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KYF_008085-T1, KYF_008085-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_008085-T1
Unique NameKYF_008085-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2643979..2644584+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_008085-T1 ID=KYF_008085-T1|Name=KYF_008085-T1|organism=Aspergillus niger KYF3|type=mRNA|length=606bp|location=Sequence derived from alignment at ch6:2643979..2644584+ (Aspergillus niger KYF3)
ATGCCTCAGGAAATCTCCGACATCAAGCAGTTCATCGAGGTCTGCCGCCG
CAAGGATGCGTCCTGTACGTTTACCCGACCTTTAGCCGCTTAGTTATCAT
GAGGTGGAAAGCTCCGCGGAGCTAGCTCTTTGAGGGGGAAGCTCGAGACG
GGTACCCGACTATCATCAAAAGGGCAAATTGGAATGGTTGATCGGGATGG
ATGAATGATAAGAAGTGGAGGCTAACGCGTGATGGTCTTGTCTTTCAAAC
AGCTGCTCGCATCAAGCGCAACCCCAAGGACCAGCAGATCAAGTTCAAGG
TCCGCTGCTCCCGCTTCGTCTACACCCTTGTCCTGAAGGACTCCGACAAG
GCCGACAAGCTCAAGCAGAGCCTGCCCCCTGGTGCGTTTGCTCCCGTCAC
CTGATCGACTGTTTCTTTGGATGGTGTTATGGAACAAGATACATGTCGTC
GGACGCGTTTGTTTCCTTACGACTTGAGATGGGCATTGATGTGGACCTCG
GCTATTGCATGACATCATTCGGATTGAGTACTAACATCAATTGTTTTCTC
ACACAGCTCTCAAGGTTGTCGACGTCTCCAAGGGAGACAAGAAGAAGGCT
CTGTAA
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Coding sequence (CDS) from alignment at ch6:2643979..2644584+

>KYF_008085-T1 ID=KYF_008085-T1|Name=KYF_008085-T1|organism=Aspergillus niger KYF3|type=CDS|length=729bp|location=Sequence derived from alignment at ch6:2643979..2644584+ (Aspergillus niger KYF3)
ATGCCTCAGGAAATCTCCGACATCAAGCAGTTCATCGAGGTCTGCCGCCG
CAAGGATGCGTCCTCTGCTCGCATCAAGCGCAACCCCAAGGACCAGCAGA
TCAAGTTCAAGGTCCGCTGCTCCCGCTTCGTCTACACCCTTGTCCTGAAG
GACTCCGACAAGGCCGACAAGCTCAAGCAGAGCCTGCCCCCTGCTCTCAA
GGTTGTCGACGTCTCCAAGGGAGACAAGAAGAAGGCTCTGTAAATGCCTC
AGGAAATCTCCGACATCAAGCAGTTCATCGAGGTCTGCCGCCGCAAGGAT
GCGTCCTCTGCTCGCATCAAGCGCAACCCCAAGGACCAGCAGATCAAGTT
CAAGGTCCGCTGCTCCCGCTTCGTCTACACCCTTGTCCTGAAGGACTCCG
ACAAGGCCGACAAGCTCAAGCAGAGCCTGCCCCCTGCTCTCAAGGTTGTC
GACGTCTCCAAGGGAGACAAGAAGAAGGCTCTGTAAATGCCTCAGGAAAT
CTCCGACATCAAGCAGTTCATCGAGGTCTGCCGCCGCAAGGATGCGTCCT
CTGCTCGCATCAAGCGCAACCCCAAGGACCAGCAGATCAAGTTCAAGGTC
CGCTGCTCCCGCTTCGTCTACACCCTTGTCCTGAAGGACTCCGACAAGGC
CGACAAGCTCAAGCAGAGCCTGCCCCCTGCTCTCAAGGTTGTCGACGTCT
CCAAGGGAGACAAGAAGAAGGCTCTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL38KYF_008085Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_008085-T1.exon1KYF_008085-T1.exon1Aspergillus niger KYF3exon
KYF_008085-T1.exon2KYF_008085-T1.exon2Aspergillus niger KYF3exon
KYF_008085-T1.exon3KYF_008085-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_008085-T1.cdsKYF_008085-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_008085-T1KYF_008085-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265OQH
DBxrefInterPro:IPR002675
DBxrefInterPro:IPR038464
DBxrefPFAM:PF01781
Product60S ribosomal protein L38
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2643979..2644584 +
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