You are here

Home

KYF_007480-T1, KYF_007480-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_007480-T1
Unique NameKYF_007480-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:463539..464053+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_007480-T1 ID=KYF_007480-T1|Name=KYF_007480-T1|organism=Aspergillus niger KYF3|type=mRNA|length=515bp|location=Sequence derived from alignment at ch6:463539..464053+ (Aspergillus niger KYF3)
ATGCCTTCATTTCCTGCTCCTGCGGAGAGGGCCCAGACCCTGCAAAGCCT
TATCGGGTACATCTTCAATGACCCGAATCGTGCGATGGAAGCACTAGTCG
CTGCTGGGGTTCACATGCCCGGATTGATCAATCGCACGGATGGTCACAAG
CAACTTGCTCTCGTTGGGGATGCCGTTCTCAGAATGATTCTGGCGTTGGA
CGGATACGAAGCCCGAAAGGGCAGAGGTAGATATTATTCCATTTAACCAG
AATCACATTCTCATCCCTTATGGCAGAATTCACGAACAGTATCCTCTCAA
CGAAGGCCGGCAACACATACATCGCCCAGGCTGGACGTAACCTGGGCCTG
GACAAACTTGTCATTGTCAATCCAGCCCAGGCCGGAATGGTCGCGGACAA
AGTCATGGCTAGCGCCGTTGAAGCTATTATCGGAGCTGTCTTCATGGACA
GCGATGGCTCTGTTGAGTCCGTGCGACCTGTCCTGGCTACCTTGGGCCTT
GACTGGCCTGCTTGA
back to top

Coding sequence (CDS) from alignment at ch6:463539..464053+

>KYF_007480-T1 ID=KYF_007480-T1|Name=KYF_007480-T1|organism=Aspergillus niger KYF3|type=CDS|length=930bp|location=Sequence derived from alignment at ch6:463539..464053+ (Aspergillus niger KYF3)
ATGCCTTCATTTCCTGCTCCTGCGGAGAGGGCCCAGACCCTGCAAAGCCT
TATCGGGTACATCTTCAATGACCCGAATCGTGCGATGGAAGCACTAGTCG
CTGCTGGGGTTCACATGCCCGGATTGATCAATCGCACGGATGGTCACAAG
CAACTTGCTCTCGTTGGGGATGCCGTTCTCAGAATGATTCTGGCGTTGGA
CGGATACGAAGCCCGAAAGGGCAGAGAATTCACGAACAGTATCCTCTCAA
CGAAGGCCGGCAACACATACATCGCCCAGGCTGGACGTAACCTGGGCCTG
GACAAACTTGTCATTGTCAATCCAGCCCAGGCCGGAATGGTCGCGGACAA
AGTCATGGCTAGCGCCGTTGAAGCTATTATCGGAGCTGTCTTCATGGACA
GCGATGGCTCTGTTGAGTCCGTGCGACCTGTCCTGGCTACCTTGGGCCTT
GACTGGCCTGCTTGAATGCCTTCATTTCCTGCTCCTGCGGAGAGGGCCCA
GACCCTGCAAAGCCTTATCGGGTACATCTTCAATGACCCGAATCGTGCGA
TGGAAGCACTAGTCGCTGCTGGGGTTCACATGCCCGGATTGATCAATCGC
ACGGATGGTCACAAGCAACTTGCTCTCGTTGGGGATGCCGTTCTCAGAAT
GATTCTGGCGTTGGACGGATACGAAGCCCGAAAGGGCAGAGAATTCACGA
ACAGTATCCTCTCAACGAAGGCCGGCAACACATACATCGCCCAGGCTGGA
CGTAACCTGGGCCTGGACAAACTTGTCATTGTCAATCCAGCCCAGGCCGG
AATGGTCGCGGACAAAGTCATGGCTAGCGCCGTTGAAGCTATTATCGGAG
CTGTCTTCATGGACAGCGATGGCTCTGTTGAGTCCGTGCGACCTGTCCTG
GCTACCTTGGGCCTTGACTGGCCTGCTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0004525ribonuclease III activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_007480KYF_007480Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_007480-T1.exon1KYF_007480-T1.exon1Aspergillus niger KYF3exon
KYF_007480-T1.exon2KYF_007480-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_007480-T1.cdsKYF_007480-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_007480-T1KYF_007480-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_6.2
DBxrefInterPro:IPR036389
DBxrefInterPro:IPR000999
DBxrefPFAM:PF00636
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:463539..464053 +
Powered by Drupal