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KYF_007687-T1, KYF_007687-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_007687-T1
Unique NameKYF_007687-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1336623..1337748-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_007687-T1 ID=KYF_007687-T1|Name=KYF_007687-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1126bp|location=Sequence derived from alignment at ch6:1336623..1337748- (Aspergillus niger KYF3)
ATGGTGGCTTACTCTTCGCGTTCCCCCTCCTTCCAGAAGCCATATACCTA
CCCTGAGCCTCCACGAAAAATGGCGCGCTTCAGAGCCAGCAATATTCTGG
GCGACCCCTTTGCGCTCGCAAGCACGTCCATCTCCATTGTATGTCTTCAA
TTCGTCCTCGTGCGGTGGTTAGGATCCGCTGCTAATCACCTTTTCTTCGT
TTAGTTGGCTTGGTTGATCGCATTTATCTCCTCCATTGTCACTGGCGTAC
ATGGCGGATATCCCACCTATTCATGGTGGGCTGTTGCTTACTCATTTTGC
TGCATTGTCGGCATGGCGCTTGTCTTCGGCACCGATACTGGTGCCGTCTA
TAACATAGCGGTATGTTACCATCCCTCCTGAATCAATCTTTTGACAACCC
TTCGTACTGATTTATGGCAGATCGTGGGGTATCTTTCCGCTGGTCTTGTT
ATCACAACAATCTCCATCAACACGTTAGTCTATGCAAACAGCGCCGCATC
GCAGGCTGCCGGTGCTGGGTTCATTCTTTTGGCTATGGTTATTGTAAGTG
ATAACCAGCTCCGACACACATACCCACTAGGCAGTACGTGACTTACCATT
AATGCAGATCATTTGGATTTTCTACTTCGGATCTAGCCCTCAGGCTTCGC
ATCGCGGCTTCATCGATTCATTTGCCCTCCAGAAGGAAGGTGCTGGCTCG
TACGGAAATGGCAGACCTATGTCAACTGCATTCGGCAATCGACCCGAGAC
GACATCCAGCCAGCCCCCGCAGATGTACACGTCCGCTCAACTCAACGGCT
TCGAGACCTCTTCGCCCGTGTCGGGTTATCCCGGAGGAGCCCCCGGCTCC
GAACACCGCAGCTCCTCGCAGCCCCGCTTCGGCAACCCGTCCGCTACGAA
TCTGCCCAACAATGGCGCACCAGATGAAGTCCCCCAGCCCACGGAATATC
CGTACCGTGCGAAGGCGATCTATTCGTATGAGGCCAACCCTGAAGATGCC
AATGAGATCAGTTTCACCAAGCATGAGATCTTGGAGGTGTCCGATGTGAG
CGGTAGATGGTGGCAGGCCAGGAAGGCCACCGGAGAGACCGGTATTGCTC
CATCCAACTACCTGATCTTGCTGTGA
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Coding sequence (CDS) from alignment at ch6:1336623..1337748-

>KYF_007687-T1 ID=KYF_007687-T1|Name=KYF_007687-T1|organism=Aspergillus niger KYF3|type=CDS|length=3744bp|location=Sequence derived from alignment at ch6:1336623..1337748- (Aspergillus niger KYF3)
ATCATTTGGATTTTCTACTTCGGATCTAGCCCTCAGGCTTCGCATCGCGG
CTTCATCGATTCATTTGCCCTCCAGAAGGAAGGTGCTGGCTCGTACGGAA
ATGGCAGACCTATGTCAACTGCATTCGGCAATCGACCCGAGACGACATCC
AGCCAGCCCCCGCAGATGTACACGTCCGCTCAACTCAACGGCTTCGAGAC
CTCTTCGCCCGTGTCGGGTTATCCCGGAGGAGCCCCCGGCTCCGAACACC
