGGAAAAGCAGCAGACGCGCTCGTTCAAGAAGAAGGACGCCTACCATCT GCCGGAGTTACAAACCAGTCTTGAAGAGATGGGGGCCCCCAATGACCCTC GTATCATGTCCCAGGACGAATTGGAGGAATATGCAAAGCAATTTCATCAA GGAGAAGATATCAATCTGTATGATTTCTCGAAAATTGACTTTGATAGCCC ATTCTTCGTCAGTCTCCCGGCGACGGACCGGTACAACATTCTCAATGCGG CCAGGCTCCGAAGCCGTCTCCGGATGGGGTACTCAAAGGAGCAACTAGAC AGCATGTTTCCTGATAGAATGGCATTCTCGAAGTTTCAAATCGAGCGTGT AAAGGAGCGCAATGACTTAACGCAGCGCCTGATGAATATTAACGGCATGA ACGGTGAAGATGCTCTGTACAAATCAGGACAACGTATTGCCGGAGAACGC GGGAAGGAGTATGTCTTAGTGAAGGACGATACCATCGAAGGTGGCTGGGT TTTGGGTGTTGTGGGAAATAAGGAAGGTCAAGAAGATAAACCTATCGATG TTGACCAATATGGTCAGCAGCTGATATTCCCAGATAAAGAGGATGATTCG AATGACGATGACGGAGGATTTGAAGATGTACCTATTGAAGGATTCAACCG ACTCCCTAAGCTGCCTTTTCTCCAGAAAGGGGGTTTCGATGAGCCAAACA GGAATCAGATGCGTGATAGCTTGAATACGAGAGGCCCCGAGCTGCAGGCA GCCAACGAAGACTCCCTTTTCGTGGAAGGTGGTCAGGATGAATTCCTATC GAAGCATAACCGCCATACTGCAGATACTTTGTTCGATATTAGTGGAGATG ATGATGACGAAACGCTTCAACGAGCGATCGCGATGTCACTCGAACCTGGA GGGGATATCAATAATGATGATCTACCTGAAATTCAGCTTAACCAGAACCA TATGTCTCTTCCAACTATCGATGAGGCCCCGGCAAACGTTACGGATCATA GTGATGACGAAGGAATGGACTTTGTCGCCGCCTTAGCACAGTCTAAGAGA ATAAAGAAAGCACCGTCCAAAGTGGCAGATAATCCCTTCGATGGTCCGCT ACCCTTTGAGTCACTTAAACCGCTCAAAACTGGAAAGTCACTCAATCGTG CTCAAATACCCGAACAAGACGCTGGCGCCAAAACATCCGACAAAGAACCA AGTAAGACGAAGGATAACCAGCCACTGCCGCCGTGGTTCTCAGGGCCATC GCAAACTGTCAAAAATGTTGAATTTGTTAGTGATGAGGTTGATCTTCGTC CAGTGGCGAAGCCGCCTACTGAGCAGAACATACCAGATCATGTGTTCATC GTTGGCGATGAAGACGCGACGGAGGATCATAATTTAGAGTCTTCAAAAGG CTCAAAGCCATTCATTGACTTGGAGGACCCAACTCCTCAACTGAACGTTG TTAGTCAAGAGGTTCAAATCAAGCGCGAGAATAGACCAGAAATAACTCCT GTCGAAGCACAAGCTACTGAGACAAAGGACGCCGAAGCTTTGGAGGCACA CATGGGAGATAGTGTCCCAGTGGATGCGTCTAATCATTCTATGACGAAAC ACACCTCCTTTGATGATAAACCAGATTTGAGGCATATCGAAAAGTCGCCT TCGCCTGAGTTCGAGGATGTTGTCTTGCAGCCCGACAATGTACCCGCGGA ACCCATTGCACTAGATCAATCAGATCAAGTGGAGGAATATTATGATGAGG AAATTTTCTCAGATCCTGAAGACGAGCAATTACTCGAACAGCTTGCGGCT GAAGGGGAAGAGCATGTACGCTTTGCAGCGACACTAAACTCTACTTCTCA CACAGAACTTCCATTTGACTACGAGCAAGAACTGAGACAATTGCGATCTC AGCAAAAGAAGGACCGCAGAGATGCAGACGAAGTGTCACAAGTCATGATT ACTGAATGCCAGCAGTTGCTGAGGCTATTCGGTCTTCCATACATCACGGC CCCTATGGAAGCTGAAGCCCAGTGTGCAGAACTGGTGTCACTCGGCCTTG TTGATGGTATCATCACCGATGATAGTGATGTGTTTTTATTCGGAGGAACA CGCGTTTACAAAAACATGTTCAACCAAAGCAAGTTTGTCGAATGCTACCT CACAACCGACCTGGAGAAAGAGTACTCTTTGTTTCGTACCAAACTCATCA GGCTTGCCCATCTATTAGGAAGCGACTACACAGAGGGCATCCCCGGCATC GGGCCTGTAACTGCTCTAGAGATCCTCACTGAATTCGGGACCCTGGAAGA CTTCCGTGATTGGTGGACTCAGGTGCAAACAGGACTCAACATGGGCAACG ATAGCCATGCAACATTCTACAAGAAGTTCAAAAAGCATGCGACTAAAATC TTCCTACCACCATCTTTCCCCGATCCCCGAGTCGATGCCGCGTACCTGGA ACCAGAGGTGGACTCGGACCCGTCTCCCTTCCAGTGGGGAGTACCCGACT TACATGGCCTGCGGGACTTCCTTATGTCAACAATCGGCTGGAGTCAAGAA CGCACTGATGAGGTCCTGGTGCCCGTAATTCGCGACATGAACCGCAGAGA TCAGGAGGGCACACAATCGAATATTACTAGTTTCTTCAGCGGTCCACAAG GAGCGGGTGCCTTTGCACCACGTGTTCGCAGTGGTGGCCAGACAAGAATG GAGAAAGCATTTAGTCGACTCCGGCACCAAGCTGCATCTGTGGAACAGCC GGATTCAACTGGCGTAGATGGTTACTTGGTTGATCCAGCCGCAGATAATT CCTTGGAGAGTCCAGTAACGTCAACAAGGAAGGAGGCGCGCACCAAACGA GGGCGTCATGGAGGACGAACTACAAAGGATGGGCATGAAGACATCACGGA CAGGACCGCTACCAACAAAAAACGTCGGACCCGCGCCAAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006281 | DNA repair |
GO:0006289 | nucleotide-excision repair |
Vocabulary: Molecular Function
Term | Definition |
GO:0016788 | hydrolase activity, acting on ester bonds |
GO:0003677 | DNA binding |
GO:0003824 | catalytic activity |
GO:0004518 | nuclease activity |
GO:0004519 | endonuclease activity |
GO:0003697 | single-stranded DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | BUSCO:EOG09260B3H |
DBxref | InterPro:IPR036279 |
DBxref | InterPro:IPR029060 |
DBxref | InterPro:IPR019974 |
DBxref | InterPro:IPR008918 |
DBxref | InterPro:IPR006085 |
DBxref | InterPro:IPR006086 |
DBxref | InterPro:IPR006084 |
DBxref | InterPro:IPR001044 |
DBxref | PFAM:PF00752 |
DBxref | PFAM:PF00867 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:64799..68191 + |
|