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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:519558..521086+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_007502-T1 ID=KYF_007502-T1|Name=KYF_007502-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1529bp|location=Sequence derived from alignment at ch6:519558..521086+ (Aspergillus niger KYF3)
ATGAGTTGGATGTTGTGGTATACTATAGCTGGCCTAGCATCTCTAGGCCA
TGCTTCTCTTGAGAAACGCGCCACCGATGCATCTGCGTACTGCTCCGATT
CATCGGGTACCTACAAGCTCTCGTCGATCACGGCCCCAGTTCAGGGAAGT
GGCAGCCCGGGCTCAGCATCCACCTGGAAGCTAAGTATTGACGATACATC
ATCCGGTCACAAGCAGGCAATCACTGGCTTCGGGGCTGCTGTGACCGATG
CGACCGTCACGTCTTTTAACACCTTGTCGAGCTCTACCCTCCAACAGCTC
CTCAATGAGTTGATGACTTCCGATGGAGCTAATTTCTCTCTCATGCGCCA
TACCATCGGCGCGTCTGATCTGTCCGGTGATCCGGTCTACACCTATGATG
ACAACGGAAACGAAGCAGACCCCTCACTTTCCGGCTTCGGTCTCGGCGAC
CGTGGCACTGCTATGGCGGAAATGTTGGCCACGATGAAATCGTTGCAGTC
AGACCTGAAGGTGCTTGGGTCCCCGTGGAGTGCGCCCGGATGGATGAAAT
TGAATGGCGTGATTGATGGCAACGCGACTGATAACAACCTTAACGATGGC
TACCTTACCAGTGGTGGCACGGGAAGCACCGGCTACTCCAGTGCTTTCGC
GCAGTACTTCGTGAAATACATCCAAGCGTACGAAGCATTAGGAGCTACGG
TCGATGCCATTACGATTCAGAATGAGCCGTTAAATAGTCAATCTGGATAT
CCCACCATGTATGTTTACGACTATGAGTCTGCGCAGCTGATCCAAAAATA
CATTGGACCGGCTCTTGCCGACGCTGGACTGAGCACGGAAATCTGGGCCT
TCGATCACAATACTGGCAAGTACCCCATTCTCGACAATCATTGACAACTG
CTAATAATCGACATCCAGATCACGCATCGTACCCTCAGACTGTGCTTGAT
GAAGCAAGTCAATACGTCGACACGGTAGCCTGGCACTGTTATGCAAAGGA
TGTTGACTGGACTGTTCTCAGCCAGTTCTACAGCGCCAACCCTGGGGTCA
AGCAATATATGACCGAATGCTGGACACCAGCTTCCGGATCATGGCACCAG
GCTGCTGATTTTACCATGGGCCCTCTGCAGAACTATGCGTCGGGGGTCAT
GGCGTGGACTCTGGGCACGAACACTGACGACGGTCCGCATTTGACCAGTG
GTGGATGCGACGCCTGTCAGGGCTTGGTCACCATCAACGATGATGACAGC
TATACTCTTAATACTGCCTACTACATGATGGCACAGTTTAGCAAGTTCAT
GCCTCCTGGCGCGACCGTGTTGAACGGAACGGGGAGCTATACCTACTCGG
GTGGCGATGGCGTACAGTCGGTGGCGTCCCTGAACCCTGATGGAACGCGC
ACAGTCATTATTGAGAATATATTCAGTAACGATATTTACTTGACTCTGTC
GACGGAGAGCGGAGAGGAGTGGAGTGGAAATATCCCCAGTGAATCGGTGA
CTACTTGGGTCCTTCCGGCCTTGTCTTGA back to topCoding sequence (CDS) from alignment at ch6:519558..521086+ >KYF_007502-T1 ID=KYF_007502-T1|Name=KYF_007502-T1|organism=Aspergillus niger KYF3|type=CDS|length=2880bp|location=Sequence derived from alignment at ch6:519558..521086+ (Aspergillus niger KYF3)
ATGAGTTGGATGTTGTGGTATACTATAGCTGGCCTAGCATCTCTAGGCCA
TGCTTCTCTTGAGAAACGCGCCACCGATGCATCTGCGTACTGCTCCGATT
CATCGGGTACCTACAAGCTCTCGTCGATCACGGCCCCAGTTCAGGGAAGT
GGCAGCCCGGGCTCAGCATCCACCTGGAAGCTAAGTATTGACGATACATC
ATCCGGTCACAAGCAGGCAATCACTGGCTTCGGGGCTGCTGTGACCGATG
CGACCGTCACGTCTTTTAACACCTTGTCGAGCTCTACCCTCCAACAGCTC
CTCAATGAGTTGATGACTTCCGATGGAGCTAATTTCTCTCTCATGCGCCA
TACCATCGGCGCGTCTGATCTGTCCGGTGATCCGGTCTACACCTATGATG
ACAACGGAAACGAAGCAGACCCCTCACTTTCCGGCTTCGGTCTCGGCGAC
CGTGGCACTGCTATGGCGGAAATGTTGGCCACGATGAAATCGTTGCAGTC
AGACCTGAAGGTGCTTGGGTCCCCGTGGAGTGCGCCCGGATGGATGAAAT
TGAATGGCGTGATTGATGGCAACGCGACTGATAACAACCTTAACGATGGC
