You are here

Home

KYF_007539-T1, KYF_007539-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_007539-T1
Unique NameKYF_007539-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:608367..609983-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_007539-T1 ID=KYF_007539-T1|Name=KYF_007539-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1617bp|location=Sequence derived from alignment at ch6:608367..609983- (Aspergillus niger KYF3)
ATGACTACCCAACCCAACGAGAAAGACGTTTTCAAAGTTCCACCCAACCA
TGATATGGAGCAAGCGGATACTGAAGTCCAGCGTGGCGAGATCAAGCATG
GAGAGACGCGAGAATTTGATCCAGCCCTGCAGTTTATGGCTGATGGCGAG
ATCGAATATACTCCTGAAGAGTCCCGCAAAGTGTTGTTCAAGATCGACCG
AGTCCTGATGCCTTTGCTGTGTTGGGTTTATTTGATCCAATTTGCCGACA
AAACGTCTTTGAATTATGCCTCCCTAATGGGAATCCGCGAGGACACACAC
TTGGACCCTAAGTCACAGCAATACAGCTGGGTCTCGAGCATTTTCTACGC
TGGATATATATTCTGGGAGTACGTACCATTACAATCTCTCTACCTCCCTT
CTCTAGGTCCGTGCTAATTTCGGTATAGATTTCCCACCACCTATCTGCTA
CGTCGACTTCCACTAGGGGAATATACTTCAGCCAATATTCTGATTTGGGG
CGTCGTGCTCCTCTGCCATGTCGCAACTGATAGTTACGCTGGACTGCTCT
GTGTCCGCTTTTTCCTCGGCGCGTTCGAAGCGACAATAACTCCGGCCTTC
GTCCTGTTTACCTCCTGTTGGTATAAACAAGAGGAGCAGGCCAAGCGTAT
GGGCTTCTGGCTTGCTTGCAACGGCGTCGCTCAGATACTGATTGCGGCAA
TCGCGTATGGACTGTCAGGTGTGCAAGAGGCATCTATTCCTGTGTGGAAG
ATACTCTTCCTGGTGCTTGGCTTGCCTACCGTTCTCACCGGTTTTCTTTA
TTTTTGGTTCATGCCTGACAATCAGATCCAGGCCAAATTCCTGAGCCATC
GCGAGAAGCATATTGCTGTTGATCGCATCAGAGGCAACTTTCAGGGCATT
GGGAACCGTACTTGGAAATGGGCACATTTCTTCGAAGCATTCCGGGATCC
GCGCACATACCTCTACGTTCTATTCTCATTCTTGATGAATATTCCAAATG
GAGGAATCACTACCTTCGGTTCTCTCATTATCAGCTCTTTCGGCTTCTCT
AGCCGGATGTCCCTCATGCTGAACATGCCAATGGGTCTTGTTGATATCTC
CTGCAAGCTGGGATTGACGTACTTGTCGGACAGATTACTTGACCGAACCC
TCTTTGCCATCATCGCTATCCTTATACCTATGGTTGGTGGCATCTTGATG
ATTGTCCTTCCCCTTCACGCAAAAGCCGGCTTGTTGGTGGGTTACTATTG
TATCGGTGCTGCCGGGACCTCGTGGTGTTTGGTCATGGTGATGATATCTA
ACAATACGTTGGGTTACACCAAGAAGGCAACTGTGAATGGTCTTCAGATA
TTGGCCTATGCTGCTGGAAACTGGATCGGACCGCAGACGTTCCGCTCGAA
TCAAGCGCCGGAGTACTTCGACGGCAAATTGCTCGTTGCCATCATGTACG
CTCTGGCAGCGGCTACCTTATTGGTAATTCGTCTGGTGAACATTATGGAA
