You are here

KYF_007923-T1, KYF_007923-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_007923-T1
Unique NameKYF_007923-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2128063..2128890+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_007923-T1 ID=KYF_007923-T1|Name=KYF_007923-T1|organism=Aspergillus niger KYF3|type=mRNA|length=828bp|location=Sequence derived from alignment at ch6:2128063..2128890+ (Aspergillus niger KYF3)
ATGCATCGGTCTTCCAATTACTCATACCAACAAACCTCGAGCTCGAGGAG CTCCAATCATGGAACCAGCAGCGCGTTCAGCCCCAATGCCAACCCCAACG AGGACTGGACCAAGATCTCAGACCTTGCAGAGCGTCGCCGGATACAGAAT CGCATTGCTCAGAGAAACTACCGTAAGTTATCTTCTCTGCAGGGTGTTTA GCTATGCTGCGACTCGAAGCTCACTGAATGCGACAATCCAGGCAAGAAGC TAAAGCGTCGCCTCGAAGACTTGGAGAAGAGAGCCGCAACTGCTTCGACA TCTCCAGAACGGTCACACGAGGGCTCGGAGTCGCCGAAGGCCGTGGTGCA CACTGTCAAGTCCCGCACCAAACAGGCTCGCACAACCAAGTCTAGCTCAG ATGCAAACCGTCACACCTCCGCGCAACGAGGCTCTTCCTATGACAGCCAC TCCACCCAGGAAGATCGCTTGTTTTCCCAGCAATGCACCCGACAGCTCTC AGCCTCGCCGCCTCCCGTGTTCTCTTATCCCTCATACTCCCACTTGGAAT CCTATGGTCACCACTCCTACGGACAGGCACCTTCCTATCACTCTCTCAAC AACCACTACAATGACCTCCCATATGGAGAGTACGGAACAACGCTGCCTTC GATCCTGCCTGGTCCGATACTCGGATCGGGCGCAAAGAAGCACCACTCGT ACGCCGATGACGAGATTGTCAGCCCCTTCAGTATGAGCTATGCATCCATG GCTGGCATTGATCTGGGCCCGACGCCGCAACACCTTCCAGAGCACAACAT TCCTGTACATGCCCCTCTCTCTACGTGA
back to top

Coding sequence (CDS) from alignment at ch6:2128063..2128890+

>KYF_007923-T1 ID=KYF_007923-T1|Name=KYF_007923-T1|organism=Aspergillus niger KYF3|type=CDS|length=1518bp|location=Sequence derived from alignment at ch6:2128063..2128890+ (Aspergillus niger KYF3)
ATGCATCGGTCTTCCAATTACTCATACCAACAAACCTCGAGCTCGAGGAG
CTCCAATCATGGAACCAGCAGCGCGTTCAGCCCCAATGCCAACCCCAACG
AGGACTGGACCAAGATCTCAGACCTTGCAGAGCGTCGCCGGATACAGAAT
CGCATTGCTCAGAGAAACTACCGCAAGAAGCTAAAGCGTCGCCTCGAAGA
CTTGGAGAAGAGAGCCGCAACTGCTTCGACATCTCCAGAACGGTCACACG
AGGGCTCGGAGTCGCCGAAGGCCGTGGTGCACACTGTCAAGTCCCGCACC
AAACAGGCTCGCACAACCAAGTCTAGCTCAGATGCAAACCGTCACACCTC
CGCGCAACGAGGCTCTTCCTATGACAGCCACTCCACCCAGGAAGATCGCT
TGTTTTCCCAGCAATGCACCCGACAGCTCTCAGCCTCGCCGCCTCCCGTG
TTCTCTTATCCCTCATACTCCCACTTGGAATCCTATGGTCACCACTCCTA
CGGACAGGCACCTTCCTATCACTCTCTCAACAACCACTACAATGACCTCC
CATATGGAGAGTACGGAACAACGCTGCCTTCGATCCTGCCTGGTCCGATA
CTCGGATCGGGCGCAAAGAAGCACCACTCGTACGCCGATGACGAGATTGT
CAGCCCCTTCAGTATGAGCTATGCATCCATGGCTGGCATTGATCTGGGCC
CGACGCCGCAACACCTTCCAGAGCACAACATTCCTGTACATGCCCCTCTC
TCTACGTGAATGCATCGGTCTTCCAATTACTCATACCAACAAACCTCGAG
CTCGAGGAGCTCCAATCATGGAACCAGCAGCGCGTTCAGCCCCAATGCCA
ACCCCAACGAGGACTGGACCAAGATCTCAGACCTTGCAGAGCGTCGCCGG
ATACAGAATCGCATTGCTCAGAGAAACTACCGCAAGAAGCTAAAGCGTCG
CCTCGAAGACTTGGAGAAGAGAGCCGCAACTGCTTCGACATCTCCAGAAC
GGTCACACGAGGGCTCGGAGTCGCCGAAGGCCGTGGTGCACACTGTCAAG
TCCCGCACCAAACAGGCTCGCACAACCAAGTCTAGCTCAGATGCAAACCG
TCACACCTCCGCGCAACGAGGCTCTTCCTATGACAGCCACTCCACCCAGG
AAGATCGCTTGTTTTCCCAGCAATGCACCCGACAGCTCTCAGCCTCGCCG
CCTCCCGTGTTCTCTTATCCCTCATACTCCCACTTGGAATCCTATGGTCA
CCACTCCTACGGACAGGCACCTTCCTATCACTCTCTCAACAACCACTACA
ATGACCTCCCATATGGAGAGTACGGAACAACGCTGCCTTCGATCCTGCCT
GGTCCGATACTCGGATCGGGCGCAAAGAAGCACCACTCGTACGCCGATGA
CGAGATTGTCAGCCCCTTCAGTATGAGCTATGCATCCATGGCTGGCATTG
ATCTGGGCCCGACGCCGCAACACCTTCCAGAGCACAACATTCCTGTACAT
GCCCCTCTCTCTACGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_007923KYF_007923Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_007923-T1.exon1KYF_007923-T1.exon1Aspergillus niger KYF3exon
KYF_007923-T1.exon2KYF_007923-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_007923-T1.cdsKYF_007923-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_007923-T1KYF_007923-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR004827
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2128063..2128890 +