|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2633247..2635430- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_008080-T1 ID=KYF_008080-T1|Name=KYF_008080-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2184bp|location=Sequence derived from alignment at ch6:2633247..2635430- (Aspergillus niger KYF3) ATGCGTCGTGTCAAAAAGTCTCGTAATGGATGTGCTCGGTGCAAGAGCAA
ACGAGTGAGTTTAGTATCCTTTGCGCGGTGGCTACATAGTCCCGCCCCAT
GTGGCCCCAAACATTAATTTTGATGCTTCGCCTATTAATAGGTAAAATGC
GGGGAAGAACGACCTCATTGTAGTCGATGCACCCGCCTGGGTGTCAATTG
CCCTGGATATGTCCAGTCTCTGCGTTGGGTCACCAAGTATCCGCCGCAGG
CCCACGGGGAGCCGAACAAAGATCCCGCTGGGGATATTCCCAGTGATTCT
AACACTATCCCGAATCAAAGTTCCGATCCCAAAAATCTGACTACCAGCGC
TGCCGACTATGTTGACCCGCTGACTCAGTCTTTGGCCACGGATGGTGACA
GCCTCAACTTTACCACTTCCGACGGCCCGGCCAATCCTCGAGGTCTTGAA
CTAGGCGGACCAGGCGGTATATGTGACAACTTATGGGACTTACAGCAGTC
AGGCTCACTACCGGAACTGGCAGACCTCCATTCTCCAGCATCGGCATCAA
CAGCTAGCCAAAATAACCCAGCATTGAACTTCGAATCACCGGGAACTAAT
GCAGATGATCCGTTCGGGTTGTTCTCTTTGGCCGCACCGATTCTACAAGA
TGAGCCTCACATCTTTCCTGGCTTTTCACCTTCTACTATTGTACGCCACT
ACCCTCCACCTGGCTCAAGGCCAGCACAGCGGGACTTCACATCGATCCCG
CAGCCCCTCAACAATCCTTCGTGGACACTCGTGGAGTACTACTTCAAAGA
GGTAGCGGCCTTGTTTTCAAGCTATGACAGTCAGATGAACCCATTCCGGT
CGACAGTATCCCGACTATGGGGCTCGTCGTTGGCCATGTGTCGGACCATG
CAGAGCATGGCTGCTGCAACACTCGTCCACGACTTCCCTCAATTCGGCCC
GTTAGGCCGGAAAATGCGTGACGAGGCAGTCGATATCATCACAAAGGAGT
CTGCCCTGGACGACAAGTCACTCCTAGCTCTCTTGATGCTTGGTCAAACA
GCCAGCTGGCACGACCCCAAGGACCTTGGCATTTCCTTCTTCAACCTGCT
GCGAAATCATCTGGACACCAAGCACGCCGGACCACCAATTCCAGGCCGTA
GCAATAACCATCAATTTTTTGAAGAAGCTTTGGTCTACTGGGAAATGCTC
CTATCCTTTGTGGCGGATGACTCGGCGGTGTTGCCAGGCTCCGCAGCCGC
CGCAACAGGTGAATCGCTCGTCCTACAACGCGTTCCCCATCCATGGACCG
GCATAGCCCGCGACACCCAGCATACCGTCCAAGAAGTAGGAAGGCTTATA
CGTAGGGAGCGCAAACGAATTCGCTCCCGCTGCTTTACCTCACACTCAGA
CATTGCACGCGCCCAGCGCGCCATGGCAAAAGCAACAGAGCTAGAAGAGC
GACTTTTGAGTCTGGCGCACCCAGCTGAAGCTGAAATCATCAGCCCAGGC
GACGACGAAACCCCAGTCTGGCATCTTCTCACAATGGCCGAAGTATACCG
CTGTACCGGTCTAATGCAATTATACCGGGTCTTTCCCGATCTTCTTCGCC
GACGACTACCCACACAACGACCTTCCCCAAACCCGCAAGCTCCAGAACCA
ACCATGCAAGATCCGTTCCTCTCCTCTCCAGTGGGCAGTAGTACACCCTG
GTACTGCGACCCTTCATGTCCGCCCGCAAAACCCACCGACTCCGCCGATC
CAACAACAACATCAACCACCGCACATTCAGGCTCCGACTCCGACTCTTAC
TACGACGCCTGGCTGACCGAATTTACCCTCACAACTCTCTCCCGCCTAAA
GACCATCCCCCTTGAGTCCCGCACCCGATGTCTCCAGCCCTTCCTCCTCG
TAGCCTCGAGTAGCGAGCTTCGTCTGCCCCGTCTGCCCCCACTTGACGCC
ACTCTCGATAGCAGCAACGGCCCAAGTATCTCCTCCCATGCCATTGACGT
CTCGCAAAGTCGTCGGTTCATCCTTGGCCGCCTCACCTCGTATCTTCACG
TGCTCCCTCCCAAGCCCATTAGTGTCTGTCTGCAGCTGGTGCGGGAGGTT
