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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:793053..794705+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_007562-T1 ID=KYF_007562-T1|Name=KYF_007562-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1653bp|location=Sequence derived from alignment at ch6:793053..794705+ (Aspergillus niger KYF3) ATGGCTCACCAACCCCGGACAAGTCCTCCTGAAGGACTACAGCATCTTGT
CCGATCAGAGACCAGGGAATCTCTGAATGATGTCGGTGTGACAGATAGAA
CACCCCGGCTTGACTACAACTACCCGGATATTGGACGGCCAGCGAGTCCC
ATCTTCCCTGAGGAATACGTTCTTGAAACTAGGACTGGGCTTGTTCCCGA
GAGAACATTGGAACAAATCCGCACCCGACCCTCAACAGTAAGTCCAGAGG
GTCTAGAAGAAGCTATTTTGAAGGGAGCCGAGTTTGTGACATTCACCGTC
GGAGATCCCGAGCATCCCTACAATTGGTCGCGTTGGTACCGTTGGTACAT
CACATTGATCGCGTCAACGCTTGTGGTGTGTGTTGCGTTCGGGTCGTCTA
TTGTCACTGGGGGACTTGGTTTGATCGAAGAGAAGTACCAAGTCTCGCTA
GAAGTCGCGATCCTCACTTGCTCTATCATGGTCTGTGGGTTTGCTGTTGG
CCCGCTGTTGTGGTCTCCCCTTTCCGAAATCATCGGCCGACGCCCTGTGT
ACATAATGTCGCTCGGTCTGTACGTCATCTTCAACATTCCGTGTGCGCTC
TCGCCAAATATAGGCGGGCTACTCGTCTGCCGATTCTTATGCGGCGTATT
CTCCAGCTCAGGGCTTTCCCTGGCCGGTGGGACCATTGCTGATATCTGGA
GCATTGAGGAGCGAGGAATGGCCATTGCGTATTTTGCGGCGGCACCTTAC
TGTGGCCCCGTTGTTGGCCCGATTGTCTGTGGCTGGATCACTGTTGGGTC
GGGTCGCTTGGACCTTTTCTTCTGGGTAAACCTGGCTTTCGCAGGTTCTA
TATTGGTTCTCATAGGTTTGATACCGGAGACGTACGCCCCAGTAATCCTT
AAACGACGAGCAGCAAAGCTCAGGAAGGAGACGGGGAATACGGCTATCGT
TACTGAGCAGGAGAAGCACAAATTTACCTTGATGGAAATTGCGCGTACAA
GCCTGATTCGACCTATCACGATGATCATGACAGAGCCCGTGCTCGATCTG
ATGTGTATGTACATCGTCCTCATTTACGCCATGCTCTATGCCTTCTTTTT
CGCCTATCCCGTCATATTCGGTAGACTCTACGGCTACAACGATGGCCAGA
TCGGTCTTATGTTTATTCCCATCCTCATTGGTTCATTCTTCGCTTTGGTC
ACTACGCCACTCATTGAGAAGCAGTTCAAAAGGGTATGCGAGGTTCGGGA
ACCTACTGCAGAGGATCGGCTTATTGGCGCCCTTATTGGCGCCCCTTTTA
TTCCAATATCGCTCTTCATTCTCGGCGCTACGTCTTTCAAGCACATCATC
TGGGTTGGGCCTGCATCGTCGGGAATCGCGTTCGGATATGGGATGGTGTT
GTGCTACTACGCTGTGAACAACTATATCATCGATTCGTACCAGGATTACG
CTGCCTCGGCTCTAGCAGCTAAGGTCTTCCTGCGATCCGGTGGTGGAGCT
GCCTTCCCTCTCTTCACCACGCAAATGTACAACCGGCTGGGGTTGCAGTG
GGCTTCCTGGCTTCTTGCATTTCTTGGTGTGGGAATGGTTTTCATCCCAT
ATGGATTCTACGTCTTTGGCGTGAAGCTTCGTGCTAAGCTGAACCGACAC