GCAGCTCCTCGCAGCCCCGCTTCGGCAACCCGTCCGCTACGAATCTGCCC
AACAATGGCGCACCAGATGAAGTCCCCCAGCCCACGGAATATCCGTACCG
TGCGAAGGCGATCTATTCGTATGAGGCCAACCCTGAAGATGCCAATGAGA
TCAGTTTCACCAAGCATGAGATCTTGGAGGTGTCCGATGTGAGCGGTAGA
TGGTGGCAGGCCAGGAAGGCCACCGGAGAGACCGGTATTGCTCCATCCAA
CTACCTGATCTTGCTGTGAATCGTGGGGTATCTTTCCGCTGGTCTTGTTA
TCACAACAATCTCCATCAACACGTTAGTCTATGCAAACAGCGCCGCATCG
CAGGCTGCCGGTGCTGGGTTCATTCTTTTGGCTATGGTTATTTTGGCTTG
GTTGATCGCATTTATCTCCTCCATTGTCACTGGCGTACATGGCGGATATC
CCACCTATTCATGGTGGGCTGTTGCTTACTCATTTTGCTGCATTGTCGGC
ATGGCGCTTGTCTTCGGCACCGATACTGGTGCCGTCTATAACATAGCGAT
GGTGGCTTACTCTTCGCGTTCCCCCTCCTTCCAGAAGCCATATACCTACC
CTGAGCCTCCACGAAAAATGGCGCGCTTCAGAGCCAGCAATATTCTGGGC
GACCCCTTTGCGCTCGCAAGCACGTCCATCTCCATTATCATTTGGATTTT
CTACTTCGGATCTAGCCCTCAGGCTTCGCATCGCGGCTTCATCGATTCAT
TTGCCCTCCAGAAGGAAGGTGCTGGCTCGTACGGAAATGGCAGACCTATG
TCAACTGCATTCGGCAATCGACCCGAGACGACATCCAGCCAGCCCCCGCA
GATGTACACGTCCGCTCAACTCAACGGCTTCGAGACCTCTTCGCCCGTGT
CGGGTTATCCCGGAGGAGCCCCCGGCTCCGAACACCGCAGCTCCTCGCAG
CCCCGCTTCGGCAACCCGTCCGCTACGAATCTGCCCAACAATGGCGCACC
AGATGAAGTCCCCCAGCCCACGGAATATCCGTACCGTGCGAAGGCGATCT
ATTCGTATGAGGCCAACCCTGAAGATGCCAATGAGATCAGTTTCACCAAG
CATGAGATCTTGGAGGTGTCCGATGTGAGCGGTAGATGGTGGCAGGCCAG
GAAGGCCACCGGAGAGACCGGTATTGCTCCATCCAACTACCTGATCTTGC
TGTGAATCGTGGGGTATCTTTCCGCTGGTCTTGTTATCACAACAATCTCC
ATCAACACGTTAGTCTATGCAAACAGCGCCGCATCGCAGGCTGCCGGTGC
TGGGTTCATTCTTTTGGCTATGGTTATTTTGGCTTGGTTGATCGCATTTA
TCTCCTCCATTGTCACTGGCGTACATGGCGGATATCCCACCTATTCATGG
TGGGCTGTTGCTTACTCATTTTGCTGCATTGTCGGCATGGCGCTTGTCTT
CGGCACCGATACTGGTGCCGTCTATAACATAGCGATGGTGGCTTACTCTT
CGCGTTCCCCCTCCTTCCAGAAGCCATATACCTACCCTGAGCCTCCACGA
AAAATGGCGCGCTTCAGAGCCAGCAATATTCTGGGCGACCCCTTTGCGCT
CGCAAGCACGTCCATCTCCATTATCATTTGGATTTTCTACTTCGGATCTA
GCCCTCAGGCTTCGCATCGCGGCTTCATCGATTCATTTGCCCTCCAGAAG
GAAGGTGCTGGCTCGTACGGAAATGGCAGACCTATGTCAACTGCATTCGG
CAATCGACCCGAGACGACATCCAGCCAGCCCCCGCAGATGTACACGTCCG
CTCAACTCAACGGCTTCGAGACCTCTTCGCCCGTGTCGGGTTATCCCGGA
GGAGCCCCCGGCTCCGAACACCGCAGCTCCTCGCAGCCCCGCTTCGGCAA
CCCGTCCGCTACGAATCTGCCCAACAATGGCGCACCAGATGAAGTCCCCC
AGCCCACGGAATATCCGTACCGTGCGAAGGCGATCTATTCGTATGAGGCC
AACCCTGAAGATGCCAATGAGATCAGTTTCACCAAGCATGAGATCTTGGA
GGTGTCCGATGTGAGCGGTAGATGGTGGCAGGCCAGGAAGGCCACCGGAG
AGACCGGTATTGCTCCATCCAACTACCTGATCTTGCTGTGAATCGTGGGG