TGGCGGCGTATGGACGCCGGGGAGCCGGGCGTCTATTGGATGGATGTGAT
GATAGAAAAGGGCTGGGAGACTACAATGGGGTAA back to topCoding sequence (CDS) from alignment at ch6:2633247..2635430- >KYF_008080-T1 ID=KYF_008080-T1|Name=KYF_008080-T1|organism=Aspergillus niger KYF3|type=CDS|length=4194bp|location=Sequence derived from alignment at ch6:2633247..2635430- (Aspergillus niger KYF3) GTAAAATGCGGGGAAGAACGACCTCATTGTAGTCGATGCACCCGCCTGGG TGTCAATTGCCCTGGATATGTCCAGTCTCTGCGTTGGGTCACCAAGTATC CGCCGCAGGCCCACGGGGAGCCGAACAAAGATCCCGCTGGGGATATTCCC AGTGATTCTAACACTATCCCGAATCAAAGTTCCGATCCCAAAAATCTGAC TACCAGCGCTGCCGACTATGTTGACCCGCTGACTCAGTCTTTGGCCACGG ATGGTGACAGCCTCAACTTTACCACTTCCGACGGCCCGGCCAATCCTCGA GGTCTTGAACTAGGCGGACCAGGCGGTATATGTGACAACTTATGGGACTT ACAGCAGTCAGGCTCACTACCGGAACTGGCAGACCTCCATTCTCCAGCAT CGGCATCAACAGCTAGCCAAAATAACCCAGCATTGAACTTCGAATCACCG GGAACTAATGCAGATGATCCGTTCGGGTTGTTCTCTTTGGCCGCACCGAT TCTACAAGATGAGCCTCACATCTTTCCTGGCTTTTCACCTTCTACTATTG TACGCCACTACCCTCCACCTGGCTCAAGGCCAGCACAGCGGGACTTCACA TCGATCCCGCAGCCCCTCAACAATCCTTCGTGGACACTCGTGGAGTACTA CTTCAAAGAGGTAGCGGCCTTGTTTTCAAGCTATGACAGTCAGATGAACC CATTCCGGTCGACAGTATCCCGACTATGGGGCTCGTCGTTGGCCATGTGT CGGACCATGCAGAGCATGGCTGCTGCAACACTCGTCCACGACTTCCCTCA ATTCGGCCCGTTAGGCCGGAAAATGCGTGACGAGGCAGTCGATATCATCA CAAAGGAGTCTGCCCTGGACGACAAGTCACTCCTAGCTCTCTTGATGCTT GGTCAAACAGCCAGCTGGCACGACCCCAAGGACCTTGGCATTTCCTTCTT CAACCTGCTGCGAAATCATCTGGACACCAAGCACGCCGGACCACCAATTC CAGGCCGTAGCAATAACCATCAATTTTTTGAAGAAGCTTTGGTCTACTGG GAAATGCTCCTATCCTTTGTGGCGGATGACTCGGCGGTGTTGCCAGGCTC CGCAGCCGCCGCAACAGGTGAATCGCTCGTCCTACAACGCGTTCCCCATC CATGGACCGGCATAGCCCGCGACACCCAGCATACCGTCCAAGAAGTAGGA AGGCTTATACGTAGGGAGCGCAAACGAATTCGCTCCCGCTGCTTTACCTC ACACTCAGACATTGCACGCGCCCAGCGCGCCATGGCAAAAGCAACAGAGC TAGAAGAGCGACTTTTGAGTCTGGCGCACCCAGCTGAAGCTGAAATCATC AGCCCAGGCGACGACGAAACCCCAGTCTGGCATCTTCTCACAATGGCCGA AGTATACCGCTGTACCGGTCTAATGCAATTATACCGGGTCTTTCCCGATC TTCTTCGCCGACGACTACCCACACAACGACCTTCCCCAAACCCGCAAGCT CCAGAACCAACCATGCAAGATCCGTTCCTCTCCTCTCCAGTGGGCAGTAG TACACCCTGGTACTGCGACCCTTCATGTCCGCCCGCAAAACCCACCGACT CCGCCGATCCAACAACAACATCAACCACCGCACATTCAGGCTCCGACTCC GACTCTTACTACGACGCCTGGCTGACCGAATTTACCCTCACAACTCTCTC CCGCCTAAAGACCATCCCCCTTGAGTCCCGCACCCGATGTCTCCAGCCCT TCCTCCTCGTAGCCTCGAGTAGCGAGCTTCGTCTGCCCCGTCTGCCCCCA CTTGACGCCACTCTCGATAGCAGCAACGGCCCAAGTATCTCCTCCCATGC CATTGACGTCTCGCAAAGTCGTCGGTTCATCCTTGGCCGCCTCACCTCGT ATCTTCACGTGCTCCCTCCCAAGCCCATTAGTGTCTGTCTGCAGCTGGTG CGGGAGGTTTGGCGGCGTATGGACGCCGGGGAGCCGGGCGTCTATTGGAT GGATGTGATGATAGAAAAGGGCTGGGAGACTACAATGGGGTAAATGCGTC GTGTCAAAAAGTCTCGTAATGGATGTGCTCGGTGCAAGAGCAAACGAGTA