TAA back to topCoding sequence (CDS) from alignment at ch6:793053..794705+ >KYF_007562-T1 ID=KYF_007562-T1|Name=KYF_007562-T1|organism=Aspergillus niger KYF3|type=CDS|length=1653bp|location=Sequence derived from alignment at ch6:793053..794705+ (Aspergillus niger KYF3) ATGGCTCACCAACCCCGGACAAGTCCTCCTGAAGGACTACAGCATCTTGT CCGATCAGAGACCAGGGAATCTCTGAATGATGTCGGTGTGACAGATAGAA CACCCCGGCTTGACTACAACTACCCGGATATTGGACGGCCAGCGAGTCCC ATCTTCCCTGAGGAATACGTTCTTGAAACTAGGACTGGGCTTGTTCCCGA GAGAACATTGGAACAAATCCGCACCCGACCCTCAACAGTAAGTCCAGAGG GTCTAGAAGAAGCTATTTTGAAGGGAGCCGAGTTTGTGACATTCACCGTC GGAGATCCCGAGCATCCCTACAATTGGTCGCGTTGGTACCGTTGGTACAT CACATTGATCGCGTCAACGCTTGTGGTGTGTGTTGCGTTCGGGTCGTCTA TTGTCACTGGGGGACTTGGTTTGATCGAAGAGAAGTACCAAGTCTCGCTA GAAGTCGCGATCCTCACTTGCTCTATCATGGTCTGTGGGTTTGCTGTTGG CCCGCTGTTGTGGTCTCCCCTTTCCGAAATCATCGGCCGACGCCCTGTGT ACATAATGTCGCTCGGTCTGTACGTCATCTTCAACATTCCGTGTGCGCTC TCGCCAAATATAGGCGGGCTACTCGTCTGCCGATTCTTATGCGGCGTATT CTCCAGCTCAGGGCTTTCCCTGGCCGGTGGGACCATTGCTGATATCTGGA GCATTGAGGAGCGAGGAATGGCCATTGCGTATTTTGCGGCGGCACCTTAC TGTGGCCCCGTTGTTGGCCCGATTGTCTGTGGCTGGATCACTGTTGGGTC GGGTCGCTTGGACCTTTTCTTCTGGGTAAACCTGGCTTTCGCAGGTTCTA TATTGGTTCTCATAGGTTTGATACCGGAGACGTACGCCCCAGTAATCCTT AAACGACGAGCAGCAAAGCTCAGGAAGGAGACGGGGAATACGGCTATCGT TACTGAGCAGGAGAAGCACAAATTTACCTTGATGGAAATTGCGCGTACAA GCCTGATTCGACCTATCACGATGATCATGACAGAGCCCGTGCTCGATCTG ATGTGTATGTACATCGTCCTCATTTACGCCATGCTCTATGCCTTCTTTTT CGCCTATCCCGTCATATTCGGTAGACTCTACGGCTACAACGATGGCCAGA TCGGTCTTATGTTTATTCCCATCCTCATTGGTTCATTCTTCGCTTTGGTC ACTACGCCACTCATTGAGAAGCAGTTCAAAAGGGTATGCGAGGTTCGGGA ACCTACTGCAGAGGATCGGCTTATTGGCGCCCTTATTGGCGCCCCTTTTA TTCCAATATCGCTCTTCATTCTCGGCGCTACGTCTTTCAAGCACATCATC TGGGTTGGGCCTGCATCGTCGGGAATCGCGTTCGGATATGGGATGGTGTT GTGCTACTACGCTGTGAACAACTATATCATCGATTCGTACCAGGATTACG CTGCCTCGGCTCTAGCAGCTAAGGTCTTCCTGCGATCCGGTGGTGGAGCT GCCTTCCCTCTCTTCACCACGCAAATGTACAACCGGCTGGGGTTGCAGTG GGCTTCCTGGCTTCTTGCATTTCTTGGTGTGGGAATGGTTTTCATCCCAT ATGGATTCTACGTCTTTGGCGTGAAGCTTCGTGCTAAGCTGAACCGACAC TAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | EggNog:ENOG41 |
DBxref | InterPro:IPR036259 |
DBxref | InterPro:IPR020846 |
DBxref | InterPro:IPR011701 |
DBxref | PFAM:PF00083 |
DBxref | PFAM:PF07690 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:793053..794705 + |
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