AATAAGAAACGCGACCGACAGGCAATTTCTGATCCCGACCTCGAGAACGT
TGCTGTTGGGACCGAGTTCCTCGATTTGACGGATTTCGAGCAGCCAGCCT
TCCGCTATGTGCTCTGA
back to top

Coding sequence (CDS) from alignment at ch6:608367..609983-

>KYF_007539-T1 ID=KYF_007539-T1|Name=KYF_007539-T1|organism=Aspergillus niger KYF3|type=CDS|length=3114bp|location=Sequence derived from alignment at ch6:608367..609983- (Aspergillus niger KYF3)
ATTTCCCACCACCTATCTGCTACGTCGACTTCCACTAGGGGAATATACTT
CAGCCAATATTCTGATTTGGGGCGTCGTGCTCCTCTGCCATGTCGCAACT
GATAGTTACGCTGGACTGCTCTGTGTCCGCTTTTTCCTCGGCGCGTTCGA
AGCGACAATAACTCCGGCCTTCGTCCTGTTTACCTCCTGTTGGTATAAAC
AAGAGGAGCAGGCCAAGCGTATGGGCTTCTGGCTTGCTTGCAACGGCGTC
GCTCAGATACTGATTGCGGCAATCGCGTATGGACTGTCAGGTGTGCAAGA
GGCATCTATTCCTGTGTGGAAGATACTCTTCCTGGTGCTTGGCTTGCCTA
CCGTTCTCACCGGTTTTCTTTATTTTTGGTTCATGCCTGACAATCAGATC
CAGGCCAAATTCCTGAGCCATCGCGAGAAGCATATTGCTGTTGATCGCAT
CAGAGGCAACTTTCAGGGCATTGGGAACCGTACTTGGAAATGGGCACATT
TCTTCGAAGCATTCCGGGATCCGCGCACATACCTCTACGTTCTATTCTCA
TTCTTGATGAATATTCCAAATGGAGGAATCACTACCTTCGGTTCTCTCAT
TATCAGCTCTTTCGGCTTCTCTAGCCGGATGTCCCTCATGCTGAACATGC
CAATGGGTCTTGTTGATATCTCCTGCAAGCTGGGATTGACGTACTTGTCG
GACAGATTACTTGACCGAACCCTCTTTGCCATCATCGCTATCCTTATACC
TATGGTTGGTGGCATCTTGATGATTGTCCTTCCCCTTCACGCAAAAGCCG
GCTTGTTGGTGGGTTACTATTGTATCGGTGCTGCCGGGACCTCGTGGTGT
TTGGTCATGGTGATGATATCTAACAATACGTTGGGTTACACCAAGAAGGC
AACTGTGAATGGTCTTCAGATATTGGCCTATGCTGCTGGAAACTGGATCG
GACCGCAGACGTTCCGCTCGAATCAAGCGCCGGAGTACTTCGACGGCAAA
TTGCTCGTTGCCATCATGTACGCTCTGGCAGCGGCTACCTTATTGGTAAT
TCGTCTGGTGAACATTATGGAAAATAAGAAACGCGACCGACAGGCAATTT
CTGATCCCGACCTCGAGAACGTTGCTGTTGGGACCGAGTTCCTCGATTTG
ACGGATTTCGAGCAGCCAGCCTTCCGCTATGTGCTCTGAATGACTACCCA
ACCCAACGAGAAAGACGTTTTCAAAGTTCCACCCAACCATGATATGGAGC
AAGCGGATACTGAAGTCCAGCGTGGCGAGATCAAGCATGGAGAGACGCGA
GAATTTGATCCAGCCCTGCAGTTTATGGCTGATGGCGAGATCGAATATAC
TCCTGAAGAGTCCCGCAAAGTGTTGTTCAAGATCGACCGAGTCCTGATGC
CTTTGCTGTGTTGGGTTTATTTGATCCAATTTGCCGACAAAACGTCTTTG
AATTATGCCTCCCTAATGGGAATCCGCGAGGACACACACTTGGACCCTAA
GTCACAGCAATACAGCTGGGTCTCGAGCATTTTCTACGCTGGATATATAT
TCTGGGAATTTCCCACCACCTATCTGCTACGTCGACTTCCACTAGGGGAA