AAATGCGGGGAAGAACGACCTCATTGTAGTCGATGCACCCGCCTGGGTGT CAATTGCCCTGGATATGTCCAGTCTCTGCGTTGGGTCACCAAGTATCCGC CGCAGGCCCACGGGGAGCCGAACAAAGATCCCGCTGGGGATATTCCCAGT GATTCTAACACTATCCCGAATCAAAGTTCCGATCCCAAAAATCTGACTAC CAGCGCTGCCGACTATGTTGACCCGCTGACTCAGTCTTTGGCCACGGATG GTGACAGCCTCAACTTTACCACTTCCGACGGCCCGGCCAATCCTCGAGGT CTTGAACTAGGCGGACCAGGCGGTATATGTGACAACTTATGGGACTTACA GCAGTCAGGCTCACTACCGGAACTGGCAGACCTCCATTCTCCAGCATCGG CATCAACAGCTAGCCAAAATAACCCAGCATTGAACTTCGAATCACCGGGA ACTAATGCAGATGATCCGTTCGGGTTGTTCTCTTTGGCCGCACCGATTCT ACAAGATGAGCCTCACATCTTTCCTGGCTTTTCACCTTCTACTATTGTAC GCCACTACCCTCCACCTGGCTCAAGGCCAGCACAGCGGGACTTCACATCG ATCCCGCAGCCCCTCAACAATCCTTCGTGGACACTCGTGGAGTACTACTT CAAAGAGGTAGCGGCCTTGTTTTCAAGCTATGACAGTCAGATGAACCCAT TCCGGTCGACAGTATCCCGACTATGGGGCTCGTCGTTGGCCATGTGTCGG ACCATGCAGAGCATGGCTGCTGCAACACTCGTCCACGACTTCCCTCAATT CGGCCCGTTAGGCCGGAAAATGCGTGACGAGGCAGTCGATATCATCACAA AGGAGTCTGCCCTGGACGACAAGTCACTCCTAGCTCTCTTGATGCTTGGT CAAACAGCCAGCTGGCACGACCCCAAGGACCTTGGCATTTCCTTCTTCAA CCTGCTGCGAAATCATCTGGACACCAAGCACGCCGGACCACCAATTCCAG GCCGTAGCAATAACCATCAATTTTTTGAAGAAGCTTTGGTCTACTGGGAA ATGCTCCTATCCTTTGTGGCGGATGACTCGGCGGTGTTGCCAGGCTCCGC AGCCGCCGCAACAGGTGAATCGCTCGTCCTACAACGCGTTCCCCATCCAT GGACCGGCATAGCCCGCGACACCCAGCATACCGTCCAAGAAGTAGGAAGG CTTATACGTAGGGAGCGCAAACGAATTCGCTCCCGCTGCTTTACCTCACA CTCAGACATTGCACGCGCCCAGCGCGCCATGGCAAAAGCAACAGAGCTAG AAGAGCGACTTTTGAGTCTGGCGCACCCAGCTGAAGCTGAAATCATCAGC CCAGGCGACGACGAAACCCCAGTCTGGCATCTTCTCACAATGGCCGAAGT ATACCGCTGTACCGGTCTAATGCAATTATACCGGGTCTTTCCCGATCTTC TTCGCCGACGACTACCCACACAACGACCTTCCCCAAACCCGCAAGCTCCA GAACCAACCATGCAAGATCCGTTCCTCTCCTCTCCAGTGGGCAGTAGTAC ACCCTGGTACTGCGACCCTTCATGTCCGCCCGCAAAACCCACCGACTCCG CCGATCCAACAACAACATCAACCACCGCACATTCAGGCTCCGACTCCGAC TCTTACTACGACGCCTGGCTGACCGAATTTACCCTCACAACTCTCTCCCG CCTAAAGACCATCCCCCTTGAGTCCCGCACCCGATGTCTCCAGCCCTTCC TCCTCGTAGCCTCGAGTAGCGAGCTTCGTCTGCCCCGTCTGCCCCCACTT GACGCCACTCTCGATAGCAGCAACGGCCCAAGTATCTCCTCCCATGCCAT TGACGTCTCGCAAAGTCGTCGGTTCATCCTTGGCCGCCTCACCTCGTATC TTCACGTGCTCCCTCCCAAGCCCATTAGTGTCTGTCTGCAGCTGGTGCGG GAGGTTTGGCGGCGTATGGACGCCGGGGAGCCGGGCGTCTATTGGATGGA TGTGATGATAGAAAAGGGCTGGGAGACTACAATGGGGTAAATGCGTCGTG TCAAAAAGTCTCGTAATGGATGTGCTCGGTGCAAGAGCAAACGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
Term | Definition |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | EggNog:ENOG41 |
DBxref | InterPro:IPR021858 |
DBxref | InterPro:IPR036864 |
DBxref | InterPro:IPR001138 |
DBxref | PFAM:PF00172 |
DBxref | PFAM:PF11951 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:2633247..2635430 - |
|