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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3800579..3801535+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_008460-T1 ID=KYF_008460-T1|Name=KYF_008460-T1|organism=Aspergillus niger KYF3|type=mRNA|length=957bp|location=Sequence derived from alignment at ch6:3800579..3801535+ (Aspergillus niger KYF3)
ATGGCGGATCGTTTCCCTTCATTGGAGGACTTCTCTGCGGGTGAGCAGCC
CGCATCATTCCCGCCAACACTACACAACACTAACCCCGGTGTCTAGGCCA
GACCGAAGTCGTCGAGACCAACGGTGCCTCTGATGAAAGTGACTTCCTAG
CTCGCGAACGGGCTATGCTCGGTGATGATGCAGAACAATTTGCGACTCCC
CAAGATCATGTCGCCGACGACGTAAACAATGACGACGACTTACTGGGAGG
TGCGGATGCCGCTCCGTCCGCGGGTGGTGTTGAGCCTCAGGAGATCGCTG
GATTCGAGTCTTCCTTCCCTGCTCTCGACACACAGAACGAGGTATGAGAT
ATGCTGGGTCTATTATCGGGGAGTACTCTAAAATAACCACCAATTCACAG
CAAGTTGCCCCTGGCGGCACAATCACTGGGTCGGGTGCCCCCTTTCCACC
TACTGGGTATTCCAACTACACAACTCAAGCCCCGGAGGAGGAGCCAGAGC
CCGTTAGGTAGGTCTCGTCATATATCAGCAGCCAGGCAATCCGTTCCTTG
ACTGTGTGTCATGTCGCTTGTAGGGGGTCCATGTGCTAATGGAGATGTCT
TGCAGGGAATGGCGTGAGCGGCGAGATGCGGATATCCAACGTCGTGCGGA
GATCTCGGAGGAGAAGAAGGAATCTACCATAAAGAAGGCGCGCGAGGATA
TTGATGACTTTTATGTCTCATACAACAACAAGACGGACAAGCTTCGTGCC
CAAACCCGCGCTGAGGCAGATCAGTTCCTGTCCAACCGGGAGGACACTTC
TTCTGGAGGTACTAGCTGGGAACGCATTGCCAAGCTTGTCGACGTCTCCG
GAAAGGGAACCAAGGGTGGTGCCAGCGGTTCTGGTAAGGAGCGCTTCCGA
GAGCTGCTCCTTGATCTTAAGAAGGACCAGAATGCCCCCGGTGTCAGCGG
CGTTTAA back to topCoding sequence (CDS) from alignment at ch6:3800579..3801535+ >KYF_008460-T1 ID=KYF_008460-T1|Name=KYF_008460-T1|organism=Aspergillus niger KYF3|type=CDS|length=2976bp|location=Sequence derived from alignment at ch6:3800579..3801535+ (Aspergillus niger KYF3)
ATGGCGGATCGTTTCCCTTCATTGGAGGACTTCTCTGCGGGCCAGACCGA
AGTCGTCGAGACCAACGGTGCCTCTGATGAAAGTGACTTCCTAGCTCGCG
AACGGGCTATGCTCGGTGATGATGCAGAACAATTTGCGACTCCCCAAGAT
CATGTCGCCGACGACGTAAACAATGACGACGACTTACTGGGAGGTGCGGA
TGCCGCTCCGTCCGCGGGTGGTGTTGAGCCTCAGGAGATCGCTGGATTCG
AGTCTTCCTTCCCTGCTCTCGACACACAGAACGAGCAAGTTGCCCCTGGC
GGCACAATCACTGGGTCGGGTGCCCCCTTTCCACCTACTGGGTATTCCAA
CTACACAACTCAAGCCCCGGAGGAGGAGCCAGAGCCCGTTAGGGAATGGC
GTGAGCGGCGAGATGCGGATATCCAACGTCGTGCGGAGATCTCGGAGGAG
AAGAAGGAATCTACCATAAAGAAGGCGCGCGAGGATATTGATGACTTTTA
TGTCTCATACAACAACAAGACGGACAAGCTTCGTGCCCAAACCCGCGCTG
AGGCAGATCAGTTCCTGTCCAACCGGGAGGACACTTCTTCTGGAGGTACT
AGCTGGGAACGCATTGCCAAGCTTGTCGACGTCTCCGGAAAGGGAACCAA
GGGTGGTGCCAGCGGTTCTGGTAAGGAGCGCTTCCGAGAGCTGCTCCTTG
ATCTTAAGAAGGACCAGAATGCCCCCGGTGTCAGCGGCGTTTAAATGGCG
GATCGTTTCCCTTCATTGGAGGACTTCTCTGCGGGCCAGACCGAAGTCGT
CGAGACCAACGGTGCCTCTGATGAAAGTGACTTCCTAGCTCGCGAACGGG
CTATGCTCGGTGATGATGCAGAACAATTTGCGACTCCCCAAGATCATGTC
GCCGACGACGTAAACAATGACGACGACTTACTGGGAGGTGCGGATGCCGC
TCCGTCCGCGGGTGGTGTTGAGCCTCAGGAGATCGCTGGATTCGAGTCTT