TATACTTCAGCCAATATTCTGATTTGGGGCGTCGTGCTCCTCTGCCATGT
CGCAACTGATAGTTACGCTGGACTGCTCTGTGTCCGCTTTTTCCTCGGCG
CGTTCGAAGCGACAATAACTCCGGCCTTCGTCCTGTTTACCTCCTGTTGG
TATAAACAAGAGGAGCAGGCCAAGCGTATGGGCTTCTGGCTTGCTTGCAA
CGGCGTCGCTCAGATACTGATTGCGGCAATCGCGTATGGACTGTCAGGTG
TGCAAGAGGCATCTATTCCTGTGTGGAAGATACTCTTCCTGGTGCTTGGC
TTGCCTACCGTTCTCACCGGTTTTCTTTATTTTTGGTTCATGCCTGACAA
TCAGATCCAGGCCAAATTCCTGAGCCATCGCGAGAAGCATATTGCTGTTG
ATCGCATCAGAGGCAACTTTCAGGGCATTGGGAACCGTACTTGGAAATGG
GCACATTTCTTCGAAGCATTCCGGGATCCGCGCACATACCTCTACGTTCT
ATTCTCATTCTTGATGAATATTCCAAATGGAGGAATCACTACCTTCGGTT
CTCTCATTATCAGCTCTTTCGGCTTCTCTAGCCGGATGTCCCTCATGCTG
AACATGCCAATGGGTCTTGTTGATATCTCCTGCAAGCTGGGATTGACGTA
CTTGTCGGACAGATTACTTGACCGAACCCTCTTTGCCATCATCGCTATCC
TTATACCTATGGTTGGTGGCATCTTGATGATTGTCCTTCCCCTTCACGCA
AAAGCCGGCTTGTTGGTGGGTTACTATTGTATCGGTGCTGCCGGGACCTC
GTGGTGTTTGGTCATGGTGATGATATCTAACAATACGTTGGGTTACACCA
AGAAGGCAACTGTGAATGGTCTTCAGATATTGGCCTATGCTGCTGGAAAC
TGGATCGGACCGCAGACGTTCCGCTCGAATCAAGCGCCGGAGTACTTCGA
CGGCAAATTGCTCGTTGCCATCATGTACGCTCTGGCAGCGGCTACCTTAT
TGGTAATTCGTCTGGTGAACATTATGGAAAATAAGAAACGCGACCGACAG
GCAATTTCTGATCCCGACCTCGAGAACGTTGCTGTTGGGACCGAGTTCCT
CGATTTGACGGATTTCGAGCAGCCAGCCTTCCGCTATGTGCTCTGAATGA
CTACCCAACCCAACGAGAAAGACGTTTTCAAAGTTCCACCCAACCATGAT
ATGGAGCAAGCGGATACTGAAGTCCAGCGTGGCGAGATCAAGCATGGAGA
GACGCGAGAATTTGATCCAGCCCTGCAGTTTATGGCTGATGGCGAGATCG
AATATACTCCTGAAGAGTCCCGCAAAGTGTTGTTCAAGATCGACCGAGTC
CTGATGCCTTTGCTGTGTTGGGTTTATTTGATCCAATTTGCCGACAAAAC
GTCTTTGAATTATGCCTCCCTAATGGGAATCCGCGAGGACACACACTTGG
ACCCTAAGTCACAGCAATACAGCTGGGTCTCGAGCATTTTCTACGCTGGA
TATATATTCTGGGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_007539KYF_007539Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_007539-T1KYF_007539-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_007539-T1.cdsKYF_007539-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_007539-T1.exon2KYF_007539-T1.exon2Aspergillus niger KYF3exon
KYF_007539-T1.exon1KYF_007539-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:608367..609983 -
Powered by Drupal