TACCTTACCAGTGGTGGCACGGGAAGCACCGGCTACTCCAGTGCTTTCGC
GCAGTACTTCGTGAAATACATCCAAGCGTACGAAGCATTAGGAGCTACGG
TCGATGCCATTACGATTCAGAATGAGCCGTTAAATAGTCAATCTGGATAT
CCCACCATGTATGTTTACGACTATGAGTCTGCGCAGCTGATCCAAAAATA
CATTGGACCGGCTCTTGCCGACGCTGGACTGAGCACGGAAATCTGGGCCT
TCGATCACAATACTGGCAATCAATACGTCGACACGGTAGCCTGGCACTGT
TATGCAAAGGATGTTGACTGGACTGTTCTCAGCCAGTTCTACAGCGCCAA
CCCTGGGGTCAAGCAATATATGACCGAATGCTGGACACCAGCTTCCGGAT
CATGGCACCAGGCTGCTGATTTTACCATGGGCCCTCTGCAGAACTATGCG
TCGGGGGTCATGGCGTGGACTCTGGGCACGAACACTGACGACGGTCCGCA
TTTGACCAGTGGTGGATGCGACGCCTGTCAGGGCTTGGTCACCATCAACG
ATGATGACAGCTATACTCTTAATACTGCCTACTACATGATGGCACAGTTT
AGCAAGTTCATGCCTCCTGGCGCGACCGTGTTGAACGGAACGGGGAGCTA
TACCTACTCGGGTGGCGATGGCGTACAGTCGGTGGCGTCCCTGAACCCTG
ATGGAACGCGCACAGTCATTATTGAGAATATATTCAGTAACGATATTTAC
TTGACTCTGTCGACGGAGAGCGGAGAGGAGTGGAGTGGAAATATCCCCAG
TGAATCGGTGACTACTTGGGTCCTTCCGGCCTTGTCTTGAATGAGTTGGA
TGTTGTGGTATACTATAGCTGGCCTAGCATCTCTAGGCCATGCTTCTCTT
GAGAAACGCGCCACCGATGCATCTGCGTACTGCTCCGATTCATCGGGTAC
CTACAAGCTCTCGTCGATCACGGCCCCAGTTCAGGGAAGTGGCAGCCCGG
GCTCAGCATCCACCTGGAAGCTAAGTATTGACGATACATCATCCGGTCAC
AAGCAGGCAATCACTGGCTTCGGGGCTGCTGTGACCGATGCGACCGTCAC
GTCTTTTAACACCTTGTCGAGCTCTACCCTCCAACAGCTCCTCAATGAGT
TGATGACTTCCGATGGAGCTAATTTCTCTCTCATGCGCCATACCATCGGC
GCGTCTGATCTGTCCGGTGATCCGGTCTACACCTATGATGACAACGGAAA
CGAAGCAGACCCCTCACTTTCCGGCTTCGGTCTCGGCGACCGTGGCACTG
CTATGGCGGAAATGTTGGCCACGATGAAATCGTTGCAGTCAGACCTGAAG
GTGCTTGGGTCCCCGTGGAGTGCGCCCGGATGGATGAAATTGAATGGCGT
GATTGATGGCAACGCGACTGATAACAACCTTAACGATGGCTACCTTACCA
GTGGTGGCACGGGAAGCACCGGCTACTCCAGTGCTTTCGCGCAGTACTTC
GTGAAATACATCCAAGCGTACGAAGCATTAGGAGCTACGGTCGATGCCAT
TACGATTCAGAATGAGCCGTTAAATAGTCAATCTGGATATCCCACCATGT
ATGTTTACGACTATGAGTCTGCGCAGCTGATCCAAAAATACATTGGACCG
GCTCTTGCCGACGCTGGACTGAGCACGGAAATCTGGGCCTTCGATCACAA
TACTGGCAATCAATACGTCGACACGGTAGCCTGGCACTGTTATGCAAAGG
ATGTTGACTGGACTGTTCTCAGCCAGTTCTACAGCGCCAACCCTGGGGTC
AAGCAATATATGACCGAATGCTGGACACCAGCTTCCGGATCATGGCACCA
GGCTGCTGATTTTACCATGGGCCCTCTGCAGAACTATGCGTCGGGGGTCA
TGGCGTGGACTCTGGGCACGAACACTGACGACGGTCCGCATTTGACCAGT
GGTGGATGCGACGCCTGTCAGGGCTTGGTCACCATCAACGATGATGACAG
CTATACTCTTAATACTGCCTACTACATGATGGCACAGTTTAGCAAGTTCA
TGCCTCCTGGCGCGACCGTGTTGAACGGAACGGGGAGCTATACCTACTCG
GGTGGCGATGGCGTACAGTCGGTGGCGTCCCTGAACCCTGATGGAACGCG
CACAGTCATTATTGAGAATATATTCAGTAACGATATTTACTTGACTCTGT
CGACGGAGAGCGGAGAGGAGTGGAGTGGAAATATCCCCAGTGAATCGGTG
ACTACTTGGGTCCTTCCGGCCTTGTCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | CAZy:GH30_7 |
| Note | CAZy:GH30_2 |
| Note | CAZy:GH30_1 |
| Note | CAZy:GH30 |
| Note | CAZy:GH30_3 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR033453 |
| DBxref | InterPro:IPR033452 |
| DBxref | PFAM:PF17189 |
| DBxref | PFAM:PF02055 |
| Product | 6-beta-D-glucanase neg1 |
| Product | Endo-1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:519558..521086 + |
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