CCTTCCCTGCTCTCGACACACAGAACGAGCAAGTTGCCCCTGGCGGCACA
ATCACTGGGTCGGGTGCCCCCTTTCCACCTACTGGGTATTCCAACTACAC
AACTCAAGCCCCGGAGGAGGAGCCAGAGCCCGTTAGGGAATGGCGTGAGC
GGCGAGATGCGGATATCCAACGTCGTGCGGAGATCTCGGAGGAGAAGAAG
GAATCTACCATAAAGAAGGCGCGCGAGGATATTGATGACTTTTATGTCTC
ATACAACAACAAGACGGACAAGCTTCGTGCCCAAACCCGCGCTGAGGCAG
ATCAGTTCCTGTCCAACCGGGAGGACACTTCTTCTGGAGGTACTAGCTGG
GAACGCATTGCCAAGCTTGTCGACGTCTCCGGAAAGGGAACCAAGGGTGG
TGCCAGCGGTTCTGGTAAGGAGCGCTTCCGAGAGCTGCTCCTTGATCTTA
AGAAGGACCAGAATGCCCCCGGTGTCAGCGGCGTTTAAATGGCGGATCGT
TTCCCTTCATTGGAGGACTTCTCTGCGGGCCAGACCGAAGTCGTCGAGAC
CAACGGTGCCTCTGATGAAAGTGACTTCCTAGCTCGCGAACGGGCTATGC
TCGGTGATGATGCAGAACAATTTGCGACTCCCCAAGATCATGTCGCCGAC
GACGTAAACAATGACGACGACTTACTGGGAGGTGCGGATGCCGCTCCGTC
CGCGGGTGGTGTTGAGCCTCAGGAGATCGCTGGATTCGAGTCTTCCTTCC
CTGCTCTCGACACACAGAACGAGCAAGTTGCCCCTGGCGGCACAATCACT
GGGTCGGGTGCCCCCTTTCCACCTACTGGGTATTCCAACTACACAACTCA
AGCCCCGGAGGAGGAGCCAGAGCCCGTTAGGGAATGGCGTGAGCGGCGAG
ATGCGGATATCCAACGTCGTGCGGAGATCTCGGAGGAGAAGAAGGAATCT
ACCATAAAGAAGGCGCGCGAGGATATTGATGACTTTTATGTCTCATACAA
CAACAAGACGGACAAGCTTCGTGCCCAAACCCGCGCTGAGGCAGATCAGT
TCCTGTCCAACCGGGAGGACACTTCTTCTGGAGGTACTAGCTGGGAACGC
ATTGCCAAGCTTGTCGACGTCTCCGGAAAGGGAACCAAGGGTGGTGCCAG
CGGTTCTGGTAAGGAGCGCTTCCGAGAGCTGCTCCTTGATCTTAAGAAGG
ACCAGAATGCCCCCGGTGTCAGCGGCGTTTAAATGGCGGATCGTTTCCCT
TCATTGGAGGACTTCTCTGCGGGCCAGACCGAAGTCGTCGAGACCAACGG
TGCCTCTGATGAAAGTGACTTCCTAGCTCGCGAACGGGCTATGCTCGGTG
ATGATGCAGAACAATTTGCGACTCCCCAAGATCATGTCGCCGACGACGTA
AACAATGACGACGACTTACTGGGAGGTGCGGATGCCGCTCCGTCCGCGGG
TGGTGTTGAGCCTCAGGAGATCGCTGGATTCGAGTCTTCCTTCCCTGCTC
TCGACACACAGAACGAGCAAGTTGCCCCTGGCGGCACAATCACTGGGTCG
GGTGCCCCCTTTCCACCTACTGGGTATTCCAACTACACAACTCAAGCCCC
GGAGGAGGAGCCAGAGCCCGTTAGGGAATGGCGTGAGCGGCGAGATGCGG
ATATCCAACGTCGTGCGGAGATCTCGGAGGAGAAGAAGGAATCTACCATA
AAGAAGGCGCGCGAGGATATTGATGACTTTTATGTCTCATACAACAACAA
GACGGACAAGCTTCGTGCCCAAACCCGCGCTGAGGCAGATCAGTTCCTGT
CCAACCGGGAGGACACTTCTTCTGGAGGTACTAGCTGGGAACGCATTGCC
AAGCTTGTCGACGTCTCCGGAAAGGGAACCAAGGGTGGTGCCAGCGGTTC
TGGTAAGGAGCGCTTCCGAGAGCTGCTCCTTGATCTTAAGAAGGACCAGA
ATGCCCCCGGTGTCAGCGGCGTTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030132 | clathrin coat of coated pit |
| GO:0030130 | clathrin coat of trans-Golgi network vesicle |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005198 | structural molecule activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
| GO:0006886 | intracellular protein transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | BUSCO:EOG09264XOC |
| DBxref | InterPro:IPR000996 |
| DBxref | PFAM:PF01086 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3800579..3801535 + |
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