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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3792465..3793519+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_008456-T1 ID=KYF_008456-T1|Name=KYF_008456-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1055bp|location=Sequence derived from alignment at ch6:3792465..3793519+ (Aspergillus niger KYF3)
ATGCCTATCACAGGGTAAGCGCTGATCAGTCATCACATATACTCACATCA
TGCTGACTCCAACCAACCAGAGTCTACTTCATCCCCTCCAACCCAAATGC
ATCCACAGGGCTAGCGACTATCACAGAGCGCCTACACACAGCCCTAGCAG
ACGAGCCAACATTAGTAGGCCGTTGGTTCCTCGAACACCGACTAATGCGC
GATACTCCATCATGTGTTCCTGCCTCAGCATCCCAGCGCCAAGTACAACC
GCGCTATATGCAATTCCTATCACTGTCTTTTCACTCTAACCACGGCTTCA
TCTACACCTCTGAAGCACTAGAGAAAAGCACTCATCATTCCACCACCAGT
GTTAGCACCACGCCAGCTGGCTCACCCACCAATTCTACTGCTCAAAGTGG
AGCTCCAGGCGCAACAGCGCCCACCCCTTCCACCCCATCTAATGCTGCTG
CACAGTCAGGAGGACCAATGGTGATGACCACCGTGCCGCTTCCATCCTGT
AATGCACTTTTCCAGCACTTCGGCTACGCCTGCCAGCCTTTCTGGTGCCA
TCGACACACGGTAACCGTACCAGGCGGTGTGGTCTACGATGTGGGCGATT
TCCGAGTCCGAGTGGGTGATGTACGACAGACTCAGCCAGCAGCGAGGGTG
CGCGGAACAGTTGTGGAAATTGAATGGCGGGGTCCGTGCATAGTTGATGC
GATTTCAGCACCACGGAATTCGAGCGACGGACAAATAGCTGATGATGGCG
ACTCCGGGATTGATATGGCGTTCCCGGATGCTATTGAAGACGCGGATATT
GATGCAGAGTATGCGGCTAGTGCGGCGTTGATTAGGGAGTTCTGGGCGAG
ACTCGGCATTGAAGGAGCCAGAGAAGCTATTTTGTTGCCGGATGTAGGCA
AGGAAGCCAAGGATCGGTTGAGGAGATTGAAGCAGAAGGGCCGAAATACT
GTTTCTAACGAGGCGAGTCTACAGCAAGCGGAGGAGGATCCGGATCCGGA
TGCGGGTGTGGATGTGGCGAGGCAGTTTATGGAGATTTTTAGGTTTAATC
GGTAA back to topCoding sequence (CDS) from alignment at ch6:3792465..3793519+ >KYF_008456-T1 ID=KYF_008456-T1|Name=KYF_008456-T1|organism=Aspergillus niger KYF3|type=CDS|length=1998bp|location=Sequence derived from alignment at ch6:3792465..3793519+ (Aspergillus niger KYF3)
ATGCCTATCACAGGAGTCTACTTCATCCCCTCCAACCCAAATGCATCCAC
AGGGCTAGCGACTATCACAGAGCGCCTACACACAGCCCTAGCAGACGAGC
CAACATTAGTAGGCCGTTGGTTCCTCGAACACCGACTAATGCGCGATACT
CCATCATGTGTTCCTGCCTCAGCATCCCAGCGCCAAGTACAACCGCGCTA
TATGCAATTCCTATCACTGTCTTTTCACTCTAACCACGGCTTCATCTACA
CCTCTGAAGCACTAGAGAAAAGCACTCATCATTCCACCACCAGTGTTAGC
ACCACGCCAGCTGGCTCACCCACCAATTCTACTGCTCAAAGTGGAGCTCC
AGGCGCAACAGCGCCCACCCCTTCCACCCCATCTAATGCTGCTGCACAGT
CAGGAGGACCAATGGTGATGACCACCGTGCCGCTTCCATCCTGTAATGCA
CTTTTCCAGCACTTCGGCTACGCCTGCCAGCCTTTCTGGTGCCATCGACA
CACGGTAACCGTACCAGGCGGTGTGGTCTACGATGTGGGCGATTTCCGAG
TCCGAGTGGGTGATGTACGACAGACTCAGCCAGCAGCGAGGGTGCGCGGA
ACAGTTGTGGAAATTGAATGGCGGGGTCCGTGCATAGTTGATGCGATTTC
AGCACCACGGAATTCGAGCGACGGACAAATAGCTGATGATGGCGACTCCG
GGATTGATATGGCGTTCCCGGATGCTATTGAAGACGCGGATATTGATGCA
GAGTATGCGGCTAGTGCGGCGTTGATTAGGGAGTTCTGGGCGAGACTCGG
CATTGAAGGAGCCAGAGAAGCTATTTTGTTGCCGGATGTAGGCAAGGAAG
CCAAGGATCGGTTGAGGAGATTGAAGCAGAAGGGCCGAAATACTGTTTCT
AACGAGGCGAGTCTACAGCAAGCGGAGGAGGATCCGGATCCGGATGCGGG
TGTGGATGTGGCGAGGCAGTTTATGGAGATTTTTAGGTTTAATCGGTAAA
TGCCTATCACAGGAGTCTACTTCATCCCCTCCAACCCAAATGCATCCACA
GGGCTAGCGACTATCACAGAGCGCCTACACACAGCCCTAGCAGACGAGCC
AACATTAGTAGGCCGTTGGTTCCTCGAACACCGACTAATGCGCGATACTC
CATCATGTGTTCCTGCCTCAGCATCCCAGCGCCAAGTACAACCGCGCTAT
ATGCAATTCCTATCACTGTCTTTTCACTCTAACCACGGCTTCATCTACAC
CTCTGAAGCACTAGAGAAAAGCACTCATCATTCCACCACCAGTGTTAGCA
CCACGCCAGCTGGCTCACCCACCAATTCTACTGCTCAAAGTGGAGCTCCA
GGCGCAACAGCGCCCACCCCTTCCACCCCATCTAATGCTGCTGCACAGTC
AGGAGGACCAATGGTGATGACCACCGTGCCGCTTCCATCCTGTAATGCAC
TTTTCCAGCACTTCGGCTACGCCTGCCAGCCTTTCTGGTGCCATCGACAC
ACGGTAACCGTACCAGGCGGTGTGGTCTACGATGTGGGCGATTTCCGAGT
CCGAGTGGGTGATGTACGACAGACTCAGCCAGCAGCGAGGGTGCGCGGAA
CAGTTGTGGAAATTGAATGGCGGGGTCCGTGCATAGTTGATGCGATTTCA
GCACCACGGAATTCGAGCGACGGACAAATAGCTGATGATGGCGACTCCGG
GATTGATATGGCGTTCCCGGATGCTATTGAAGACGCGGATATTGATGCAG
AGTATGCGGCTAGTGCGGCGTTGATTAGGGAGTTCTGGGCGAGACTCGGC
ATTGAAGGAGCCAGAGAAGCTATTTTGTTGCCGGATGTAGGCAAGGAAGC
CAAGGATCGGTTGAGGAGATTGAAGCAGAAGGGCCGAAATACTGTTTCTA
ACGAGGCGAGTCTACAGCAAGCGGAGGAGGATCCGGATCCGGATGCGGGT
GTGGATGTGGCGAGGCAGTTTATGGAGATTTTTAGGTTTAATCGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003712 | transcription coregulator activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR013921 |
| DBxref | PFAM:PF08612 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3792465..3793519 + |
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