TATCTTTCCGCTGGTCTTGTTATCACAACAATCTCCATCAACACGTTAGT
CTATGCAAACAGCGCCGCATCGCAGGCTGCCGGTGCTGGGTTCATTCTTT
TGGCTATGGTTATTTTGGCTTGGTTGATCGCATTTATCTCCTCCATTGTC
ACTGGCGTACATGGCGGATATCCCACCTATTCATGGTGGGCTGTTGCTTA
CTCATTTTGCTGCATTGTCGGCATGGCGCTTGTCTTCGGCACCGATACTG
GTGCCGTCTATAACATAGCGATGGTGGCTTACTCTTCGCGTTCCCCCTCC
TTCCAGAAGCCATATACCTACCCTGAGCCTCCACGAAAAATGGCGCGCTT
CAGAGCCAGCAATATTCTGGGCGACCCCTTTGCGCTCGCAAGCACGTCCA
TCTCCATTATCATTTGGATTTTCTACTTCGGATCTAGCCCTCAGGCTTCG
CATCGCGGCTTCATCGATTCATTTGCCCTCCAGAAGGAAGGTGCTGGCTC
GTACGGAAATGGCAGACCTATGTCAACTGCATTCGGCAATCGACCCGAGA
CGACATCCAGCCAGCCCCCGCAGATGTACACGTCCGCTCAACTCAACGGC
TTCGAGACCTCTTCGCCCGTGTCGGGTTATCCCGGAGGAGCCCCCGGCTC
CGAACACCGCAGCTCCTCGCAGCCCCGCTTCGGCAACCCGTCCGCTACGA
ATCTGCCCAACAATGGCGCACCAGATGAAGTCCCCCAGCCCACGGAATAT
CCGTACCGTGCGAAGGCGATCTATTCGTATGAGGCCAACCCTGAAGATGC
CAATGAGATCAGTTTCACCAAGCATGAGATCTTGGAGGTGTCCGATGTGA
GCGGTAGATGGTGGCAGGCCAGGAAGGCCACCGGAGAGACCGGTATTGCT
CCATCCAACTACCTGATCTTGCTGTGAATCGTGGGGTATCTTTCCGCTGG
TCTTGTTATCACAACAATCTCCATCAACACGTTAGTCTATGCAAACAGCG
CCGCATCGCAGGCTGCCGGTGCTGGGTTCATTCTTTTGGCTATGGTTATT
TTGGCTTGGTTGATCGCATTTATCTCCTCCATTGTCACTGGCGTACATGG
CGGATATCCCACCTATTCATGGTGGGCTGTTGCTTACTCATTTTGCTGCA
TTGTCGGCATGGCGCTTGTCTTCGGCACCGATACTGGTGCCGTCTATAAC
ATAGCGATGGTGGCTTACTCTTCGCGTTCCCCCTCCTTCCAGAAGCCATA
TACCTACCCTGAGCCTCCACGAAAAATGGCGCGCTTCAGAGCCAGCAATA
TTCTGGGCGACCCCTTTGCGCTCGCAAGCACGTCCATCTCCATT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SHO1KYF_007687Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_007687-T1KYF_007687-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_007687-T1.cdsKYF_007687-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_007687-T1.exon4KYF_007687-T1.exon4Aspergillus niger KYF3exon
KYF_007687-T1.exon3KYF_007687-T1.exon3Aspergillus niger KYF3exon
KYF_007687-T1.exon2KYF_007687-T1.exon2Aspergillus niger KYF3exon
KYF_007687-T1.exon1KYF_007687-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR036028
DBxrefInterPro:IPR035522
DBxrefInterPro:IPR001452
DBxrefPFAM:PF07653
DBxrefPFAM:PF00018
ProductTransmembrane osmosensor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1336623..1337748 -
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